Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14090

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,153,315	+		PFLU_RS14080	0.52	+0.8
3,153,315	+		PFLU_RS14080	0.52	-0.9
3,153,316	-		PFLU_RS14080	0.53	-0.1
3,153,316	-		PFLU_RS14080	0.53	+0.4
3,153,316	-		PFLU_RS14080	0.53	+0.3
3,153,316	-		PFLU_RS14080	0.53	+0.5
3,153,469	+		PFLU_RS14080	0.67	+0.4
3,153,469	+		PFLU_RS14080	0.67	+0.7
3,153,471	+		PFLU_RS14080	0.67	+0.3
3,153,472	-		PFLU_RS14080	0.67	+0.6
3,153,472	-		PFLU_RS14080	0.67	+0.2
3,153,472	-		PFLU_RS14080	0.67	+0.3
3,153,472	-		PFLU_RS14080	0.67	+0.7
3,153,472	-		PFLU_RS14080	0.67	+0.3
3,153,472	-		PFLU_RS14080	0.67	+0.9
3,153,472	-		PFLU_RS14080	0.67	+0.2
3,153,472	-		PFLU_RS14080	0.67	+0.1
3,153,665	+		PFLU_RS14080	0.85	-0.6
3,153,665	+		PFLU_RS14080	0.85	-0.3
3,153,665	+		PFLU_RS14080	0.85	-0.0
3,153,665	+		PFLU_RS14080	0.85	+0.7
3,153,666	-		PFLU_RS14080	0.85	+0.0
3,153,666	-		PFLU_RS14080	0.85	+0.2
3,153,666	-		PFLU_RS14080	0.85	+0.9
3,153,666	-		PFLU_RS14080	0.85	+0.1
3,153,669	+		PFLU_RS14080	0.85	-0.0
3,153,669	+		PFLU_RS14080	0.85	-0.4
3,153,670	-		PFLU_RS14080	0.85	-0.2
3,153,670	-		PFLU_RS14080	0.85	+0.7
3,153,670	-		PFLU_RS14080	0.85	+1.0
3,153,779	+				+0.4
3,153,780	-				+0.4
3,153,818	+				+0.7
3,153,866	+				+0.7
3,153,881	-				-1.0
3,153,962	-				-0.1
3,153,980	+				+0.5
3,154,031	+				-0.5
3,154,031	+				+0.5
3,154,031	+				-1.0
3,154,032	-		PFLU_RS14085	0.10	-1.2
3,154,032	-		PFLU_RS14085	0.10	+0.2
3,154,038	+		PFLU_RS14085	0.13	-0.0
3,154,041	+		PFLU_RS14085	0.14	-0.0
3,154,042	-		PFLU_RS14085	0.15	-0.0
3,154,046	+		PFLU_RS14085	0.17	-0.1
3,154,081	+		PFLU_RS14085	0.34	+0.6
3,154,081	+		PFLU_RS14085	0.34	+0.2
3,154,082	-		PFLU_RS14085	0.35	+1.7
3,154,109	-		PFLU_RS14085	0.48	+0.4
3,154,125	+		PFLU_RS14085	0.56	+0.4
3,154,126	-		PFLU_RS14085	0.57	-2.1
3,154,126	-		PFLU_RS14085	0.57	+1.0
3,154,126	-		PFLU_RS14085	0.57	-0.3
3,154,129	-		PFLU_RS14085	0.58	+0.5
3,154,129	-		PFLU_RS14085	0.58	-0.5
3,154,141	+		PFLU_RS14085	0.64	-0.5
3,154,141	+		PFLU_RS14085	0.64	-0.7
3,154,141	+		PFLU_RS14085	0.64	+0.2
3,154,141	+		PFLU_RS14085	0.64	-0.2
3,154,141	+		PFLU_RS14085	0.64	+0.6
3,154,141	+		PFLU_RS14085	0.64	+1.2
3,154,142	-		PFLU_RS14085	0.65	+0.2
3,154,142	-		PFLU_RS14085	0.65	+0.3
3,154,142	-		PFLU_RS14085	0.65	+0.8
3,154,146	-		PFLU_RS14085	0.67	+0.6
3,154,156	-		PFLU_RS14085	0.72	+0.2
3,154,156	-		PFLU_RS14085	0.72	+0.4
3,154,210	+				-0.2
3,154,211	-				+0.9
3,154,214	+				-1.4
3,154,214	+				-0.6
3,154,214	+				+0.2
3,154,214	+				-1.6
3,154,214	+				-0.3
3,154,214	+				+1.0
3,154,214	+				+0.7
3,154,214	+				+1.9
3,154,214	+				+0.1
3,154,214	+				+1.2
3,154,214	+				-0.7
3,154,215	-				-0.2
3,154,215	-				+0.4
3,154,215	-				+1.2
3,154,215	-				-0.3
3,154,215	-				-1.0
3,154,215	-				+0.7
3,154,216	+				+0.2
3,154,216	+				+0.3
3,154,216	+				-0.1
3,154,216	+				+0.0
3,154,216	+				+0.4
3,154,216	+				+1.1
3,154,216	+				+0.5
3,154,216	+				-0.3
3,154,216	+				-0.0
3,154,216	+				+0.9
3,154,216	+				+0.6
3,154,216	+				+0.1
3,154,216	+				+0.2
3,154,216	+				+0.1
3,154,216	+				-0.2
3,154,217	-				+0.5
3,154,217	-				-0.7
3,154,217	-				+0.7
3,154,217	-				+0.1
3,154,217	-				-0.5
3,154,217	-				+0.9
3,154,217	-				-0.2
3,154,217	-				+1.5
3,154,217	-				-1.5
3,154,217	-				+0.1
3,154,217	-				+0.9
3,154,217	-				-0.6
3,154,217	-				-0.3
3,154,217	-				+0.7
3,154,217	-				+0.2
3,154,217	-				+0.8
3,154,217	-				+1.1
3,154,218	+				+0.2
3,154,218	+				-0.5
3,154,218	+				+0.5
3,154,218	+				-0.1
3,154,218	+				-0.4
3,154,219	-				-1.5
3,154,219	-				-0.2
3,154,219	-				+0.2
3,154,219	-				-2.7
3,154,271	+				-0.6
3,154,271	+				+0.3
3,154,271	+				-0.1
3,154,272	-				+1.2
3,154,272	-				+0.6
3,154,405	-		PFLU_RS14090	0.24	-0.4
3,154,418	+		PFLU_RS14090	0.27	+0.3
3,154,497	+		PFLU_RS14090	0.46	+0.5
3,154,498	-		PFLU_RS14090	0.46	+0.7
3,154,498	-		PFLU_RS14090	0.46	-0.1
3,154,551	+		PFLU_RS14090	0.59	+0.6
3,154,551	+		PFLU_RS14090	0.59	+0.5
3,154,551	+		PFLU_RS14090	0.59	+0.7
3,154,552	-		PFLU_RS14090	0.59	+1.7
3,154,552	-		PFLU_RS14090	0.59	-0.8
3,154,552	-		PFLU_RS14090	0.59	+0.9
3,154,552	-		PFLU_RS14090	0.59	-0.7
3,154,552	-		PFLU_RS14090	0.59	+0.0
3,154,552	-		PFLU_RS14090	0.59	+0.4
3,154,671	-		PFLU_RS14090	0.87	+0.3
3,154,695	+				-0.8
3,154,695	+				+0.2
3,154,695	+				-0.2
3,154,695	+				+0.4
3,154,696	-				-0.2
3,154,696	-				-0.8
3,154,696	-				-0.8
3,154,696	-				+0.4
3,154,696	-				-0.6
3,154,696	-				-0.7
3,154,699	+				-0.0
3,154,699	+				+0.2
3,154,699	+				-0.5
3,154,700	-				-1.7
3,154,700	-				-1.6
3,154,700	-				-0.3
3,154,707	+				+0.3
3,154,707	+				-0.3
3,154,707	+				+0.1
3,154,707	+				-0.5
3,154,708	-				+0.6
3,154,708	-				+0.0
3,154,708	-				+0.7
3,154,708	-				+0.6
3,154,716	+				+0.6
3,154,717	-				+0.7
3,154,717	-				+0.9
3,154,801	+				-0.4
3,154,801	+				-0.3
3,154,801	+				+0.7
3,154,801	+				+0.8
3,154,802	-				+0.9
3,154,802	-				+0.4
3,154,802	-				+0.6
3,154,802	-				-0.3
3,154,872	-		PFLU_RS14095	0.15	+0.1
3,155,011	+		PFLU_RS14095	0.39	-0.2
3,155,012	-		PFLU_RS14095	0.39	-0.0
3,155,028	+		PFLU_RS14095	0.42	+0.9
3,155,028	+		PFLU_RS14095	0.42	+0.2
3,155,030	+		PFLU_RS14095	0.42	+1.0
3,155,030	+		PFLU_RS14095	0.42	+0.1
3,155,030	+		PFLU_RS14095	0.42	-0.5
3,155,030	+		PFLU_RS14095	0.42	-1.8
3,155,030	+		PFLU_RS14095	0.42	+0.9
3,155,030	+		PFLU_RS14095	0.42	-0.2
3,155,030	+		PFLU_RS14095	0.42	+0.6
3,155,030	+		PFLU_RS14095	0.42	-0.3
3,155,030	+		PFLU_RS14095	0.42	+0.3
3,155,030	+		PFLU_RS14095	0.42	-1.1
3,155,030	+		PFLU_RS14095	0.42	+0.4
3,155,030	+		PFLU_RS14095	0.42	+0.8
3,155,030	+		PFLU_RS14095	0.42	+0.1
3,155,030	+		PFLU_RS14095	0.42	-0.4
3,155,030	+		PFLU_RS14095	0.42	+0.8
3,155,030	+		PFLU_RS14095	0.42	+1.0
3,155,030	+		PFLU_RS14095	0.42	-1.0
3,155,030	+		PFLU_RS14095	0.42	+0.3
3,155,030	+		PFLU_RS14095	0.42	+0.2
3,155,030	+		PFLU_RS14095	0.42	-0.6
3,155,030	+		PFLU_RS14095	0.42	+1.1
3,155,031	-		PFLU_RS14095	0.42	-1.1
3,155,031	-		PFLU_RS14095	0.42	-0.3
3,155,031	-		PFLU_RS14095	0.42	+0.2
3,155,031	-		PFLU_RS14095	0.42	+0.3
3,155,031	-		PFLU_RS14095	0.42	+0.3
3,155,031	-		PFLU_RS14095	0.42	+0.3
3,155,031	-		PFLU_RS14095	0.42	+0.1
3,155,031	-		PFLU_RS14095	0.42	-0.0
3,155,031	-		PFLU_RS14095	0.42	-0.3
3,155,031	-		PFLU_RS14095	0.42	-0.1
3,155,031	-		PFLU_RS14095	0.42	+0.6
3,155,031	-		PFLU_RS14095	0.42	-0.2
3,155,031	-		PFLU_RS14095	0.42	-0.5
3,155,031	-		PFLU_RS14095	0.42	+1.2
3,155,031	-		PFLU_RS14095	0.42	-0.2
3,155,031	-		PFLU_RS14095	0.42	+0.7
3,155,031	-		PFLU_RS14095	0.42	-0.1
3,155,031	-		PFLU_RS14095	0.42	+0.2
3,155,031	-		PFLU_RS14095	0.42	-0.2
3,155,031	-		PFLU_RS14095	0.42	+0.2
3,155,031	-		PFLU_RS14095	0.42	+0.2
3,155,031	-		PFLU_RS14095	0.42	-1.0
3,155,127	+		PFLU_RS14095	0.58	+0.2
3,155,128	-		PFLU_RS14095	0.59	-0.2
3,155,151	-		PFLU_RS14095	0.62	+0.7
3,155,151	-		PFLU_RS14095	0.62	+1.0
3,155,338	-				+0.3
3,155,353	+				-0.0
3,155,353	+				-0.2
3,155,353	+				+0.4
3,155,354	-				+0.2
3,155,354	-				-0.6
3,155,354	-				+0.4
3,155,371	+				-1.1
3,155,371	+				-0.1
3,155,371	+				+0.5
3,155,371	+				-0.3
3,155,371	+				-0.4
3,155,371	+				-0.4
3,155,371	+				+0.3
3,155,371	+				+0.5
3,155,371	+				+0.3
3,155,372	-				+0.7
3,155,372	-				-0.2
3,155,372	-				-0.7
3,155,372	-				-3.2
3,155,372	-				-1.1
3,155,372	-				+0.2
3,155,372	-				+0.4
3,155,372	-				-0.1
3,155,372	-				-0.3
3,155,372	-				+0.3
3,155,372	-				-0.2
3,155,375	+				+0.1
3,155,375	+				+1.2
3,155,376	-				+0.9
3,155,385	-				+0.3
3,155,460	+				-0.2
3,155,461	-				+0.7
3,155,499	-				-0.5
3,155,582	+				+0.8
3,155,582	+				+1.2
3,155,583	-				-1.6
3,155,654	+				+1.2
3,155,654	+				-1.2
3,155,654	+				+0.1
3,155,654	+				+0.4
3,155,655	-				+0.3
3,155,655	-				+0.3
3,155,680	+				-0.5
3,155,681	-				+0.5
3,155,691	+				+0.7
3,155,691	+				-0.2
3,155,691	+				-0.3
3,155,691	+				-0.5
3,155,692	-				+0.6
3,155,692	-				+0.4
3,155,692	-				+0.5
3,155,692	-				+0.3
3,155,692	-				+0.3