Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10810

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
2,379,358	+		PFLU_RS10800	0.66	+1.3
2,379,359	-		PFLU_RS10800	0.66	-0.2
2,379,359	-		PFLU_RS10800	0.66	+0.3
2,379,377	+		PFLU_RS10800	0.68	-0.2
2,379,378	-		PFLU_RS10800	0.68	-0.4
2,379,379	+		PFLU_RS10800	0.68	+0.5
2,379,379	+		PFLU_RS10800	0.68	+1.0
2,379,379	+		PFLU_RS10800	0.68	-0.8
2,379,379	+		PFLU_RS10800	0.68	+0.8
2,379,379	+		PFLU_RS10800	0.68	+0.4
2,379,379	+		PFLU_RS10800	0.68	+0.4
2,379,380	-		PFLU_RS10800	0.68	+0.5
2,379,380	-		PFLU_RS10800	0.68	-0.3
2,379,380	-		PFLU_RS10800	0.68	+0.6
2,379,380	-		PFLU_RS10800	0.68	-0.9
2,379,380	-		PFLU_RS10800	0.68	+0.7
2,379,380	-		PFLU_RS10800	0.68	-0.1
2,379,380	-		PFLU_RS10800	0.68	-0.4
2,379,380	-		PFLU_RS10800	0.68	+1.3
2,379,393	+		PFLU_RS10800	0.69	-0.3
2,379,393	+		PFLU_RS10800	0.69	+1.0
2,379,393	+		PFLU_RS10800	0.69	+0.5
2,379,393	+		PFLU_RS10800	0.69	-0.8
2,379,393	+		PFLU_RS10800	0.69	+0.1
2,379,393	+		PFLU_RS10800	0.69	+0.6
2,379,393	+		PFLU_RS10800	0.69	-0.4
2,379,393	+		PFLU_RS10800	0.69	-0.1
2,379,393	+		PFLU_RS10800	0.69	+0.0
2,379,393	+		PFLU_RS10800	0.69	-0.4
2,379,393	+		PFLU_RS10800	0.69	-0.9
2,379,393	+		PFLU_RS10800	0.69	-0.1
2,379,393	+		PFLU_RS10800	0.69	-1.0
2,379,393	+		PFLU_RS10800	0.69	-0.2
2,379,393	+		PFLU_RS10800	0.69	-1.9
2,379,393	+		PFLU_RS10800	0.69	+0.8
2,379,393	+		PFLU_RS10800	0.69	+0.2
2,379,393	+		PFLU_RS10800	0.69	-0.7
2,379,394	-		PFLU_RS10800	0.69	-0.4
2,379,394	-		PFLU_RS10800	0.69	-0.5
2,379,394	-		PFLU_RS10800	0.69	+0.6
2,379,394	-		PFLU_RS10800	0.69	-0.4
2,379,394	-		PFLU_RS10800	0.69	-0.3
2,379,394	-		PFLU_RS10800	0.69	+0.1
2,379,394	-		PFLU_RS10800	0.69	+1.2
2,379,394	-		PFLU_RS10800	0.69	+0.8
2,379,394	-		PFLU_RS10800	0.69	-0.5
2,379,394	-		PFLU_RS10800	0.69	+0.1
2,379,394	-		PFLU_RS10800	0.69	-0.6
2,379,394	-		PFLU_RS10800	0.69	-0.5
2,379,394	-		PFLU_RS10800	0.69	+0.6
2,379,394	-		PFLU_RS10800	0.69	+0.5
2,379,394	-		PFLU_RS10800	0.69	+0.4
2,379,394	-		PFLU_RS10800	0.69	+0.2
2,379,394	-		PFLU_RS10800	0.69	-0.7
2,379,394	-		PFLU_RS10800	0.69	-0.3
2,379,487	+		PFLU_RS10800	0.76	-1.1
2,379,487	+		PFLU_RS10800	0.76	+1.9
2,379,487	+		PFLU_RS10800	0.76	+1.0
2,379,487	+		PFLU_RS10800	0.76	+0.3
2,379,488	-		PFLU_RS10800	0.76	+0.1
2,379,488	-		PFLU_RS10800	0.76	-1.2
2,379,488	-		PFLU_RS10800	0.76	-0.8
2,379,488	-		PFLU_RS10800	0.76	+0.9
2,379,488	-		PFLU_RS10800	0.76	-0.2
2,379,488	-		PFLU_RS10800	0.76	-0.6
2,379,488	-		PFLU_RS10800	0.76	-0.7
2,379,488	-		PFLU_RS10800	0.76	-0.1
2,379,514	+		PFLU_RS10800	0.78	+0.2
2,379,514	+		PFLU_RS10800	0.78	+0.5
2,379,515	-		PFLU_RS10800	0.78	-0.3
2,379,525	+		PFLU_RS10800	0.79	+0.1
2,379,565	+		PFLU_RS10800	0.82	-0.7
2,379,566	-		PFLU_RS10800	0.82	+0.8
2,379,566	-		PFLU_RS10800	0.82	+0.8
2,379,701	-				-0.1
2,379,701	-				-0.0
2,379,701	-				-0.1
2,379,733	-				+0.6
2,379,839	+				-0.3
2,379,839	+				+0.0
2,379,840	-				+0.2
2,379,840	-				+0.1
2,379,840	-				-0.8
2,379,840	-				-0.2
2,379,840	-				+0.2
2,379,840	-				-1.0
2,379,882	-		PFLU_RS10805	0.16	-0.2
2,379,883	+		PFLU_RS10805	0.16	+0.4
2,379,883	+		PFLU_RS10805	0.16	+0.4
2,379,883	+		PFLU_RS10805	0.16	-0.3
2,379,884	-		PFLU_RS10805	0.16	-0.2
2,379,925	+		PFLU_RS10805	0.25	-2.7
2,379,925	+		PFLU_RS10805	0.25	-1.3
2,379,926	-		PFLU_RS10805	0.25	+0.2
2,379,926	-		PFLU_RS10805	0.25	+0.3
2,379,980	-		PFLU_RS10805	0.37	-0.2
2,380,016	+		PFLU_RS10805	0.44	+0.1
2,380,016	+		PFLU_RS10805	0.44	-0.5
2,380,016	+		PFLU_RS10805	0.44	+0.3
2,380,018	+		PFLU_RS10805	0.45	-0.2
2,380,018	+		PFLU_RS10805	0.45	+0.3
2,380,018	+		PFLU_RS10805	0.45	-0.4
2,380,018	+		PFLU_RS10805	0.45	+0.3
2,380,018	+		PFLU_RS10805	0.45	-0.1
2,380,019	-		PFLU_RS10805	0.45	-1.3
2,380,019	-		PFLU_RS10805	0.45	+0.6
2,380,019	-		PFLU_RS10805	0.45	+0.6
2,380,019	-		PFLU_RS10805	0.45	+0.8
2,380,019	-		PFLU_RS10805	0.45	+0.7
2,380,027	+		PFLU_RS10805	0.47	+0.3
2,380,027	+		PFLU_RS10805	0.47	-0.2
2,380,120	+		PFLU_RS10805	0.67	-1.8
2,380,152	+		PFLU_RS10805	0.74	+1.2
2,380,153	-		PFLU_RS10805	0.74	+0.5
2,380,190	+		PFLU_RS10805	0.82	+0.4
2,380,202	+		PFLU_RS10805	0.84	+0.0
2,380,307	+				-0.6
2,380,308	+				-0.2
2,380,308	+				-0.2
2,380,308	+				-0.0
2,380,308	+				+0.2
2,380,308	+				+0.5
2,380,308	+				-1.0
2,380,308	+				+0.5
2,380,308	+				-0.9
2,380,308	+				+1.3
2,380,308	+				-0.1
2,380,308	+				-0.1
2,380,309	-				-0.1
2,380,309	-				+0.2
2,380,309	-				-1.2
2,380,309	-				-1.2
2,380,309	-				+0.9
2,380,309	-				-0.1
2,380,309	-				+0.2
2,380,309	-				-1.0
2,380,368	+				-0.5
2,380,414	+		PFLU_RS10810	0.11	+0.3
2,380,414	+		PFLU_RS10810	0.11	+0.7
2,380,415	-		PFLU_RS10810	0.11	+0.4
2,380,415	-		PFLU_RS10810	0.11	+0.4
2,380,461	+		PFLU_RS10810	0.14	+0.7
2,380,461	+		PFLU_RS10810	0.14	-0.5
2,380,461	+		PFLU_RS10810	0.14	-0.2
2,380,461	+		PFLU_RS10810	0.14	-0.1
2,380,462	-		PFLU_RS10810	0.14	-2.1
2,380,462	-		PFLU_RS10810	0.14	-0.1
2,380,496	+		PFLU_RS10810	0.17	+0.0
2,380,496	+		PFLU_RS10810	0.17	-0.3
2,380,497	-		PFLU_RS10810	0.17	+0.4
2,380,497	-		PFLU_RS10810	0.17	-2.4
2,380,524	+		PFLU_RS10810	0.19	-0.1
2,380,524	+		PFLU_RS10810	0.19	-0.4
2,380,578	-		PFLU_RS10810	0.23	-0.3
2,380,597	+		PFLU_RS10810	0.25	-1.3
2,380,744	-		PFLU_RS10810	0.36	-0.1
2,380,754	+		PFLU_RS10810	0.37	+0.2
2,380,845	-		PFLU_RS10810	0.44	-0.4
2,380,845	-		PFLU_RS10810	0.44	+0.5
2,380,845	-		PFLU_RS10810	0.44	+0.2
2,380,926	+		PFLU_RS10810	0.50	+0.2
2,380,926	+		PFLU_RS10810	0.50	+0.1
2,380,926	+		PFLU_RS10810	0.50	-1.5
2,380,929	+		PFLU_RS10810	0.50	-0.1
2,380,929	+		PFLU_RS10810	0.50	-0.8
2,380,929	+		PFLU_RS10810	0.50	+1.6
2,380,929	+		PFLU_RS10810	0.50	-0.6
2,380,929	+		PFLU_RS10810	0.50	-0.5
2,380,930	-		PFLU_RS10810	0.50	+0.3
2,380,930	-		PFLU_RS10810	0.50	+0.3
2,380,930	-		PFLU_RS10810	0.50	+0.5
2,380,930	-		PFLU_RS10810	0.50	-0.1
2,380,930	-		PFLU_RS10810	0.50	+1.0
2,380,930	-		PFLU_RS10810	0.50	-0.0
2,380,985	-		PFLU_RS10810	0.54	+0.1
2,381,014	+		PFLU_RS10810	0.57	+0.3
2,381,023	+		PFLU_RS10810	0.57	-0.6
2,381,023	+		PFLU_RS10810	0.57	+0.2
2,381,024	-		PFLU_RS10810	0.57	+0.1
2,381,158	+		PFLU_RS10810	0.68	-0.7
2,381,158	+		PFLU_RS10810	0.68	-0.8
2,381,159	-		PFLU_RS10810	0.68	-0.1
2,381,159	-		PFLU_RS10810	0.68	-2.3
2,381,227	+		PFLU_RS10810	0.73	+0.4
2,381,237	+		PFLU_RS10810	0.74	-0.1
2,381,238	-		PFLU_RS10810	0.74	+0.3
2,381,327	+		PFLU_RS10810	0.80	+0.1
2,381,335	+		PFLU_RS10810	0.81	+0.7
2,381,335	+		PFLU_RS10810	0.81	+0.5
2,381,335	+		PFLU_RS10810	0.81	-0.2
2,381,370	-		PFLU_RS10810	0.84	-0.7
2,381,378	-		PFLU_RS10810	0.84	+1.2
2,381,378	-		PFLU_RS10810	0.84	+0.9
2,381,415	+		PFLU_RS10810	0.87	-0.2
2,381,416	-		PFLU_RS10810	0.87	+0.3
2,381,416	-		PFLU_RS10810	0.87	+0.5
2,381,416	-		PFLU_RS10810	0.87	-0.4
2,381,416	-		PFLU_RS10810	0.87	+0.2
2,381,485	+				-0.6
2,381,486	-				-0.1
2,381,517	+				+0.5
2,381,518	-				-0.8
2,381,518	-				-0.9
2,381,518	-				-0.4
2,381,518	-				+0.3
2,381,518	-				+0.1
2,381,518	-				+0.2
2,381,520	-				+0.0
2,381,520	-				-0.2
2,381,563	+				-0.4
2,381,618	+				-0.0
2,381,619	-				+0.3
2,381,630	-				+0.3
2,381,652	-				-0.5
2,381,760	+				+0.3
2,381,761	-				+0.2
2,381,766	-				+0.4
2,381,791	-				+0.0
2,381,810	+				+0.6
2,381,811	-				+0.2
2,381,811	-				+0.7
2,381,811	-				+1.0
2,381,866	+				-0.1
2,381,866	+				+0.4
2,381,866	+				-0.0
2,381,866	+				+0.2
2,381,866	+				+0.2
2,381,867	-				-1.3
2,381,867	-				+0.3
2,381,867	-				+0.1
2,381,867	-				+0.4
2,381,867	-				+0.7
2,381,867	-				-0.1
2,381,867	-				-0.5
2,381,867	-				-0.6
2,381,867	-				+1.5
2,381,897	+				+0.8
2,381,899	+				+0.4
2,381,899	+				+0.3
2,381,899	+				-0.1
2,381,899	+				+0.0
2,381,899	+				+0.0
2,381,899	+				+0.8
2,381,899	+				-0.3
2,381,899	+				+0.1
2,381,899	+				+0.1
2,381,899	+				+0.2
2,381,899	+				-0.1
2,381,900	-				-0.9
2,381,900	-				+1.0
2,381,900	-				+0.1
2,381,900	-				+0.8
2,381,900	-				+0.4
2,381,900	-				-0.8
2,381,900	-				+0.4
2,381,900	-				+2.0
2,381,900	-				-0.6
2,381,900	-				+0.2
2,381,900	-				+0.5
2,381,900	-				-0.0
2,381,903	+				-0.0
2,381,903	+				-0.2
2,381,903	+				-0.0
2,381,904	-				-0.1
2,381,904	-				-0.4
2,381,904	-				+0.5
2,382,062	+				+0.4
2,382,062	+				+1.2
2,382,062	+				-0.3
2,382,062	+				-1.0
2,382,063	-				-0.2
2,382,063	-				+0.1
2,382,063	-				+0.2
2,382,141	+				-0.8
2,382,186	+		PFLU_RS10815	0.11	+0.2
2,382,186	+		PFLU_RS10815	0.11	+0.4
2,382,219	-		PFLU_RS10815	0.14	-0.2
2,382,219	-		PFLU_RS10815	0.14	+0.2
2,382,219	-		PFLU_RS10815	0.14	-1.0
2,382,242	+		PFLU_RS10815	0.16	-0.1
2,382,242	+		PFLU_RS10815	0.16	-0.6
2,382,242	+		PFLU_RS10815	0.16	+0.3
2,382,242	+		PFLU_RS10815	0.16	+0.2
2,382,242	+		PFLU_RS10815	0.16	-1.3
2,382,243	-		PFLU_RS10815	0.16	-0.9
2,382,243	-		PFLU_RS10815	0.16	-0.0
2,382,243	-		PFLU_RS10815	0.16	+0.0
2,382,246	+		PFLU_RS10815	0.16	-0.1
2,382,247	-		PFLU_RS10815	0.16	-0.6
2,382,353	+		PFLU_RS10815	0.24	-0.5
2,382,353	+		PFLU_RS10815	0.24	+0.0
2,382,353	+		PFLU_RS10815	0.24	+0.2
2,382,353	+		PFLU_RS10815	0.24	+0.4
2,382,354	-		PFLU_RS10815	0.24	-0.4
2,382,354	-		PFLU_RS10815	0.24	-0.5