Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08890

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,969,660	+		PFLU_RS08885	0.31	+0.2
1,969,660	+		PFLU_RS08885	0.31	+0.9
1,969,661	-		PFLU_RS08885	0.32	+0.5
1,969,661	-		PFLU_RS08885	0.32	+0.2
1,969,661	-		PFLU_RS08885	0.32	-0.4
1,969,661	-		PFLU_RS08885	0.32	+0.1
1,969,696	-		PFLU_RS08885	0.35	+2.0
1,970,047	+		PFLU_RS08885	0.74	-0.3
1,970,047	+		PFLU_RS08885	0.74	+0.7
1,970,047	+		PFLU_RS08885	0.74	-1.2
1,970,047	+		PFLU_RS08885	0.74	-0.9
1,970,047	+		PFLU_RS08885	0.74	-0.6
1,970,047	+		PFLU_RS08885	0.74	+0.0
1,970,047	+		PFLU_RS08885	0.74	-0.5
1,970,048	-		PFLU_RS08885	0.74	-0.1
1,970,048	-		PFLU_RS08885	0.74	-0.1
1,970,048	-		PFLU_RS08885	0.74	+1.7
1,970,048	-		PFLU_RS08885	0.74	+0.1
1,970,048	-		PFLU_RS08885	0.74	+0.3
1,970,048	-		PFLU_RS08885	0.74	-0.9
1,970,048	-		PFLU_RS08885	0.74	+0.8
1,970,048	-		PFLU_RS08885	0.74	+1.5
1,970,217	+				+0.2
1,970,218	-				+0.5
1,970,218	-				-0.5
1,970,218	-				+0.1
1,970,342	+				-0.0
1,970,371	+				-0.4
1,970,371	+				+1.0
1,970,371	+				+0.4
1,970,371	+				+0.4
1,970,371	+				+0.3
1,970,372	-				+0.2
1,970,372	-				+1.9
1,970,372	-				-0.8
1,970,372	-				-0.4
1,970,375	+				-0.7
1,970,375	+				+0.6
1,970,375	+				-0.7
1,970,376	-				+0.3
1,970,376	-				+0.3
1,970,376	-				+0.7
1,970,376	-				+0.9
1,970,376	-				+0.5
1,970,405	-				-1.0
1,970,475	-				+0.4
1,970,547	+		PFLU_RS08890	0.21	+0.4
1,970,547	+		PFLU_RS08890	0.21	+0.7
1,970,549	+		PFLU_RS08890	0.22	-0.4
1,970,549	+		PFLU_RS08890	0.22	-1.2
1,970,549	+		PFLU_RS08890	0.22	-0.2
1,970,550	-		PFLU_RS08890	0.22	+0.0
1,970,550	-		PFLU_RS08890	0.22	+0.5
1,970,550	-		PFLU_RS08890	0.22	+2.0
1,970,550	-		PFLU_RS08890	0.22	-0.4
1,970,550	-		PFLU_RS08890	0.22	-0.3
1,970,550	-		PFLU_RS08890	0.22	-0.6
1,970,550	-		PFLU_RS08890	0.22	+0.4
1,970,672	-		PFLU_RS08890	0.50	-0.3
1,970,672	-		PFLU_RS08890	0.50	+0.3
1,970,700	+		PFLU_RS08890	0.57	+0.3
1,970,700	+		PFLU_RS08890	0.57	-0.6
1,970,701	-		PFLU_RS08890	0.57	+0.1
1,970,704	+		PFLU_RS08890	0.58	+0.3
1,970,735	+		PFLU_RS08890	0.65	-0.2
1,970,735	+		PFLU_RS08890	0.65	-0.8
1,970,736	-		PFLU_RS08890	0.65	-0.0
1,970,750	+		PFLU_RS08890	0.68	-1.2
1,970,751	-		PFLU_RS08890	0.69	-0.2
1,970,765	-		PFLU_RS08890	0.72	+0.7
1,970,777	+		PFLU_RS08890	0.75	-1.2
1,970,778	-		PFLU_RS08890	0.75	+0.3
1,970,778	-		PFLU_RS08890	0.75	-0.6
1,970,846	+				-0.6
1,970,875	-				+1.0
1,970,875	-				+0.7
1,970,886	+				+0.4
1,970,886	+				-0.1
1,970,887	-				+0.2
1,970,887	-				-0.7
1,970,888	+				-0.3
1,970,888	+				+0.8
1,970,889	-				-0.9
1,970,889	-				-0.5
1,970,889	-				+1.3
1,970,889	-				+0.3
1,970,889	-				-0.1
1,970,889	-				-0.3
1,970,958	-				+0.2
1,970,999	+				+0.8
1,971,000	-				+0.2
1,971,000	-				-0.3
1,971,041	+				-0.2
1,971,042	-				+0.4
1,971,078	+				+0.1
1,971,138	-				+0.1
1,971,159	-				+0.7
1,971,183	+				+0.9
1,971,183	+				+0.2
1,971,183	+				-0.3
1,971,183	+				+0.3
1,971,183	+				+0.7
1,971,184	-				-0.8
1,971,184	-				+1.0
1,971,184	-				-0.5
1,971,184	-				+1.0
1,971,184	-				+0.2
1,971,189	+				+0.5
1,971,190	-				-0.1
1,971,204	+				+0.9
1,971,205	-				-2.2
1,971,342	+		PFLU_RS08895	0.24	+0.3
1,971,342	+		PFLU_RS08895	0.24	+0.0
1,971,343	-		PFLU_RS08895	0.25	-1.4
1,971,426	+		PFLU_RS08895	0.35	-0.5
1,971,434	+		PFLU_RS08895	0.36	+0.6
1,971,654	+		PFLU_RS08895	0.64	+0.2
1,971,654	+		PFLU_RS08895	0.64	+0.2
1,971,654	+		PFLU_RS08895	0.64	+1.3
1,971,654	+		PFLU_RS08895	0.64	+0.5
1,971,654	+		PFLU_RS08895	0.64	-0.2
1,971,654	+		PFLU_RS08895	0.64	+0.6
1,971,654	+		PFLU_RS08895	0.64	+0.3
1,971,654	+		PFLU_RS08895	0.64	+0.2
1,971,654	+		PFLU_RS08895	0.64	+0.1
1,971,654	+		PFLU_RS08895	0.64	-0.0
1,971,654	+		PFLU_RS08895	0.64	+0.1
1,971,654	+		PFLU_RS08895	0.64	+0.1
1,971,654	+		PFLU_RS08895	0.64	-0.4
1,971,654	+		PFLU_RS08895	0.64	-0.9
1,971,654	+		PFLU_RS08895	0.64	-2.4
1,971,654	+		PFLU_RS08895	0.64	-0.1
1,971,654	+		PFLU_RS08895	0.64	+1.2
1,971,654	+		PFLU_RS08895	0.64	+0.3
1,971,654	+		PFLU_RS08895	0.64	+0.1
1,971,654	+		PFLU_RS08895	0.64	-0.2
1,971,654	+		PFLU_RS08895	0.64	+0.5
1,971,654	+		PFLU_RS08895	0.64	+0.1
1,971,655	-		PFLU_RS08895	0.64	-0.9
1,971,655	-		PFLU_RS08895	0.64	-1.0
1,971,655	-		PFLU_RS08895	0.64	-0.5
1,971,655	-		PFLU_RS08895	0.64	-0.7
1,971,655	-		PFLU_RS08895	0.64	+0.1
1,971,655	-		PFLU_RS08895	0.64	-1.2
1,971,655	-		PFLU_RS08895	0.64	-1.1
1,971,655	-		PFLU_RS08895	0.64	-0.6
1,971,655	-		PFLU_RS08895	0.64	+0.3
1,971,655	-		PFLU_RS08895	0.64	+0.0
1,971,655	-		PFLU_RS08895	0.64	-0.0
1,971,655	-		PFLU_RS08895	0.64	+0.0
1,971,655	-		PFLU_RS08895	0.64	+0.7
1,971,655	-		PFLU_RS08895	0.64	+0.5
1,971,655	-		PFLU_RS08895	0.64	+0.2
1,971,655	-		PFLU_RS08895	0.64	+0.4
1,971,655	-		PFLU_RS08895	0.64	+0.3
1,971,655	-		PFLU_RS08895	0.64	+0.1
1,971,655	-		PFLU_RS08895	0.64	+0.3
1,971,655	-		PFLU_RS08895	0.64	-1.3
1,971,655	-		PFLU_RS08895	0.64	+0.1
1,971,655	-		PFLU_RS08895	0.64	-0.8
1,971,702	+		PFLU_RS08895	0.70	+0.5
1,971,702	+		PFLU_RS08895	0.70	-0.2
1,971,714	+		PFLU_RS08895	0.72	+1.1
1,971,714	+		PFLU_RS08895	0.72	-0.1
1,971,714	+		PFLU_RS08895	0.72	-0.3
1,971,715	-		PFLU_RS08895	0.72	+0.3
1,971,747	+		PFLU_RS08895	0.76	-0.1
1,971,747	+		PFLU_RS08895	0.76	-1.8
1,971,747	+		PFLU_RS08895	0.76	-0.5
1,971,747	+		PFLU_RS08895	0.76	-1.0
1,971,747	+		PFLU_RS08895	0.76	+0.5
1,971,748	-		PFLU_RS08895	0.76	+0.3
1,971,748	-		PFLU_RS08895	0.76	-1.6
1,971,748	-		PFLU_RS08895	0.76	+0.4
1,971,817	+		PFLU_RS08895	0.85	-0.4
1,971,817	+		PFLU_RS08895	0.85	-0.8
1,971,817	+		PFLU_RS08895	0.85	-0.4
1,971,818	-		PFLU_RS08895	0.85	+0.1