Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07845

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,746,231	+				+0.4
1,746,232	-				+0.3
1,746,252	-				+0.2
1,746,329	+				+0.2
1,746,370	+				-0.2
1,746,582	+		PFLU_RS07840	0.25	+0.3
1,746,582	+		PFLU_RS07840	0.25	-0.5
1,746,582	+		PFLU_RS07840	0.25	-0.9
1,746,582	+		PFLU_RS07840	0.25	-0.3
1,746,582	+		PFLU_RS07840	0.25	+0.6
1,746,582	+		PFLU_RS07840	0.25	+0.4
1,746,582	+		PFLU_RS07840	0.25	-0.3
1,746,582	+		PFLU_RS07840	0.25	-0.8
1,746,582	+		PFLU_RS07840	0.25	-0.9
1,746,582	+		PFLU_RS07840	0.25	+1.1
1,746,582	+		PFLU_RS07840	0.25	+0.7
1,746,582	+		PFLU_RS07840	0.25	-0.2
1,746,582	+		PFLU_RS07840	0.25	+1.3
1,746,582	+		PFLU_RS07840	0.25	-0.3
1,746,583	-		PFLU_RS07840	0.25	-0.3
1,746,583	-		PFLU_RS07840	0.25	+0.6
1,746,583	-		PFLU_RS07840	0.25	-0.4
1,746,583	-		PFLU_RS07840	0.25	+0.1
1,746,583	-		PFLU_RS07840	0.25	+0.3
1,746,583	-		PFLU_RS07840	0.25	+0.1
1,746,583	-		PFLU_RS07840	0.25	-0.2
1,746,583	-		PFLU_RS07840	0.25	-0.3
1,746,583	-		PFLU_RS07840	0.25	+0.2
1,746,583	-		PFLU_RS07840	0.25	-0.2
1,746,583	-		PFLU_RS07840	0.25	+0.2
1,746,583	-		PFLU_RS07840	0.25	-0.3
1,746,583	-		PFLU_RS07840	0.25	-0.2
1,746,583	-		PFLU_RS07840	0.25	-0.2
1,746,583	-		PFLU_RS07840	0.25	-1.2
1,746,586	+		PFLU_RS07840	0.26	-0.6
1,746,586	+		PFLU_RS07840	0.26	-0.5
1,746,586	+		PFLU_RS07840	0.26	+0.8
1,746,587	-		PFLU_RS07840	0.26	+0.6
1,746,587	-		PFLU_RS07840	0.26	+0.7
1,746,640	-		PFLU_RS07840	0.33	+0.2
1,746,688	+		PFLU_RS07840	0.41	-0.2
1,746,688	+		PFLU_RS07840	0.41	+0.5
1,746,689	-		PFLU_RS07840	0.41	+1.0
1,746,689	-		PFLU_RS07840	0.41	+0.2
1,746,689	-		PFLU_RS07840	0.41	+0.1
1,746,743	+		PFLU_RS07840	0.49	-0.7
1,746,743	+		PFLU_RS07840	0.49	+0.5
1,746,743	+		PFLU_RS07840	0.49	-0.2
1,746,743	+		PFLU_RS07840	0.49	+0.8
1,746,743	+		PFLU_RS07840	0.49	-0.1
1,746,744	-		PFLU_RS07840	0.49	+0.2
1,746,744	-		PFLU_RS07840	0.49	-0.2
1,746,744	-		PFLU_RS07840	0.49	-0.7
1,746,796	-		PFLU_RS07840	0.56	+1.1
1,746,796	-		PFLU_RS07840	0.56	+0.3
1,746,828	+		PFLU_RS07840	0.61	+0.2
1,746,931	+		PFLU_RS07840	0.76	-0.4
1,746,931	+		PFLU_RS07840	0.76	-0.2
1,746,932	-		PFLU_RS07840	0.76	-1.2
1,746,932	-		PFLU_RS07840	0.76	-0.1
1,746,932	-		PFLU_RS07840	0.76	-0.1
1,746,952	+		PFLU_RS07840	0.79	+0.0
1,746,952	+		PFLU_RS07840	0.79	-0.1
1,746,952	+		PFLU_RS07840	0.79	+2.3
1,746,952	+		PFLU_RS07840	0.79	-0.8
1,746,952	+		PFLU_RS07840	0.79	-0.8
1,746,952	+		PFLU_RS07840	0.79	-0.9
1,746,952	+		PFLU_RS07840	0.79	-1.1
1,746,952	+		PFLU_RS07840	0.79	+0.1
1,746,952	+		PFLU_RS07840	0.79	+0.3
1,746,952	+		PFLU_RS07840	0.79	+0.4
1,746,952	+		PFLU_RS07840	0.79	-0.9
1,746,952	+		PFLU_RS07840	0.79	+0.6
1,746,952	+		PFLU_RS07840	0.79	-0.8
1,746,953	-		PFLU_RS07840	0.79	-0.4
1,746,953	-		PFLU_RS07840	0.79	-0.6
1,746,953	-		PFLU_RS07840	0.79	+0.8
1,746,953	-		PFLU_RS07840	0.79	-0.4
1,746,953	-		PFLU_RS07840	0.79	+0.6
1,746,953	-		PFLU_RS07840	0.79	-0.1
1,746,953	-		PFLU_RS07840	0.79	+0.4
1,746,953	-		PFLU_RS07840	0.79	-0.1
1,746,953	-		PFLU_RS07840	0.79	-0.2
1,746,953	-		PFLU_RS07840	0.79	+0.8
1,746,953	-		PFLU_RS07840	0.79	+0.4
1,746,953	-		PFLU_RS07840	0.79	+0.2
1,746,953	-		PFLU_RS07840	0.79	+1.0
1,746,953	-		PFLU_RS07840	0.79	+1.2
1,746,953	-		PFLU_RS07840	0.79	-0.0
1,746,953	-		PFLU_RS07840	0.79	+0.3
1,746,955	+		PFLU_RS07840	0.80	-1.2
1,746,955	+		PFLU_RS07840	0.80	+1.1
1,746,986	+		PFLU_RS07840	0.84	+1.1
1,747,118	+				-0.5
1,747,118	+				+0.1
1,747,118	+				+0.9
1,747,119	-				-0.2
1,747,119	-				-1.1
1,747,119	-				+0.5
1,747,119	-				+0.3
1,747,224	+		PFLU_RS07845	0.32	+0.2
1,747,224	+		PFLU_RS07845	0.32	-0.5
1,747,224	+		PFLU_RS07845	0.32	-0.1
1,747,262	+		PFLU_RS07845	0.43	-0.6
1,747,263	-		PFLU_RS07845	0.43	-0.3
1,747,315	-		PFLU_RS07845	0.58	+0.2
1,747,343	-		PFLU_RS07845	0.67	-0.4
1,747,343	-		PFLU_RS07845	0.67	-0.5
1,747,343	-		PFLU_RS07845	0.67	+0.0
1,747,397	+		PFLU_RS07845	0.83	+0.0
1,747,397	+		PFLU_RS07845	0.83	-0.4
1,747,397	+		PFLU_RS07845	0.83	-0.5
1,747,397	+		PFLU_RS07845	0.83	-0.2
1,747,397	+		PFLU_RS07845	0.83	+1.2
1,747,397	+		PFLU_RS07845	0.83	+0.4
1,747,398	-		PFLU_RS07845	0.83	+0.5
1,747,398	-		PFLU_RS07845	0.83	-0.4
1,747,398	-		PFLU_RS07845	0.83	+0.1
1,747,398	-		PFLU_RS07845	0.83	-0.2
1,747,398	-		PFLU_RS07845	0.83	+0.9
1,747,398	-		PFLU_RS07845	0.83	-0.3
1,747,398	-		PFLU_RS07845	0.83	+0.1
1,747,398	-		PFLU_RS07845	0.83	-0.3
1,747,398	-		PFLU_RS07845	0.83	-0.6
1,747,398	-		PFLU_RS07845	0.83	-0.3
1,747,460	-				-0.6
1,747,478	-				-2.1
1,747,569	+				-0.0
1,747,569	+				-0.1
1,747,569	+				-0.2
1,747,569	+				-0.0
1,747,570	-				+0.3
1,747,624	-				+0.1
1,747,624	-				-0.1
1,747,849	-				-0.3
1,747,849	-				-0.5
1,747,895	+				-1.0
1,747,895	+				+0.3
1,747,896	-				-0.5
1,747,896	-				+0.2
1,747,896	-				-0.2
1,747,978	+				-1.2
1,747,978	+				-0.4
1,747,978	+				+0.5
1,747,978	+				-0.0
1,747,978	+				+0.5
1,747,978	+				+0.1
1,747,978	+				-0.2
1,747,978	+				-0.0
1,747,978	+				-0.6
1,747,979	-				+0.8
1,747,979	-				+0.4
1,747,979	-				-0.8
1,747,979	-				-0.6
1,747,979	-				+0.6
1,747,979	-				+0.3
1,747,979	-				-0.2
1,747,979	-				+0.1
1,747,979	-				+1.0
1,747,979	-				+0.7
1,747,979	-				+0.8
1,747,979	-				+0.6
1,747,979	-				+1.0
1,747,979	-				+1.4
1,748,005	+				-0.3
1,748,006	-				-0.5
1,748,006	-				-0.7
1,748,101	+				-0.5
1,748,101	+				-0.0
1,748,116	+				-0.0
1,748,172	+				-0.3
1,748,172	+				+0.5
1,748,173	-				+0.6
1,748,173	-				-0.1
1,748,181	+				+0.6
1,748,181	+				+0.8
1,748,181	+				+0.4
1,748,181	+				+0.3
1,748,182	-				+0.4
1,748,182	-				+0.3
1,748,188	+				+0.2
1,748,206	-				-0.3
1,748,244	+				-0.5
1,748,289	+				-0.5
1,748,289	+				-0.3
1,748,332	+				+0.1
1,748,356	+				+1.0
1,748,356	+				+0.8
1,748,357	-				-1.4
1,748,357	-				+0.7
1,748,374	-				-0.1
1,748,374	-				-0.5
1,748,374	-				+1.5
1,748,386	+				-0.6
1,748,386	+				+0.1
1,748,386	+				+1.0
1,748,386	+				+0.0
1,748,387	-				+1.1
1,748,387	-				-0.4
1,748,414	+				+0.2
1,748,415	-				-0.0
1,748,415	-				+0.3
1,748,415	-				-0.3
1,748,422	+				+1.2
1,748,422	+				-0.7
1,748,423	-				+0.7
1,748,426	+				+0.5
1,748,426	+				-0.2
1,748,427	-				+0.3
1,748,430	+				+1.0
1,748,430	+				+0.5
1,748,430	+				+1.2
1,748,430	+				-0.5
1,748,430	+				+0.2
1,748,431	-				+0.0
1,748,431	-				-0.7
1,748,431	-				-0.3
1,748,431	-				+0.2
1,748,437	-				+0.3