Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28965

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,437,847	+				-0.1
6,437,864	-				-0.5
6,437,877	+				+0.4
6,437,878	-				+0.7
6,437,915	+				+0.1
6,437,915	+				-0.7
6,437,915	+				+0.2
6,437,915	+				-0.6
6,437,916	-				-0.2
6,437,920	+				+0.6
6,437,920	+				+0.8
6,437,920	+				-0.1
6,437,920	+				-0.6
6,437,921	-				-0.6
6,437,935	+				+0.1
6,437,935	+				+0.6
6,437,935	+				-1.9
6,437,936	-				+0.0
6,437,936	-				+2.1
6,437,936	-				-0.2
6,437,936	-				-1.4
6,437,944	+				-0.5
6,437,944	+				+0.0
6,437,944	+				+0.1
6,437,944	+				+0.6
6,437,945	-				-0.4
6,437,965	+				-0.2
6,437,965	+				-0.6
6,437,966	-				-0.4
6,437,966	-				-0.4
6,438,054	+		PFLU_RS28955	0.22	+0.3
6,438,054	+		PFLU_RS28955	0.22	-0.1
6,438,054	+		PFLU_RS28955	0.22	-0.1
6,438,054	+		PFLU_RS28955	0.22	+0.4
6,438,055	-		PFLU_RS28955	0.22	-0.1
6,438,055	-		PFLU_RS28955	0.22	+0.5
6,438,055	-		PFLU_RS28955	0.22	-1.0
6,438,055	-		PFLU_RS28955	0.22	+1.0
6,438,055	-		PFLU_RS28955	0.22	-0.1
6,438,055	-		PFLU_RS28955	0.22	+0.3
6,438,058	+		PFLU_RS28955	0.24	+0.4
6,438,058	+		PFLU_RS28955	0.24	-0.3
6,438,059	-		PFLU_RS28955	0.24	-0.6
6,438,059	-		PFLU_RS28955	0.24	-0.4
6,438,059	-		PFLU_RS28955	0.24	+0.9
6,438,059	-		PFLU_RS28955	0.24	+0.7
6,438,076	+		PFLU_RS28955	0.32	+0.8
6,438,076	+		PFLU_RS28955	0.32	+0.5
6,438,076	+		PFLU_RS28955	0.32	+0.7
6,438,076	+		PFLU_RS28955	0.32	+0.4
6,438,076	+		PFLU_RS28955	0.32	+0.6
6,438,076	+		PFLU_RS28955	0.32	-0.7
6,438,076	+		PFLU_RS28955	0.32	-1.4
6,438,076	+		PFLU_RS28955	0.32	+0.7
6,438,077	-		PFLU_RS28955	0.33	+0.3
6,438,077	-		PFLU_RS28955	0.33	+0.4
6,438,077	-		PFLU_RS28955	0.33	-0.5
6,438,077	-		PFLU_RS28955	0.33	+0.2
6,438,077	-		PFLU_RS28955	0.33	+0.7
6,438,077	-		PFLU_RS28955	0.33	-0.1
6,438,077	-		PFLU_RS28955	0.33	+0.8
6,438,077	-		PFLU_RS28955	0.33	+0.2
6,438,077	-		PFLU_RS28955	0.33	+0.6
6,438,096	+		PFLU_RS28955	0.42	-0.7
6,438,096	+		PFLU_RS28955	0.42	+0.4
6,438,097	-		PFLU_RS28955	0.42	-0.3
6,438,097	-		PFLU_RS28955	0.42	+0.8
6,438,097	-		PFLU_RS28955	0.42	+0.6
6,438,097	-		PFLU_RS28955	0.42	+1.0
6,438,097	-		PFLU_RS28955	0.42	+1.0
6,438,097	-		PFLU_RS28955	0.42	+0.4
6,438,097	-		PFLU_RS28955	0.42	+0.7
6,438,097	-		PFLU_RS28955	0.42	+0.4
6,438,097	-		PFLU_RS28955	0.42	+1.0
6,438,097	-		PFLU_RS28955	0.42	+0.5
6,438,097	-		PFLU_RS28955	0.42	+0.8
6,438,097	-		PFLU_RS28955	0.42	+0.1
6,438,097	-		PFLU_RS28955	0.42	+1.1
6,438,099	+		PFLU_RS28955	0.43	-1.1
6,438,099	+		PFLU_RS28955	0.43	-0.6
6,438,099	+		PFLU_RS28955	0.43	+0.4
6,438,099	+		PFLU_RS28955	0.43	+1.2
6,438,099	+		PFLU_RS28955	0.43	+0.7
6,438,099	+		PFLU_RS28955	0.43	-0.2
6,438,099	+		PFLU_RS28955	0.43	+0.1
6,438,099	+		PFLU_RS28955	0.43	-0.0
6,438,100	-		PFLU_RS28955	0.44	+1.2
6,438,100	-		PFLU_RS28955	0.44	-0.3
6,438,100	-		PFLU_RS28955	0.44	+1.1
6,438,100	-		PFLU_RS28955	0.44	-0.2
6,438,100	-		PFLU_RS28955	0.44	+0.9
6,438,100	-		PFLU_RS28955	0.44	+1.2
6,438,100	-		PFLU_RS28955	0.44	+0.3
6,438,166	+		PFLU_RS28955	0.75	+0.2
6,438,166	+		PFLU_RS28955	0.75	-0.1
6,438,167	-		PFLU_RS28955	0.76	+0.8
6,438,167	-		PFLU_RS28955	0.76	-1.2
6,438,167	-		PFLU_RS28955	0.76	-1.0
6,438,229	-				+0.3
6,438,259	+		PFLU_RS28960	0.14	+0.8
6,438,313	+		PFLU_RS28960	0.31	-0.2
6,438,417	+		PFLU_RS28960	0.64	+0.1
6,438,417	+		PFLU_RS28960	0.64	+0.9
6,438,417	+		PFLU_RS28960	0.64	+0.4
6,438,418	-		PFLU_RS28960	0.64	+0.7
6,438,551	+				-0.2
6,438,552	-				-0.1
6,438,552	-				+0.6
6,438,552	-				+0.7
6,438,552	-				+0.4
6,438,553	+				-0.0
6,438,553	+				+0.2
6,438,553	+				+0.6
6,438,553	+				-0.5
6,438,553	+				+0.5
6,438,553	+				+0.3
6,438,553	+				-0.2
6,438,553	+				-0.6
6,438,553	+				-0.6
6,438,553	+				+1.9
6,438,553	+				-0.1
6,438,553	+				-1.0
6,438,554	-				-1.1
6,438,554	-				-1.8
6,438,554	-				-2.2
6,438,554	-				-0.9
6,438,554	-				+0.0
6,438,554	-				-1.5
6,438,554	-				-0.2
6,438,554	-				-1.4
6,438,554	-				-0.2
6,438,554	-				-0.8
6,438,554	-				-0.4
6,438,554	-				-1.2
6,438,612	+				-0.6
6,438,673	+				-2.1
6,438,673	+				-0.2
6,438,674	-				-2.2
6,438,674	-				-1.1
6,438,674	-				-1.5
6,438,674	-				-0.5
6,438,711	+				-1.0
6,438,712	-				+1.0
6,438,783	+				+0.6
6,438,784	-				-0.2
6,438,784	-				-0.3
6,438,946	+		PFLU_RS28965	0.24	-2.8
6,438,946	+		PFLU_RS28965	0.24	-1.2
6,438,946	+		PFLU_RS28965	0.24	-3.5
6,438,946	+		PFLU_RS28965	0.24	-1.8
6,438,946	+		PFLU_RS28965	0.24	-3.0
6,438,946	+		PFLU_RS28965	0.24	-1.6
6,438,946	+		PFLU_RS28965	0.24	-2.0
6,438,946	+		PFLU_RS28965	0.24	-2.7
6,438,946	+		PFLU_RS28965	0.24	-3.8
6,438,946	+		PFLU_RS28965	0.24	-1.7
6,438,947	+		PFLU_RS28965	0.24	-2.2
6,438,947	-		PFLU_RS28965	0.24	-2.1
6,438,947	-		PFLU_RS28965	0.24	-1.8
6,438,947	-		PFLU_RS28965	0.24	-2.8
6,438,947	-		PFLU_RS28965	0.24	-2.0
6,438,947	-		PFLU_RS28965	0.24	-2.4
6,438,947	-		PFLU_RS28965	0.24	-2.7
6,438,947	-		PFLU_RS28965	0.24	-2.5
6,438,947	-		PFLU_RS28965	0.24	-1.8
6,438,947	-		PFLU_RS28965	0.24	-2.5
6,438,956	+		PFLU_RS28965	0.25	-1.2
6,438,957	-		PFLU_RS28965	0.25	-2.2
6,438,957	-		PFLU_RS28965	0.25	-1.1
6,438,957	-		PFLU_RS28965	0.25	-1.8
6,438,957	-		PFLU_RS28965	0.25	-3.1
6,438,960	+		PFLU_RS28965	0.26	-3.7
6,439,028	+		PFLU_RS28965	0.37	-2.5
6,439,028	+		PFLU_RS28965	0.37	-2.7
6,439,028	+		PFLU_RS28965	0.37	-3.0
6,439,028	+		PFLU_RS28965	0.37	-2.9
6,439,028	+		PFLU_RS28965	0.37	-2.7
6,439,028	+		PFLU_RS28965	0.37	-3.4
6,439,028	+		PFLU_RS28965	0.37	-3.2
6,439,028	+		PFLU_RS28965	0.37	-2.0
6,439,028	+		PFLU_RS28965	0.37	-0.6
6,439,028	+		PFLU_RS28965	0.37	-2.4
6,439,028	+		PFLU_RS28965	0.37	-2.7
6,439,029	-		PFLU_RS28965	0.37	-2.6
6,439,029	-		PFLU_RS28965	0.37	-2.9
6,439,029	-		PFLU_RS28965	0.37	-1.7
6,439,029	-		PFLU_RS28965	0.37	-0.5
6,439,029	-		PFLU_RS28965	0.37	-2.0
6,439,029	-		PFLU_RS28965	0.37	-1.9
6,439,029	-		PFLU_RS28965	0.37	-1.7
6,439,081	-		PFLU_RS28965	0.45	-3.7
6,439,138	+		PFLU_RS28965	0.54	-2.3
6,439,139	-		PFLU_RS28965	0.54	-3.0
6,439,139	-		PFLU_RS28965	0.54	-4.1
6,439,238	+		PFLU_RS28965	0.70	-2.7
6,439,238	+		PFLU_RS28965	0.70	-2.7
6,439,238	+		PFLU_RS28965	0.70	-3.5
6,439,238	+		PFLU_RS28965	0.70	-1.9
6,439,256	+		PFLU_RS28965	0.73	-1.7
6,439,256	+		PFLU_RS28965	0.73	-4.3
6,439,257	-		PFLU_RS28965	0.73	-2.0
6,439,257	-		PFLU_RS28965	0.73	-0.3
6,439,388	+				-2.0
6,439,388	+				-1.0
6,439,388	+				-1.4
6,439,388	+				-1.6
6,439,388	+				-1.3
6,439,388	+				-1.7
6,439,388	+				-1.0
6,439,388	+				-2.7
6,439,388	+				-0.7
6,439,388	+				-1.4
6,439,388	+				-1.0
6,439,388	+				-0.7
6,439,388	+				-2.2
6,439,388	+				-1.8
6,439,388	+				-0.4
6,439,388	+				-2.7
6,439,388	+				-3.2
6,439,388	+				-2.2
6,439,388	+				-2.0
6,439,388	+				-1.7
6,439,389	-				-2.4
6,439,389	-				-0.1
6,439,389	-				-1.9
6,439,389	-				-2.2
6,439,389	-				-0.1
6,439,389	-				-0.8
6,439,389	-				-1.9
6,439,389	-				-0.9
6,439,389	-				-2.8
6,439,389	-				-3.7
6,439,389	-				-0.5
6,439,389	-				-1.0
6,439,389	-				-2.7
6,439,389	-				-1.5
6,439,389	-				-0.8
6,439,389	-				-3.1
6,439,390	+				-0.0
6,439,390	+				+0.4
6,439,391	-				-0.3
6,439,391	-				-0.8
6,439,391	-				+1.0
6,439,557	+				-0.5
6,439,560	+				-0.3
6,439,560	+				-0.2
6,439,560	+				+0.2
6,439,561	-				+0.3
6,439,561	-				+0.6
6,439,561	-				-1.4
6,439,561	-				-0.2
6,439,561	-				+0.7
6,439,571	+				-0.2
6,439,572	-				+0.1
6,439,572	-				-0.3
6,439,606	+				+0.2
6,439,606	+				-0.1
6,439,606	+				+0.7
6,439,606	+				-0.8
6,439,607	-				+0.6
6,439,607	-				+0.1
6,439,607	-				+0.9
6,439,607	-				-1.9
6,439,633	-				+0.8
6,439,633	-				-0.5
6,439,657	+				+1.1
6,439,658	-				-0.1
6,439,781	+				+0.0
6,439,782	-				-1.6
6,439,864	+		PFLU_RS28970	0.20	-0.2
6,439,864	+		PFLU_RS28970	0.20	-0.4
6,439,864	+		PFLU_RS28970	0.20	+0.9
6,439,864	+		PFLU_RS28970	0.20	-0.0
6,439,865	-		PFLU_RS28970	0.20	+0.7
6,439,865	-		PFLU_RS28970	0.20	+0.1
6,439,865	-		PFLU_RS28970	0.20	-0.3
6,439,865	-		PFLU_RS28970	0.20	-0.7
6,439,865	-		PFLU_RS28970	0.20	-0.4
6,439,865	-		PFLU_RS28970	0.20	+1.2
6,439,865	-		PFLU_RS28970	0.20	-0.1
6,439,868	+		PFLU_RS28970	0.21	+1.7
6,439,868	+		PFLU_RS28970	0.21	-0.6
6,439,868	+		PFLU_RS28970	0.21	-0.3
6,439,868	+		PFLU_RS28970	0.21	+0.7
6,439,869	-		PFLU_RS28970	0.21	-0.3
6,439,869	-		PFLU_RS28970	0.21	+0.6
6,439,869	-		PFLU_RS28970	0.21	-0.3
6,439,922	+		PFLU_RS28970	0.33	+1.0
6,439,922	+		PFLU_RS28970	0.33	+1.1
6,439,923	-		PFLU_RS28970	0.33	+0.2
6,439,923	-		PFLU_RS28970	0.33	+0.7
6,439,982	+		PFLU_RS28970	0.46	+0.8
6,439,982	+		PFLU_RS28970	0.46	+0.3
6,439,993	+		PFLU_RS28970	0.48	+0.5
6,439,994	-		PFLU_RS28970	0.49	-0.0
6,439,994	-		PFLU_RS28970	0.49	-0.5
6,439,994	-		PFLU_RS28970	0.49	+1.2
6,440,018	+		PFLU_RS28970	0.54	+0.3
6,440,018	+		PFLU_RS28970	0.54	-0.3
6,440,018	+		PFLU_RS28970	0.54	-0.6
6,440,019	-		PFLU_RS28970	0.54	-0.6
6,440,208	+				-0.4
6,440,209	-				-0.5
6,440,209	-				-0.4
6,440,266	+				-0.0
6,440,266	+				+0.1
6,440,267	-				+0.1
6,440,267	-				+0.0