Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26065

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
5,822,408	+		PFLU_RS26060	0.37	+1.4
5,822,454	+		PFLU_RS26060	0.40	+0.4
5,822,455	-		PFLU_RS26060	0.40	+0.4
5,822,497	+		PFLU_RS26060	0.43	-0.9
5,822,498	-		PFLU_RS26060	0.43	-0.2
5,822,498	-		PFLU_RS26060	0.43	+1.1
5,822,576	+		PFLU_RS26060	0.48	+0.3
5,822,576	+		PFLU_RS26060	0.48	+0.0
5,822,576	+		PFLU_RS26060	0.48	+0.2
5,822,577	-		PFLU_RS26060	0.48	-0.2
5,822,630	-		PFLU_RS26060	0.51	+0.4
5,822,670	+		PFLU_RS26060	0.54	+0.8
5,822,671	-		PFLU_RS26060	0.54	-0.2
5,822,671	-		PFLU_RS26060	0.54	-0.0
5,822,736	-		PFLU_RS26060	0.58	+1.1
5,822,747	+		PFLU_RS26060	0.59	+0.2
5,822,747	+		PFLU_RS26060	0.59	+0.8
5,822,747	+		PFLU_RS26060	0.59	+0.5
5,822,747	+		PFLU_RS26060	0.59	+0.6
5,822,747	+		PFLU_RS26060	0.59	+0.0
5,822,747	+		PFLU_RS26060	0.59	-0.2
5,822,747	+		PFLU_RS26060	0.59	+0.4
5,822,747	+		PFLU_RS26060	0.59	-0.5
5,822,747	+		PFLU_RS26060	0.59	+0.7
5,822,748	-		PFLU_RS26060	0.59	+0.7
5,822,748	-		PFLU_RS26060	0.59	-0.1
5,822,748	-		PFLU_RS26060	0.59	+1.1
5,822,748	-		PFLU_RS26060	0.59	-0.4
5,822,748	-		PFLU_RS26060	0.59	+0.7
5,822,748	-		PFLU_RS26060	0.59	-0.3
5,822,748	-		PFLU_RS26060	0.59	+1.0
5,822,748	-		PFLU_RS26060	0.59	+0.1
5,822,748	-		PFLU_RS26060	0.59	-0.9
5,822,748	-		PFLU_RS26060	0.59	+0.3
5,822,748	-		PFLU_RS26060	0.59	+0.8
5,822,748	-		PFLU_RS26060	0.59	+1.7
5,822,751	-		PFLU_RS26060	0.59	+0.5
5,822,751	-		PFLU_RS26060	0.59	-1.4
5,822,751	-		PFLU_RS26060	0.59	+0.1
5,822,751	-		PFLU_RS26060	0.59	-1.0
5,822,788	+		PFLU_RS26060	0.61	+0.1
5,822,789	-		PFLU_RS26060	0.61	-0.7
5,822,831	+		PFLU_RS26060	0.64	-0.2
5,822,831	+		PFLU_RS26060	0.64	+0.2
5,822,832	-		PFLU_RS26060	0.64	+0.5
5,822,833	+		PFLU_RS26060	0.64	-0.3
5,822,834	-		PFLU_RS26060	0.64	+0.5
5,822,848	+		PFLU_RS26060	0.65	-0.3
5,822,849	-		PFLU_RS26060	0.65	+0.5
5,822,902	+		PFLU_RS26060	0.69	-0.1
5,822,902	+		PFLU_RS26060	0.69	-1.0
5,822,902	+		PFLU_RS26060	0.69	+1.4
5,822,904	+		PFLU_RS26060	0.69	-0.2
5,822,904	+		PFLU_RS26060	0.69	+1.2
5,822,904	+		PFLU_RS26060	0.69	+1.1
5,822,904	+		PFLU_RS26060	0.69	+0.1
5,822,904	+		PFLU_RS26060	0.69	+1.6
5,822,904	+		PFLU_RS26060	0.69	-0.3
5,822,904	+		PFLU_RS26060	0.69	+0.9
5,822,904	+		PFLU_RS26060	0.69	-0.6
5,822,904	+		PFLU_RS26060	0.69	+0.5
5,822,904	+		PFLU_RS26060	0.69	+0.9
5,822,904	+		PFLU_RS26060	0.69	+0.4
5,822,904	+		PFLU_RS26060	0.69	+0.1
5,822,904	+		PFLU_RS26060	0.69	-0.7
5,822,904	+		PFLU_RS26060	0.69	+0.6
5,822,904	+		PFLU_RS26060	0.69	+0.4
5,822,904	+		PFLU_RS26060	0.69	+1.4
5,822,904	+		PFLU_RS26060	0.69	+0.2
5,822,904	+		PFLU_RS26060	0.69	-0.8
5,822,904	+		PFLU_RS26060	0.69	-0.4
5,822,904	+		PFLU_RS26060	0.69	-0.3
5,822,905	-		PFLU_RS26060	0.69	-0.3
5,822,905	-		PFLU_RS26060	0.69	-0.4
5,822,905	-		PFLU_RS26060	0.69	+1.3
5,822,905	-		PFLU_RS26060	0.69	+0.1
5,822,905	-		PFLU_RS26060	0.69	-0.6
5,822,905	-		PFLU_RS26060	0.69	+0.2
5,822,905	-		PFLU_RS26060	0.69	-0.0
5,822,905	-		PFLU_RS26060	0.69	-0.6
5,822,905	-		PFLU_RS26060	0.69	+0.7
5,822,905	-		PFLU_RS26060	0.69	+0.3
5,822,905	-		PFLU_RS26060	0.69	+1.0
5,822,905	-		PFLU_RS26060	0.69	-1.2
5,822,905	-		PFLU_RS26060	0.69	+0.0
5,822,905	-		PFLU_RS26060	0.69	+0.4
5,822,905	-		PFLU_RS26060	0.69	-0.9
5,822,905	-		PFLU_RS26060	0.69	-0.4
5,822,905	-		PFLU_RS26060	0.69	+0.1
5,822,905	-		PFLU_RS26060	0.69	-0.8
5,822,905	-		PFLU_RS26060	0.69	+0.6
5,822,931	+		PFLU_RS26060	0.70	+0.3
5,822,932	-		PFLU_RS26060	0.70	+0.5
5,822,935	+		PFLU_RS26060	0.71	+1.8
5,822,936	-		PFLU_RS26060	0.71	+0.5
5,822,936	-		PFLU_RS26060	0.71	+0.3
5,822,945	+		PFLU_RS26060	0.71	-1.0
5,822,945	+		PFLU_RS26060	0.71	-2.5
5,822,945	+		PFLU_RS26060	0.71	+0.3
5,822,945	+		PFLU_RS26060	0.71	-0.1
5,822,945	+		PFLU_RS26060	0.71	+1.0
5,822,945	+		PFLU_RS26060	0.71	+1.7
5,822,946	-		PFLU_RS26060	0.71	+1.7
5,822,946	-		PFLU_RS26060	0.71	-0.3
5,822,946	-		PFLU_RS26060	0.71	+1.0
5,822,946	-		PFLU_RS26060	0.71	+0.2
5,822,946	-		PFLU_RS26060	0.71	-1.2
5,822,950	+		PFLU_RS26060	0.72	-0.0
5,822,950	+		PFLU_RS26060	0.72	+0.3
5,822,950	+		PFLU_RS26060	0.72	+0.8
5,822,951	-		PFLU_RS26060	0.72	+0.7
5,822,951	-		PFLU_RS26060	0.72	-0.9
5,822,951	-		PFLU_RS26060	0.72	-0.1
5,822,952	+		PFLU_RS26060	0.72	+1.0
5,822,952	+		PFLU_RS26060	0.72	+1.0
5,822,953	-		PFLU_RS26060	0.72	-0.7
5,822,953	-		PFLU_RS26060	0.72	+1.0
5,822,974	+		PFLU_RS26060	0.73	-0.3
5,822,974	+		PFLU_RS26060	0.73	+0.4
5,822,974	+		PFLU_RS26060	0.73	+0.5
5,822,974	+		PFLU_RS26060	0.73	-0.9
5,822,975	-		PFLU_RS26060	0.73	-0.7
5,823,032	+		PFLU_RS26060	0.77	-0.2
5,823,033	-		PFLU_RS26060	0.77	+1.6
5,823,039	+		PFLU_RS26060	0.77	+0.3
5,823,040	-		PFLU_RS26060	0.77	+1.3
5,823,092	+		PFLU_RS26060	0.81	-1.3
5,823,092	+		PFLU_RS26060	0.81	-0.2
5,823,093	-		PFLU_RS26060	0.81	+0.4
5,823,093	-		PFLU_RS26060	0.81	-1.0
5,823,170	+		PFLU_RS26060	0.86	-0.2
5,823,170	+		PFLU_RS26060	0.86	+0.9
5,823,171	-		PFLU_RS26060	0.86	-0.2
5,823,198	+		PFLU_RS26060	0.87	+0.3
5,823,198	+		PFLU_RS26060	0.87	+0.1
5,823,199	-		PFLU_RS26060	0.88	+1.2
5,823,248	-				-0.4
5,823,250	+				+0.0
5,823,250	+				-0.5
5,823,250	+				+0.6
5,823,250	+				+0.4
5,823,250	+				+0.2
5,823,250	+				+0.9
5,823,250	+				+0.2
5,823,250	+				+0.5
5,823,251	-				+1.4
5,823,251	-				+0.7
5,823,251	-				-0.0
5,823,285	+				-0.3
5,823,285	+				-0.1
5,823,288	+				+0.0
5,823,288	+				-0.2
5,823,288	+				+0.1
5,823,288	+				+0.5
5,823,288	+				+0.2
5,823,289	-				+0.7
5,823,289	-				-0.4
5,823,289	-				+0.3
5,823,331	+				+0.3
5,823,396	-				+0.2
5,823,396	-				+0.3
5,823,396	-				-0.2
5,823,421	+				+0.5
5,823,421	+				-1.0
5,823,421	+				-0.4
5,823,421	+				-0.1
5,823,421	+				-0.3
5,823,421	+				-0.1
5,823,421	+				+0.6
5,823,421	+				-1.5
5,823,422	-				-1.0
5,823,422	-				+0.0
5,823,422	-				+0.7
5,823,422	-				+0.1
5,823,422	-				+0.1
5,823,422	-				-0.2
5,823,422	-				-0.1
5,823,448	+				-0.6
5,823,448	+				-1.1
5,823,448	+				-0.1
5,823,494	+		PFLU_RS26065	0.11	+0.5
5,823,495	-		PFLU_RS26065	0.11	+0.5
5,823,498	-		PFLU_RS26065	0.12	-0.5
5,823,538	+		PFLU_RS26065	0.16	+0.8
5,823,539	-		PFLU_RS26065	0.16	-1.7
5,823,539	-		PFLU_RS26065	0.16	+0.0
5,823,539	-		PFLU_RS26065	0.16	-0.5
5,823,558	-		PFLU_RS26065	0.18	+0.5
5,823,604	+		PFLU_RS26065	0.23	-1.7
5,823,604	+		PFLU_RS26065	0.23	-0.9
5,823,605	-		PFLU_RS26065	0.23	-0.0
5,823,605	-		PFLU_RS26065	0.23	+0.4
5,823,605	-		PFLU_RS26065	0.23	+0.1
5,823,633	+		PFLU_RS26065	0.27	+0.6
5,823,633	+		PFLU_RS26065	0.27	+0.4
5,823,634	-		PFLU_RS26065	0.27	-0.3
5,823,634	-		PFLU_RS26065	0.27	+1.0
5,823,634	-		PFLU_RS26065	0.27	+0.3
5,823,700	+		PFLU_RS26065	0.34	+0.7
5,823,756	+		PFLU_RS26065	0.40	-0.7
5,823,761	+		PFLU_RS26065	0.41	+0.3
5,823,762	-		PFLU_RS26065	0.41	-0.3
5,823,831	+		PFLU_RS26065	0.48	+0.3
5,823,831	+		PFLU_RS26065	0.48	-0.4
5,823,831	+		PFLU_RS26065	0.48	-0.1
5,823,831	+		PFLU_RS26065	0.48	+0.4
5,823,831	+		PFLU_RS26065	0.48	-0.2
5,823,831	+		PFLU_RS26065	0.48	+0.7
5,823,832	-		PFLU_RS26065	0.48	-0.4
5,823,832	-		PFLU_RS26065	0.48	-0.8
5,823,832	-		PFLU_RS26065	0.48	+0.4
5,823,832	-		PFLU_RS26065	0.48	+0.9
5,823,832	-		PFLU_RS26065	0.48	-1.0
5,823,832	-		PFLU_RS26065	0.48	-0.1
5,823,851	-		PFLU_RS26065	0.50	+0.9
5,823,851	-		PFLU_RS26065	0.50	-0.1
5,823,856	+		PFLU_RS26065	0.51	+0.1
5,823,857	-		PFLU_RS26065	0.51	-0.6
5,823,932	+		PFLU_RS26065	0.59	-0.1
5,823,933	-		PFLU_RS26065	0.59	-0.6
5,823,952	+		PFLU_RS26065	0.61	-1.2
5,823,975	+		PFLU_RS26065	0.64	+0.4
5,823,976	-		PFLU_RS26065	0.64	+0.0
5,824,011	-		PFLU_RS26065	0.68	+0.2
5,824,027	+		PFLU_RS26065	0.70	-0.1
5,824,028	-		PFLU_RS26065	0.70	+0.2
5,824,028	-		PFLU_RS26065	0.70	-0.9
5,824,031	+		PFLU_RS26065	0.70	+0.7
5,824,031	+		PFLU_RS26065	0.70	+0.0
5,824,031	+		PFLU_RS26065	0.70	-0.4
5,824,031	+		PFLU_RS26065	0.70	-0.8
5,824,031	+		PFLU_RS26065	0.70	+1.0
5,824,032	-		PFLU_RS26065	0.70	+0.1
5,824,032	-		PFLU_RS26065	0.70	+0.2
5,824,032	-		PFLU_RS26065	0.70	-0.0
5,824,032	-		PFLU_RS26065	0.70	+0.8
5,824,057	-		PFLU_RS26065	0.73	+0.2
5,824,112	+		PFLU_RS26065	0.79	-1.5
5,824,112	+		PFLU_RS26065	0.79	-0.3
5,824,113	-		PFLU_RS26065	0.79	+0.6
5,824,116	+		PFLU_RS26065	0.79	+0.2
5,824,117	-		PFLU_RS26065	0.79	-0.5
5,824,117	-		PFLU_RS26065	0.79	-1.0
5,824,194	-		PFLU_RS26065	0.88	-0.1
5,824,199	+		PFLU_RS26065	0.88	+0.2
5,824,200	-		PFLU_RS26065	0.89	+0.7
5,824,238	-				+0.2
5,824,240	+				-1.0
5,824,241	-				+0.5
5,824,269	-				-0.3
5,824,269	-				+0.7
5,824,392	+				+0.6
5,824,392	+				+0.3
5,824,394	+				+0.3
5,824,394	+				+2.3
5,824,395	-				+0.4
5,824,395	-				-1.4
5,824,415	+		PFLU_RS26070	0.12	-0.9
5,824,415	+		PFLU_RS26070	0.12	-0.5
5,824,415	+		PFLU_RS26070	0.12	-0.1
5,824,416	-		PFLU_RS26070	0.12	+0.1
5,824,416	-		PFLU_RS26070	0.12	+0.9
5,824,416	-		PFLU_RS26070	0.12	+1.3
5,824,416	-		PFLU_RS26070	0.12	+1.1
5,824,420	-		PFLU_RS26070	0.13	+0.7
5,824,514	+		PFLU_RS26070	0.23	-0.2
5,824,514	+		PFLU_RS26070	0.23	-0.2
5,824,514	+		PFLU_RS26070	0.23	-0.5
5,824,515	-		PFLU_RS26070	0.23	+0.7
5,824,515	-		PFLU_RS26070	0.23	-2.3
5,824,526	+		PFLU_RS26070	0.24	+0.4
5,824,527	-		PFLU_RS26070	0.24	-0.3
5,824,527	-		PFLU_RS26070	0.24	+0.7
5,824,542	+		PFLU_RS26070	0.26	+0.2
5,824,543	-		PFLU_RS26070	0.26	-1.3
5,824,543	-		PFLU_RS26070	0.26	+0.0
5,824,543	-		PFLU_RS26070	0.26	+0.0
5,824,543	-		PFLU_RS26070	0.26	+1.8
5,824,574	+		PFLU_RS26070	0.30	-0.2
5,824,575	-		PFLU_RS26070	0.30	+0.4
5,824,603	+		PFLU_RS26070	0.33	+0.0
5,824,603	+		PFLU_RS26070	0.33	-0.1
5,824,603	+		PFLU_RS26070	0.33	+1.6
5,824,603	+		PFLU_RS26070	0.33	+0.7
5,824,604	-		PFLU_RS26070	0.33	-0.3
5,824,604	-		PFLU_RS26070	0.33	+0.8
5,824,604	-		PFLU_RS26070	0.33	+0.4
5,824,605	+		PFLU_RS26070	0.33	+1.3
5,824,668	+		PFLU_RS26070	0.40	-0.3
5,824,691	+		PFLU_RS26070	0.42	-0.5
5,824,691	+		PFLU_RS26070	0.42	-1.4
5,824,691	+		PFLU_RS26070	0.42	+0.6
5,824,691	+		PFLU_RS26070	0.42	-0.0
5,824,691	+		PFLU_RS26070	0.42	-0.0
5,824,707	+		PFLU_RS26070	0.44	+0.6
5,824,767	-		PFLU_RS26070	0.51	+0.7
5,824,769	+		PFLU_RS26070	0.51	+0.6
5,824,769	+		PFLU_RS26070	0.51	-0.2
5,824,770	-		PFLU_RS26070	0.51	-1.4
5,824,779	+		PFLU_RS26070	0.52	-0.2
5,824,780	-		PFLU_RS26070	0.52	+0.6
5,824,891	+		PFLU_RS26070	0.65	+0.0
5,824,904	+		PFLU_RS26070	0.66	+0.8
5,824,905	-		PFLU_RS26070	0.66	-0.2
5,825,020	+		PFLU_RS26070	0.79	+0.6
5,825,020	+		PFLU_RS26070	0.79	+0.2
5,825,021	-		PFLU_RS26070	0.79	-0.0
5,825,064	-		PFLU_RS26070	0.84	-0.2
5,825,080	+		PFLU_RS26070	0.85	-0.0
5,825,080	+		PFLU_RS26070	0.85	-0.7
5,825,120	-		PFLU_RS26070	0.90	+0.3
5,825,123	+				-0.3
5,825,123	+				+0.1
5,825,124	-				+1.2
5,825,124	-				+0.5
5,825,124	-				+0.8
5,825,156	+				-0.1
5,825,156	+				-0.7
5,825,157	-				-0.7
5,825,178	+				-1.6
5,825,179	-				+0.9
5,825,179	-				-0.0
5,825,233	+				-1.0
5,825,234	-				+1.2
5,825,234	-				+0.6
5,825,267	+				-0.9
5,825,267	+				+0.2
5,825,268	-				+0.2