Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS25330

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
5,656,777	+		PFLU_RS25315	0.33	-2.3
5,656,777	+		PFLU_RS25315	0.33	-2.1
5,656,777	+		PFLU_RS25315	0.33	-0.2
5,656,777	+		PFLU_RS25315	0.33	-2.2
5,656,777	+		PFLU_RS25315	0.33	-1.9
5,656,778	-		PFLU_RS25315	0.34	-1.4
5,656,778	-		PFLU_RS25315	0.34	-1.5
5,656,778	-		PFLU_RS25315	0.34	-2.0
5,656,778	-		PFLU_RS25315	0.34	-1.0
5,656,778	-		PFLU_RS25315	0.34	-2.5
5,656,778	-		PFLU_RS25315	0.34	-3.1
5,656,828	+		PFLU_RS25315	0.47	-2.8
5,656,828	+		PFLU_RS25315	0.47	-2.1
5,656,829	-		PFLU_RS25315	0.47	-3.4
5,656,829	-		PFLU_RS25315	0.47	-0.3
5,656,829	-		PFLU_RS25315	0.47	-0.8
5,656,842	+		PFLU_RS25315	0.51	-3.6
5,656,842	+		PFLU_RS25315	0.51	-1.2
5,656,942	+		PFLU_RS25315	0.77	-2.4
5,656,942	+		PFLU_RS25315	0.77	-1.9
5,656,942	+		PFLU_RS25315	0.77	-1.4
5,656,942	+		PFLU_RS25315	0.77	-0.8
5,656,943	-		PFLU_RS25315	0.77	-0.2
5,656,943	-		PFLU_RS25315	0.77	-1.8
5,657,183	+		PFLU_RS25320	0.46	+0.4
5,657,183	+		PFLU_RS25320	0.46	+0.3
5,657,183	+		PFLU_RS25320	0.46	-0.7
5,657,183	+		PFLU_RS25320	0.46	-0.1
5,657,183	+		PFLU_RS25320	0.46	+0.7
5,657,184	-		PFLU_RS25320	0.47	-0.5
5,657,184	-		PFLU_RS25320	0.47	-0.9
5,657,184	-		PFLU_RS25320	0.47	-2.1
5,657,184	-		PFLU_RS25320	0.47	+0.2
5,657,184	-		PFLU_RS25320	0.47	-0.4
5,657,184	-		PFLU_RS25320	0.47	+1.0
5,657,184	-		PFLU_RS25320	0.47	-1.5
5,657,184	-		PFLU_RS25320	0.47	-0.9
5,657,246	+				+0.1
5,657,246	+				+0.7
5,657,246	+				+0.3
5,657,279	+				-0.4
5,657,393	+		PFLU_RS25325	0.37	-0.4
5,657,418	+		PFLU_RS25325	0.43	+0.2
5,657,418	+		PFLU_RS25325	0.43	-0.6
5,657,419	-		PFLU_RS25325	0.43	-0.6
5,657,419	-		PFLU_RS25325	0.43	-0.8
5,657,424	+		PFLU_RS25325	0.44	-0.3
5,657,424	+		PFLU_RS25325	0.44	+1.4
5,657,442	-		PFLU_RS25325	0.48	-0.4
5,657,456	-		PFLU_RS25325	0.51	+0.9
5,657,560	-		PFLU_RS25325	0.74	-1.0
5,657,560	-		PFLU_RS25325	0.74	+0.1
5,657,604	-		PFLU_RS25325	0.84	-0.1
5,657,638	+				-0.1
5,657,638	+				+1.1
5,657,638	+				-0.2
5,657,638	+				+0.4
5,657,639	-				-0.3
5,657,639	-				+0.0
5,657,639	-				-0.3
5,657,639	-				+0.5
5,657,680	+				+0.3
5,657,681	-				+0.2
5,657,681	-				+0.6
5,657,752	+				+0.7
5,657,752	+				+1.1
5,657,752	+				+0.6
5,657,752	+				+1.2
5,657,752	+				+0.5
5,657,753	-				+0.5
5,657,753	-				+0.3
5,657,753	-				-0.7
5,657,753	-				+0.2
5,657,756	+				+0.3
5,657,756	+				+0.3
5,657,756	+				+0.1
5,657,757	-				-1.0
5,657,757	-				-0.4
5,657,757	-				+0.7
5,657,757	-				-0.1
5,657,757	-				+0.7
5,658,744	+				+0.9
5,658,744	+				+0.7
5,658,745	-				+1.4
5,658,745	-				+1.4
5,658,745	-				+1.6
5,658,745	-				+0.8
5,658,857	-				-0.9
5,658,863	+				+1.0
5,658,863	+				+0.6
5,658,863	+				+1.1
5,658,878	+				-0.1
5,658,890	-				-1.0
5,658,926	+				+0.4
5,658,926	+				-0.2
5,658,926	+				+1.0
5,658,926	+				+0.6
5,658,926	+				-0.5
5,658,926	+				+0.6
5,658,926	+				-0.1
5,658,926	+				-0.5
5,658,927	-				-0.8
5,658,927	-				+0.1
5,658,927	-				+0.3
5,658,933	+				+0.6
5,658,933	+				-0.6
5,658,933	+				+0.7
5,658,933	+				-0.8
5,658,933	+				+0.0
5,658,933	+				+0.9
5,658,933	+				-0.1
5,658,933	+				+1.1
5,658,933	+				+0.8
5,658,933	+				+0.9
5,658,933	+				+0.6
5,658,933	+				+0.5
5,658,933	+				+0.3
5,658,934	-				+1.9
5,658,934	-				-1.2
5,658,934	-				+0.6
5,658,934	-				-0.4
5,658,934	-				-0.1
5,658,934	-				+0.3
5,658,934	-				+1.0
5,658,934	-				-0.6
5,658,934	-				+0.1
5,658,934	-				-0.1
5,658,934	-				-0.5
5,658,934	-				-0.7
5,658,934	-				+0.5
5,658,937	+				-0.0
5,658,937	+				+0.2
5,658,937	+				+0.1
5,658,937	+				-0.4
5,658,937	+				-1.0
5,658,937	+				+0.6
5,658,937	+				-0.1
5,658,937	+				-0.0
5,658,937	+				+0.3
5,658,937	+				+0.1
5,658,937	+				+0.2
5,658,937	+				+1.2
5,658,937	+				+0.7
5,658,937	+				-0.0
5,658,937	+				+1.3
5,658,937	+				+0.5
5,658,937	+				-0.3
5,658,937	+				-0.0
5,658,937	+				-1.0
5,658,937	+				-0.8
5,658,937	+				+0.6
5,658,937	+				+0.6
5,658,938	-				-0.3
5,658,938	-				-0.3
5,658,938	-				-0.1
5,658,938	-				+0.8
5,658,938	-				-2.0
5,658,938	-				+0.3
5,658,938	-				-0.1
5,658,938	-				+0.6
5,658,938	-				-0.9
5,658,938	-				+0.5
5,658,938	-				+0.2
5,658,938	-				-0.3
5,658,938	-				+0.9
5,658,938	-				+0.2
5,659,043	+				+0.5
5,659,044	-				+1.1
5,659,044	-				-0.1
5,659,044	-				-0.9
5,659,142	+		PFLU_RS25335	0.17	-0.5
5,659,142	+		PFLU_RS25335	0.17	+0.2
5,659,143	-		PFLU_RS25335	0.17	+0.0
5,659,143	-		PFLU_RS25335	0.17	+0.1
5,659,143	-		PFLU_RS25335	0.17	-2.2
5,659,220	+		PFLU_RS25335	0.27	+0.3
5,659,221	-		PFLU_RS25335	0.27	-0.7
5,659,221	-		PFLU_RS25335	0.27	-0.7
5,659,221	-		PFLU_RS25335	0.27	+1.5
5,659,227	+		PFLU_RS25335	0.28	+0.4
5,659,228	-		PFLU_RS25335	0.28	-0.4
5,659,228	-		PFLU_RS25335	0.28	-0.1
5,659,228	-		PFLU_RS25335	0.28	+0.0
5,659,252	-		PFLU_RS25335	0.31	-0.2
5,659,291	+		PFLU_RS25335	0.36	-0.5
5,659,291	+		PFLU_RS25335	0.36	-1.3
5,659,291	+		PFLU_RS25335	0.36	+0.1
5,659,291	+		PFLU_RS25335	0.36	-0.9
5,659,291	+		PFLU_RS25335	0.36	+0.1
5,659,292	-		PFLU_RS25335	0.36	-0.6
5,659,295	-		PFLU_RS25335	0.37	-0.1
5,659,295	-		PFLU_RS25335	0.37	-0.4
5,659,436	+		PFLU_RS25335	0.55	-0.2
5,659,437	-		PFLU_RS25335	0.55	+0.3
5,659,465	+		PFLU_RS25335	0.59	+0.2
5,659,466	-		PFLU_RS25335	0.59	+0.0
5,659,547	+		PFLU_RS25335	0.70	+0.5
5,659,547	+		PFLU_RS25335	0.70	+0.4
5,659,547	+		PFLU_RS25335	0.70	-0.8
5,659,547	+		PFLU_RS25335	0.70	-0.5
5,659,547	+		PFLU_RS25335	0.70	+0.3
5,659,547	+		PFLU_RS25335	0.70	+0.5
5,659,548	-		PFLU_RS25335	0.70	-1.5
5,659,548	-		PFLU_RS25335	0.70	-0.1
5,659,548	-		PFLU_RS25335	0.70	+0.5
5,659,649	+		PFLU_RS25335	0.83	-0.6
5,659,649	+		PFLU_RS25335	0.83	+0.1
5,659,650	-		PFLU_RS25335	0.83	-0.5