Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07010

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,567,364	+		PFLU_RS07005	0.28	-0.1
1,567,365	-		PFLU_RS07005	0.28	-0.2
1,567,365	-		PFLU_RS07005	0.28	+1.2
1,567,438	+		PFLU_RS07005	0.36	+0.6
1,567,438	+		PFLU_RS07005	0.36	+0.4
1,567,438	+		PFLU_RS07005	0.36	-0.3
1,567,438	+		PFLU_RS07005	0.36	-0.6
1,567,439	-		PFLU_RS07005	0.36	-0.3
1,567,439	-		PFLU_RS07005	0.36	+0.7
1,567,439	-		PFLU_RS07005	0.36	-0.2
1,567,439	-		PFLU_RS07005	0.36	+0.4
1,567,439	-		PFLU_RS07005	0.36	+0.0
1,567,473	+		PFLU_RS07005	0.40	-0.3
1,567,473	+		PFLU_RS07005	0.40	-0.1
1,567,473	+		PFLU_RS07005	0.40	-0.4
1,567,473	+		PFLU_RS07005	0.40	-0.1
1,567,473	+		PFLU_RS07005	0.40	-0.1
1,567,473	+		PFLU_RS07005	0.40	-0.2
1,567,473	+		PFLU_RS07005	0.40	-0.1
1,567,473	+		PFLU_RS07005	0.40	+0.4
1,567,473	+		PFLU_RS07005	0.40	+1.0
1,567,473	+		PFLU_RS07005	0.40	+0.6
1,567,473	+		PFLU_RS07005	0.40	-0.9
1,567,474	-		PFLU_RS07005	0.40	+0.9
1,567,474	-		PFLU_RS07005	0.40	+0.0
1,567,474	-		PFLU_RS07005	0.40	+0.2
1,567,474	-		PFLU_RS07005	0.40	+0.2
1,567,474	-		PFLU_RS07005	0.40	+0.8
1,567,474	-		PFLU_RS07005	0.40	-0.0
1,567,474	-		PFLU_RS07005	0.40	+0.0
1,567,611	+		PFLU_RS07005	0.55	+0.2
1,567,612	-		PFLU_RS07005	0.55	+0.9
1,567,633	+		PFLU_RS07005	0.58	+0.7
1,567,633	+		PFLU_RS07005	0.58	+0.4
1,567,633	+		PFLU_RS07005	0.58	+0.0
1,567,633	+		PFLU_RS07005	0.58	+0.1
1,567,633	+		PFLU_RS07005	0.58	+0.4
1,567,633	+		PFLU_RS07005	0.58	+1.1
1,567,633	+		PFLU_RS07005	0.58	+0.6
1,567,633	+		PFLU_RS07005	0.58	+0.7
1,567,633	+		PFLU_RS07005	0.58	-1.2
1,567,633	+		PFLU_RS07005	0.58	+0.7
1,567,634	-		PFLU_RS07005	0.58	+0.4
1,567,634	-		PFLU_RS07005	0.58	-1.0
1,567,634	-		PFLU_RS07005	0.58	-0.3
1,567,634	-		PFLU_RS07005	0.58	-0.3
1,567,634	-		PFLU_RS07005	0.58	+0.8
1,567,634	-		PFLU_RS07005	0.58	-0.6
1,567,634	-		PFLU_RS07005	0.58	+0.9
1,567,634	-		PFLU_RS07005	0.58	-0.2
1,567,634	-		PFLU_RS07005	0.58	+1.2
1,567,657	-		PFLU_RS07005	0.60	-1.2
1,567,685	+		PFLU_RS07005	0.63	+0.5
1,567,685	+		PFLU_RS07005	0.63	-0.1
1,567,686	-		PFLU_RS07005	0.63	+0.0
1,567,686	-		PFLU_RS07005	0.63	+0.5
1,567,686	-		PFLU_RS07005	0.63	-0.2
1,567,686	-		PFLU_RS07005	0.63	+0.8
1,567,693	+		PFLU_RS07005	0.64	+0.1
1,567,693	+		PFLU_RS07005	0.64	-1.0
1,567,693	+		PFLU_RS07005	0.64	+0.4
1,567,693	+		PFLU_RS07005	0.64	+0.5
1,567,693	+		PFLU_RS07005	0.64	+0.1
1,567,693	+		PFLU_RS07005	0.64	+1.2
1,567,693	+		PFLU_RS07005	0.64	+0.2
1,567,694	-		PFLU_RS07005	0.64	+0.0
1,567,694	-		PFLU_RS07005	0.64	+1.4
1,567,694	-		PFLU_RS07005	0.64	+0.0
1,567,694	-		PFLU_RS07005	0.64	-1.0
1,567,694	-		PFLU_RS07005	0.64	+0.2
1,567,694	-		PFLU_RS07005	0.64	-0.1
1,567,694	-		PFLU_RS07005	0.64	-0.2
1,567,712	+		PFLU_RS07005	0.66	-0.5
1,567,712	+		PFLU_RS07005	0.66	-0.2
1,567,712	+		PFLU_RS07005	0.66	+0.2
1,567,712	+		PFLU_RS07005	0.66	-0.5
1,567,712	+		PFLU_RS07005	0.66	-0.3
1,567,712	+		PFLU_RS07005	0.66	+0.8
1,567,712	+		PFLU_RS07005	0.66	-0.6
1,567,712	+		PFLU_RS07005	0.66	-0.4
1,567,712	+		PFLU_RS07005	0.66	+0.1
1,567,712	+		PFLU_RS07005	0.66	-0.8
1,567,712	+		PFLU_RS07005	0.66	-0.1
1,567,712	+		PFLU_RS07005	0.66	+1.1
1,567,712	+		PFLU_RS07005	0.66	-0.0
1,567,712	+		PFLU_RS07005	0.66	-0.7
1,567,712	+		PFLU_RS07005	0.66	-0.2
1,567,712	+		PFLU_RS07005	0.66	-1.5
1,567,712	+		PFLU_RS07005	0.66	+0.4
1,567,712	+		PFLU_RS07005	0.66	+0.5
1,567,712	+		PFLU_RS07005	0.66	-0.2
1,567,712	+		PFLU_RS07005	0.66	+0.1
1,567,712	+		PFLU_RS07005	0.66	-0.2
1,567,712	+		PFLU_RS07005	0.66	+0.0
1,567,712	+		PFLU_RS07005	0.66	-0.7
1,567,713	-		PFLU_RS07005	0.66	-0.3
1,567,713	-		PFLU_RS07005	0.66	-0.2
1,567,713	-		PFLU_RS07005	0.66	-0.5
1,567,713	-		PFLU_RS07005	0.66	-0.5
1,567,713	-		PFLU_RS07005	0.66	-1.0
1,567,713	-		PFLU_RS07005	0.66	+0.3
1,567,713	-		PFLU_RS07005	0.66	+0.5
1,567,713	-		PFLU_RS07005	0.66	-0.8
1,567,713	-		PFLU_RS07005	0.66	-0.4
1,567,713	-		PFLU_RS07005	0.66	-0.4
1,567,713	-		PFLU_RS07005	0.66	-0.8
1,567,713	-		PFLU_RS07005	0.66	+0.8
1,567,713	-		PFLU_RS07005	0.66	+0.4
1,567,713	-		PFLU_RS07005	0.66	+0.3
1,567,713	-		PFLU_RS07005	0.66	-0.4
1,567,713	-		PFLU_RS07005	0.66	-1.5
1,567,713	-		PFLU_RS07005	0.66	-0.6
1,567,713	-		PFLU_RS07005	0.66	-0.2
1,567,713	-		PFLU_RS07005	0.66	+0.3
1,567,713	-		PFLU_RS07005	0.66	+0.2
1,567,713	-		PFLU_RS07005	0.66	+0.2
1,567,713	-		PFLU_RS07005	0.66	+1.6
1,567,852	-		PFLU_RS07005	0.81	+0.1
1,567,878	+		PFLU_RS07005	0.84	-0.9
1,567,878	+		PFLU_RS07005	0.84	+0.4
1,567,879	-		PFLU_RS07005	0.84	-0.4
1,567,920	+		PFLU_RS07005	0.89	-0.5
1,567,920	+		PFLU_RS07005	0.89	+0.0
1,567,920	+		PFLU_RS07005	0.89	-0.0
1,567,921	-		PFLU_RS07005	0.89	-0.4
1,568,081	+		PFLU_RS30455	0.41	-0.7
1,568,081	+		PFLU_RS30455	0.41	+0.1
1,568,081	+		PFLU_RS30455	0.41	-0.3
1,568,081	+		PFLU_RS30455	0.41	+1.2
1,568,081	+		PFLU_RS30455	0.41	-0.2
1,568,082	-		PFLU_RS30455	0.42	+0.9
1,568,082	-		PFLU_RS30455	0.42	-0.4
1,568,082	-		PFLU_RS30455	0.42	+0.2
1,568,082	-		PFLU_RS30455	0.42	-0.1
1,568,082	-		PFLU_RS30455	0.42	+0.4
1,568,115	+		PFLU_RS30455	0.69	-0.3
1,568,115	+		PFLU_RS30455	0.69	-0.9
1,568,115	+		PFLU_RS30455	0.69	+0.9
1,568,115	+		PFLU_RS30455	0.69	+0.3
1,568,115	+		PFLU_RS30455	0.69	-0.1
1,568,115	+		PFLU_RS30455	0.69	-1.0
1,568,115	+		PFLU_RS30455	0.69	-0.6
1,568,115	+		PFLU_RS30455	0.69	-0.0
1,568,115	+		PFLU_RS30455	0.69	-0.4
1,568,115	+		PFLU_RS30455	0.69	-0.2
1,568,115	+		PFLU_RS30455	0.69	-0.9
1,568,115	+		PFLU_RS30455	0.69	+0.2
1,568,115	+		PFLU_RS30455	0.69	-0.2
1,568,115	+		PFLU_RS30455	0.69	-0.5
1,568,115	+		PFLU_RS30455	0.69	-0.6
1,568,115	+		PFLU_RS30455	0.69	-1.1
1,568,115	+		PFLU_RS30455	0.69	+0.2
1,568,116	-		PFLU_RS30455	0.70	-0.6
1,568,116	-		PFLU_RS30455	0.70	-1.2
1,568,116	-		PFLU_RS30455	0.70	-0.0
1,568,116	-		PFLU_RS30455	0.70	-0.7
1,568,116	-		PFLU_RS30455	0.70	+1.2
1,568,116	-		PFLU_RS30455	0.70	-1.1
1,568,116	-		PFLU_RS30455	0.70	-0.0
1,568,116	-		PFLU_RS30455	0.70	-0.3
1,568,116	-		PFLU_RS30455	0.70	-1.5
1,568,116	-		PFLU_RS30455	0.70	+0.2
1,568,116	-		PFLU_RS30455	0.70	+0.6
1,568,116	-		PFLU_RS30455	0.70	-0.7
1,568,116	-		PFLU_RS30455	0.70	-0.1
1,568,116	-		PFLU_RS30455	0.70	+0.6
1,568,116	-		PFLU_RS30455	0.70	-0.4
1,568,129	+		PFLU_RS30455	0.80	-0.4
1,568,129	+		PFLU_RS30455	0.80	+0.5
1,568,129	+		PFLU_RS30455	0.80	+0.1
1,568,129	+		PFLU_RS30455	0.80	+0.4
1,568,129	+		PFLU_RS30455	0.80	+1.8
1,568,129	+		PFLU_RS30455	0.80	-0.2
1,568,129	+		PFLU_RS30455	0.80	+1.0
1,568,129	+		PFLU_RS30455	0.80	-0.3
1,568,129	+		PFLU_RS30455	0.80	+0.8
1,568,130	-		PFLU_RS30455	0.81	+0.7
1,568,130	-		PFLU_RS30455	0.81	-0.1
1,568,130	-		PFLU_RS30455	0.81	-0.3
1,568,130	-		PFLU_RS30455	0.81	+0.2
1,568,131	+		PFLU_RS30455	0.82	+0.8
1,568,132	-		PFLU_RS30455	0.83	+0.8
1,568,132	-		PFLU_RS30455	0.83	+0.3
1,568,132	-		PFLU_RS30455	0.83	+0.3
1,568,160	+				+0.1
1,568,160	+				+0.6
1,568,160	+				+0.4
1,568,160	+				-1.0
1,568,160	+				-0.7
1,568,160	+				-0.7
1,568,160	+				+0.1
1,568,160	+				-0.8
1,568,160	+				-0.8
1,568,160	+				-0.1
1,568,160	+				-0.6
1,568,160	+				+0.3
1,568,160	+				+0.6
1,568,160	+				+0.2
1,568,160	+				+0.2
1,568,160	+				-0.1
1,568,160	+				-0.3
1,568,160	+				+0.1
1,568,160	+				+0.4
1,568,160	+				+0.1
1,568,160	+				+0.8
1,568,160	+				-0.6
1,568,160	+				-0.1
1,568,160	+				+1.1
1,568,160	+				-0.9
1,568,160	+				+0.4
1,568,160	+				-0.7
1,568,160	+				-0.5
1,568,160	+				+0.3
1,568,160	+				+0.0
1,568,160	+				+0.9
1,568,160	+				+0.0
1,568,160	+				+1.5
1,568,160	+				+0.7
1,568,160	+				+1.1
1,568,160	+				+0.3
1,568,160	+				-0.7
1,568,160	+				+0.4
1,568,160	+				+0.4
1,568,160	+				-1.2
1,568,160	+				+0.1
1,568,160	+				-0.1
1,568,161	-				-0.1
1,568,161	-				-0.1
1,568,161	-				+1.1
1,568,161	-				+0.1
1,568,161	-				+0.6
1,568,161	-				+0.9
1,568,161	-				+1.4
1,568,161	-				-0.1
1,568,161	-				+0.2
1,568,161	-				+0.2
1,568,161	-				+0.2
1,568,161	-				+0.5
1,568,161	-				-0.4
1,568,161	-				+1.2
1,568,161	-				+0.2
1,568,161	-				-0.1
1,568,161	-				-0.9
1,568,161	-				+0.2
1,568,161	-				-0.4
1,568,161	-				+1.0
1,568,161	-				+1.0
1,568,161	-				+0.5
1,568,161	-				-0.1
1,568,161	-				+1.5
1,568,161	-				+0.9
1,568,161	-				+0.3
1,568,161	-				+0.2
1,568,161	-				+0.8
1,568,161	-				-0.0
1,568,161	-				+0.6
1,568,161	-				+0.1
1,568,161	-				-1.0
1,568,161	-				-0.4
1,568,161	-				+0.1
1,568,161	-				-0.1
1,568,163	+				+0.5
1,568,163	+				+0.1
1,568,163	+				+0.2
1,568,163	+				+1.8
1,568,163	+				-0.5
1,568,163	+				+0.6
1,568,163	+				-0.0
1,568,163	+				+0.1
1,568,163	+				+0.4
1,568,163	+				-0.6
1,568,163	+				+0.2
1,568,163	+				+1.5
1,568,163	+				-0.4
1,568,163	+				-0.1
1,568,163	+				-0.3
1,568,163	+				-1.5
1,568,163	+				-0.1
1,568,163	+				+0.8
1,568,163	+				-1.2
1,568,163	+				+0.7
1,568,163	+				+0.1
1,568,163	+				+1.1
1,568,163	+				+0.4
1,568,163	-				-0.0
1,568,164	-				-0.4
1,568,164	-				-0.1
1,568,164	-				-0.1
1,568,164	-				+0.1
1,568,164	-				+0.7
1,568,164	-				+1.2
1,568,164	-				-0.8
1,568,164	-				-0.0
1,568,164	-				+0.6
1,568,164	-				-1.3
1,568,164	-				+0.2
1,568,164	-				-0.9
1,568,164	-				+0.3
1,568,164	-				+0.4
1,568,164	-				-1.7
1,568,164	-				+0.3
1,568,164	-				-1.1
1,568,164	-				+0.2
1,568,224	+				-0.7
1,568,224	+				-1.1
1,568,225	-				-0.7
1,568,294	+		PFLU_RS07010	0.15	+0.5
1,568,294	+		PFLU_RS07010	0.15	+0.6
1,568,294	+		PFLU_RS07010	0.15	+0.5
1,568,294	+		PFLU_RS07010	0.15	-0.0
1,568,294	+		PFLU_RS07010	0.15	+0.9
1,568,294	+		PFLU_RS07010	0.15	-0.8
1,568,294	+		PFLU_RS07010	0.15	+0.4
1,568,295	-		PFLU_RS07010	0.16	+0.3
1,568,295	-		PFLU_RS07010	0.16	-0.1
1,568,295	-		PFLU_RS07010	0.16	-0.4
1,568,295	-		PFLU_RS07010	0.16	-0.5
1,568,295	-		PFLU_RS07010	0.16	+0.5
1,568,345	+		PFLU_RS07010	0.28	-0.4
1,568,364	+		PFLU_RS07010	0.32	-0.3
1,568,364	+		PFLU_RS07010	0.32	-0.5
1,568,364	+		PFLU_RS07010	0.32	+0.4
1,568,364	+		PFLU_RS07010	0.32	+1.3
1,568,364	+		PFLU_RS07010	0.32	+0.3
1,568,365	-		PFLU_RS07010	0.33	-0.0
1,568,365	-		PFLU_RS07010	0.33	+1.0
1,568,365	-		PFLU_RS07010	0.33	+0.5
1,568,365	-		PFLU_RS07010	0.33	+0.1
1,568,417	+		PFLU_RS07010	0.45	-0.6
1,568,418	-		PFLU_RS07010	0.45	-0.2
1,568,418	-		PFLU_RS07010	0.45	+1.0
1,568,418	-		PFLU_RS07010	0.45	-0.6
1,568,426	+		PFLU_RS07010	0.47	+0.6
1,568,427	-		PFLU_RS07010	0.48	+0.9
1,568,427	-		PFLU_RS07010	0.48	+1.3
1,568,427	-		PFLU_RS07010	0.48	-0.1
1,568,532	-		PFLU_RS07010	0.73	+0.9
1,568,633	+				-0.4
1,568,633	+				+0.6
1,568,640	-				-0.2
1,568,665	+				+0.1
1,568,713	-				-0.6
1,568,713	-				+0.1
1,568,737	+				+0.8
1,568,737	+				+0.4
1,568,737	+				-1.6
1,568,738	-				+0.6
1,568,738	-				-0.4
1,568,738	-				+0.1
1,568,738	-				+0.8
1,568,741	+				+0.6
1,568,741	+				-1.0
1,568,741	+				+0.4
1,568,742	-				+0.6
1,568,742	-				-0.6
1,568,742	-				+0.5
1,568,742	-				+0.1
1,568,742	-				-0.6
1,568,746	+				+0.1
1,568,746	+				+0.8
1,568,749	+				+1.9
1,568,749	+				-0.4
1,568,749	+				-0.2
1,568,750	-				-0.5
1,568,750	-				+0.9
1,568,868	+		PFLU_RS07015	0.27	+0.5
1,568,939	+		PFLU_RS07015	0.38	+0.1
1,568,939	+		PFLU_RS07015	0.38	-0.5
1,568,940	-		PFLU_RS07015	0.38	-0.2
1,568,940	-		PFLU_RS07015	0.38	+0.6
1,568,940	-		PFLU_RS07015	0.38	-1.6
1,568,940	-		PFLU_RS07015	0.38	+0.3
1,569,085	+		PFLU_RS07015	0.61	-0.4
1,569,176	+		PFLU_RS07015	0.75	+0.2
1,569,224	+		PFLU_RS07015	0.82	+0.7
1,569,224	+		PFLU_RS07015	0.82	+0.5
1,569,225	-		PFLU_RS07015	0.82	-0.7
1,569,225	-		PFLU_RS07015	0.82	-0.1
1,569,225	-		PFLU_RS07015	0.82	+1.1
1,569,393	+				-0.7
1,569,432	+				-0.4
1,569,432	+				-1.7
1,569,432	+				+0.2
1,569,432	+				+0.7
1,569,433	-				-0.0
1,569,433	-				-0.6
1,569,433	-				-0.0
1,569,640	+		PFLU_RS07020	0.35	-1.5
1,569,640	+		PFLU_RS07020	0.35	+0.6
1,569,640	+		PFLU_RS07020	0.35	+0.5
1,569,640	+		PFLU_RS07020	0.35	+0.0
1,569,640	+		PFLU_RS07020	0.35	-0.6
1,569,641	-		PFLU_RS07020	0.35	-0.6
1,569,641	-		PFLU_RS07020	0.35	+1.0