Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30740

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,723,765	+				+1.3
2,723,766	-				+0.3
2,723,766	-				+0.1
2,723,857	+				-0.5
2,723,858	-				-0.8
2,723,897	-		PFLU_RS30735	0.17	+0.2
2,723,927	+		PFLU_RS30735	0.25	+0.0
2,723,927	+		PFLU_RS30735	0.25	+0.2
2,723,927	+		PFLU_RS30735	0.25	+0.9
2,723,927	+		PFLU_RS30735	0.25	+0.1
2,723,927	+		PFLU_RS30735	0.25	+0.5
2,723,927	+		PFLU_RS30735	0.25	+0.3
2,723,928	-		PFLU_RS30735	0.25	-0.9
2,723,928	-		PFLU_RS30735	0.25	+0.8
2,723,928	-		PFLU_RS30735	0.25	+1.0
2,723,928	-		PFLU_RS30735	0.25	-0.4
2,723,928	-		PFLU_RS30735	0.25	+0.5
2,723,948	+		PFLU_RS30735	0.30	+1.2
2,723,951	+		PFLU_RS30735	0.31	-0.9
2,723,951	+		PFLU_RS30735	0.31	-1.6
2,723,951	+		PFLU_RS30735	0.31	+0.2
2,723,951	+		PFLU_RS30735	0.31	+1.0
2,723,951	+		PFLU_RS30735	0.31	+0.0
2,723,952	-		PFLU_RS30735	0.31	-0.7
2,723,952	-		PFLU_RS30735	0.31	-1.3
2,724,009	+		PFLU_RS30735	0.46	+0.0
2,724,010	-		PFLU_RS30735	0.46	+0.3
2,724,112	+		PFLU_RS30735	0.72	+1.2
2,724,113	-		PFLU_RS30735	0.73	+1.0
2,724,135	+		PFLU_RS30735	0.78	+0.1
2,724,166	+		PFLU_RS30735	0.86	+0.9
2,724,166	+		PFLU_RS30735	0.86	+0.1
2,724,167	-		PFLU_RS30735	0.86	+0.5
2,724,199	+				-0.2
2,724,199	+				-0.4
2,724,235	-				-0.7
2,724,260	+				+0.1
2,724,273	-				+0.5
2,724,273	-				+0.9
2,724,328	+				+0.8
2,724,328	+				-0.3
2,724,328	+				+1.5
2,724,329	-				+0.2
2,724,329	-				-0.7
2,724,384	-				+1.1
2,724,384	-				+1.4
2,724,403	+				+0.2
2,724,404	-				-0.3
2,724,404	-				+0.7
2,724,404	-				+0.4
2,724,404	-				-0.1
2,724,432	+				+0.4
2,724,432	+				+0.8
2,724,433	-				+1.8
2,724,433	-				+1.2
2,724,433	-				-0.3
2,724,444	+				-1.1
2,724,444	+				+1.3
2,724,444	+				-0.6
2,724,444	+				-0.5
2,724,445	-				+0.9
2,724,445	-				-3.0
2,724,445	-				+1.4
2,724,498	+				+0.1
2,724,595	+				+0.3
2,724,595	+				+0.2
2,724,595	+				-0.0
2,724,596	-				+0.6
2,724,596	-				-0.4
2,724,598	+				-1.1
2,724,598	+				-1.2
2,724,613	+				+0.4
2,724,613	+				+0.2
2,724,613	+				+0.7
2,724,613	+				+0.0
2,724,613	+				-0.4
2,724,613	+				+1.1
2,724,614	-				+0.4
2,724,614	-				+0.6
2,724,614	-				+0.7
2,724,614	-				+2.5
2,724,614	-				-0.2
2,724,614	-				+0.1
2,724,650	-				+0.2
2,724,714	+				+0.4
2,724,745	-				+1.0
2,724,750	+				+0.4
2,724,750	+				+0.1
2,724,750	+				-0.2
2,724,750	+				-0.9
2,724,751	-				-0.2
2,724,751	-				+0.1
2,724,753	+				-0.4
2,724,754	-				-0.1
2,724,754	-				+1.0
2,724,754	-				-1.5
2,724,754	-				-0.2
2,724,762	+				+0.2
2,724,762	+				-0.6
2,724,763	-				-0.9
2,724,763	-				+0.1
2,724,922	+		PFLU_RS30740	0.15	+2.4
2,725,172	-		PFLU_RS30740	0.35	+0.3
2,725,281	+		PFLU_RS30740	0.44	+0.1
2,725,281	+		PFLU_RS30740	0.44	+0.4
2,725,281	+		PFLU_RS30740	0.44	-0.4
2,725,282	-		PFLU_RS30740	0.44	+0.2
2,725,282	-		PFLU_RS30740	0.44	+0.3
2,725,282	-		PFLU_RS30740	0.44	-0.1
2,725,442	+		PFLU_RS30740	0.57	-0.4
2,725,511	+		PFLU_RS30740	0.63	+0.1
2,725,585	-		PFLU_RS30740	0.69	+0.6
2,725,692	+		PFLU_RS30740	0.78	-0.3
2,725,692	+		PFLU_RS30740	0.78	+0.8
2,725,692	+		PFLU_RS30740	0.78	+1.0
2,725,773	-		PFLU_RS30740	0.84	+0.9
2,725,773	-		PFLU_RS30740	0.84	+0.4
2,725,815	+		PFLU_RS30740	0.88	-0.1
2,725,815	+		PFLU_RS30740	0.88	+0.4
2,725,815	+		PFLU_RS30740	0.88	-0.4
2,725,816	-		PFLU_RS30740	0.88	-1.4
2,725,816	-		PFLU_RS30740	0.88	+0.7
2,725,884	+				+0.7
2,725,884	+				-0.2
2,725,884	+				+0.8
2,725,884	+				-0.6
2,725,885	-				-0.2
2,725,885	-				+0.2
2,725,885	-				+0.5
2,726,009	-				+0.3
2,726,009	-				+0.5
2,726,021	+		PFLU_RS31575	0.16	+0.9
2,726,021	+		PFLU_RS31575	0.16	+0.4
2,726,021	+		PFLU_RS31575	0.16	-0.5
2,726,021	+		PFLU_RS31575	0.16	+0.2
2,726,021	+		PFLU_RS31575	0.16	+0.7
2,726,021	+		PFLU_RS31575	0.16	+0.6
2,726,021	+		PFLU_RS31575	0.16	-0.1
2,726,021	+		PFLU_RS31575	0.16	+1.1
2,726,021	+		PFLU_RS31575	0.16	-0.4
2,726,021	+		PFLU_RS31575	0.16	+0.1
2,726,021	+		PFLU_RS31575	0.16	+1.0
2,726,021	+		PFLU_RS31575	0.16	-0.2
2,726,022	-		PFLU_RS31575	0.17	-0.7
2,726,022	-		PFLU_RS31575	0.17	+0.4
2,726,022	-		PFLU_RS31575	0.17	-0.1
2,726,022	-		PFLU_RS31575	0.17	-0.5
2,726,022	-		PFLU_RS31575	0.17	+0.5
2,726,022	-		PFLU_RS31575	0.17	-0.5
2,726,022	-		PFLU_RS31575	0.17	+0.5
2,726,022	-		PFLU_RS31575	0.17	+0.7
2,726,022	-		PFLU_RS31575	0.17	+0.4
2,726,028	+		PFLU_RS31575	0.22	-0.1
2,726,029	-		PFLU_RS31575	0.23	+1.9
2,726,029	-		PFLU_RS31575	0.23	+1.3
2,726,029	-		PFLU_RS31575	0.23	-2.6
2,726,085	+		PFLU_RS31575	0.71	-0.4
2,726,120	+				+0.1
2,726,120	+				+1.4
2,726,120	+				+1.0
2,726,120	+				+0.1
2,726,121	-				+0.0
2,726,121	-				+0.2
2,726,121	-				-0.5
2,726,157	+				-0.7
2,726,157	+				+0.6
2,726,157	+				-0.4
2,726,157	+				+0.4
2,726,157	+				+0.3
2,726,158	-				-2.2
2,726,158	-				-0.3
2,726,158	-				+0.8
2,726,158	-				+0.4
2,726,159	+				-0.6
2,726,159	+				-0.2
2,726,159	+				+0.6
2,726,160	-				+0.1
2,726,160	-				+0.8
2,726,160	-				+0.7
2,726,160	-				-0.1
2,726,160	-				+1.0
2,726,160	-				-0.1
2,726,160	-				+0.5
2,726,160	-				-0.3
2,726,160	-				-0.3
2,726,160	-				-0.7
2,726,195	+				-1.9
2,726,196	-				-0.1
2,726,203	+				+0.1
2,726,246	+				-0.3
2,726,246	+				+0.3
2,726,246	+				+0.3
2,726,246	+				+0.7
2,726,246	+				+0.1
2,726,260	+				+0.1
2,726,260	+				+1.2
2,726,260	+				-0.1
2,726,261	-				+1.8
2,726,261	-				+1.3
2,726,279	+				-0.2
2,726,280	-				-0.7
2,726,283	+				+1.1
2,726,283	+				-0.5
2,726,283	+				+0.4
2,726,283	+				+0.5
2,726,283	+				+0.0
2,726,283	+				-0.7
2,726,283	+				-0.2
2,726,283	+				-0.2
2,726,283	+				-0.0
2,726,283	+				+0.6
2,726,284	-				+1.0
2,726,284	-				+0.6
2,726,288	+				+0.4
2,726,288	+				+0.7
2,726,289	-				-1.0
2,726,336	+				-0.1
2,726,336	+				-0.5
2,726,337	-				+0.2
2,726,373	+				+0.5
2,726,373	+				-0.1
2,726,373	+				+0.0
2,726,373	+				+0.5
2,726,374	-				+0.6
2,726,374	-				-0.4
2,726,374	-				-0.1
2,726,374	-				-0.0
2,726,374	-				+1.3
2,726,374	-				+0.3
2,726,377	+				-0.1
2,726,378	-				+0.3
2,726,378	-				-0.4
2,726,378	-				-0.7
2,726,378	-				-0.9
2,726,378	-				+1.0
2,726,392	-		PFLU_RS12280	0.12	-0.5
2,726,392	-		PFLU_RS12280	0.12	-0.1
2,726,392	-		PFLU_RS12280	0.12	+0.2
2,726,458	+		PFLU_RS12280	0.26	-0.3
2,726,458	+		PFLU_RS12280	0.26	+0.7
2,726,459	-		PFLU_RS12280	0.26	+0.6
2,726,459	-		PFLU_RS12280	0.26	-0.3
2,726,569	+		PFLU_RS12280	0.49	-0.9
2,726,569	+		PFLU_RS12280	0.49	-0.6
2,726,569	+		PFLU_RS12280	0.49	+0.8
2,726,569	+		PFLU_RS12280	0.49	+1.6
2,726,570	-		PFLU_RS12280	0.49	-0.1
2,726,570	-		PFLU_RS12280	0.49	+1.1
2,726,570	-		PFLU_RS12280	0.49	+1.0
2,726,570	-		PFLU_RS12280	0.49	+0.4
2,726,570	-		PFLU_RS12280	0.49	+0.1
2,726,629	-		PFLU_RS12280	0.62	-1.4
2,726,629	-		PFLU_RS12280	0.62	-1.9
2,726,629	-		PFLU_RS12280	0.62	-0.3
2,726,644	-		PFLU_RS12280	0.65	+0.2
2,726,644	-		PFLU_RS12280	0.65	+0.6
2,726,688	-		PFLU_RS12280	0.74	+1.1
2,726,712	+		PFLU_RS12280	0.79	-1.6
2,726,712	+		PFLU_RS12280	0.79	-0.0
2,726,713	-		PFLU_RS12280	0.79	-0.6
2,726,748	+		PFLU_RS12280	0.87	+0.0
2,726,755	+		PFLU_RS12280	0.88	+1.9
2,726,755	+		PFLU_RS12280	0.88	-0.7
2,726,755	+		PFLU_RS12280	0.88	-0.2
2,726,755	+		PFLU_RS12280	0.88	+0.4
2,726,755	+		PFLU_RS12280	0.88	-0.7
2,726,755	+		PFLU_RS12280	0.88	+0.5
2,726,755	+		PFLU_RS12280	0.88	+0.0
2,726,755	+		PFLU_RS12280	0.88	-0.2
2,726,756	-		PFLU_RS12280	0.88	+0.2
2,726,756	-		PFLU_RS12280	0.88	+0.2
2,726,756	-		PFLU_RS12280	0.88	+0.7
2,726,756	-		PFLU_RS12280	0.88	+0.1
2,726,756	-		PFLU_RS12280	0.88	+0.3
2,726,756	-		PFLU_RS12280	0.88	+0.1
2,726,756	-		PFLU_RS12280	0.88	+0.0
2,726,756	-		PFLU_RS12280	0.88	-0.1
2,726,756	-		PFLU_RS12280	0.88	-0.6
2,726,756	-		PFLU_RS12280	0.88	-0.1
2,726,759	+		PFLU_RS12280	0.89	-0.7
2,726,759	+		PFLU_RS12280	0.89	-0.4
2,726,759	+		PFLU_RS12280	0.89	-0.6
2,726,759	+		PFLU_RS12280	0.89	+0.4
2,726,759	+		PFLU_RS12280	0.89	+0.3
2,726,759	+		PFLU_RS12280	0.89	+0.5
2,726,760	-		PFLU_RS12280	0.89	-0.1
2,726,760	-		PFLU_RS12280	0.89	+0.8
2,726,760	-		PFLU_RS12280	0.89	+0.0
2,726,760	-		PFLU_RS12280	0.89	-0.2
2,726,760	-		PFLU_RS12280	0.89	+0.1
2,726,760	-		PFLU_RS12280	0.89	-0.1
2,726,760	-		PFLU_RS12280	0.89	+0.0
2,726,847	-		PFLU_RS12285	0.19	-0.1
2,726,872	+		PFLU_RS12285	0.30	+0.5
2,726,886	+		PFLU_RS12285	0.37	+0.5
2,726,886	+		PFLU_RS12285	0.37	-0.4
2,726,886	+		PFLU_RS12285	0.37	+0.1
2,726,886	+		PFLU_RS12285	0.37	-0.2
2,726,886	+		PFLU_RS12285	0.37	-0.2
2,726,886	+		PFLU_RS12285	0.37	-0.1
2,726,886	+		PFLU_RS12285	0.37	+0.9
2,726,886	+		PFLU_RS12285	0.37	-0.0
2,726,886	+		PFLU_RS12285	0.37	-1.1
2,726,886	+		PFLU_RS12285	0.37	+0.1
2,726,886	+		PFLU_RS12285	0.37	+0.3
2,726,886	+		PFLU_RS12285	0.37	-0.1
2,726,887	-		PFLU_RS12285	0.38	-0.2
2,726,887	-		PFLU_RS12285	0.38	-0.6
2,726,887	-		PFLU_RS12285	0.38	+1.0
2,726,887	-		PFLU_RS12285	0.38	-0.6
2,726,887	-		PFLU_RS12285	0.38	-0.4
2,726,887	-		PFLU_RS12285	0.38	-0.4
2,726,887	-		PFLU_RS12285	0.38	+1.5
2,726,887	-		PFLU_RS12285	0.38	-0.9
2,726,887	-		PFLU_RS12285	0.38	-1.2
2,726,887	-		PFLU_RS12285	0.38	-1.1