Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29585

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
6,565,199	+		PFLU_RS29575	0.79	-0.9
6,565,199	+		PFLU_RS29575	0.79	+0.0
6,565,199	+		PFLU_RS29575	0.79	+0.5
6,565,200	-		PFLU_RS29575	0.79	-0.4
6,565,200	-		PFLU_RS29575	0.79	+1.0
6,565,200	-		PFLU_RS29575	0.79	+1.1
6,565,265	-		PFLU_RS29575	0.84	+0.3
6,565,312	+		PFLU_RS29575	0.88	-0.0
6,565,313	-		PFLU_RS29575	0.88	-0.8
6,565,883	+		PFLU_RS29580	0.61	+0.4
6,565,883	+		PFLU_RS29580	0.61	-0.4
6,565,883	+		PFLU_RS29580	0.61	-0.2
6,565,883	+		PFLU_RS29580	0.61	+0.3
6,565,883	+		PFLU_RS29580	0.61	+0.4
6,565,883	+		PFLU_RS29580	0.61	-0.1
6,565,884	-		PFLU_RS29580	0.62	-0.3
6,566,182	+				+0.7
6,566,183	-				-0.3
6,566,183	-				+0.0
6,566,183	-				+1.4
6,566,251	+				-0.3
6,566,252	-				+1.1
6,566,371	+				-0.9
6,566,440	+				-0.5
6,566,440	+				-0.9
6,566,440	+				-0.1
6,566,441	-				-0.6
6,566,441	-				-0.7
6,566,441	-				+0.5
6,566,441	-				-0.8
6,566,703	-		PFLU_RS29585	0.18	-1.1
6,566,703	-		PFLU_RS29585	0.18	+0.0
6,566,750	+		PFLU_RS29585	0.20	-1.2
6,566,751	-		PFLU_RS29585	0.20	+0.6
6,566,819	+		PFLU_RS29585	0.22	-0.7
6,566,819	+		PFLU_RS29585	0.22	-0.7
6,566,819	+		PFLU_RS29585	0.22	-0.4
6,566,820	-		PFLU_RS29585	0.22	-1.2
6,566,848	+		PFLU_RS29585	0.23	+0.1
6,566,848	+		PFLU_RS29585	0.23	-1.1
6,566,848	+		PFLU_RS29585	0.23	+0.7
6,566,848	+		PFLU_RS29585	0.23	+0.3
6,566,848	+		PFLU_RS29585	0.23	-1.1
6,566,953	+		PFLU_RS29585	0.27	+0.5
6,566,953	+		PFLU_RS29585	0.27	-0.1
6,566,953	+		PFLU_RS29585	0.27	-0.5
6,566,953	+		PFLU_RS29585	0.27	+0.0
6,566,954	-		PFLU_RS29585	0.27	-0.6
6,566,954	-		PFLU_RS29585	0.27	+0.3
6,566,954	-		PFLU_RS29585	0.27	+0.1
6,566,954	-		PFLU_RS29585	0.27	+0.3
6,566,954	-		PFLU_RS29585	0.27	+0.8
6,567,241	+		PFLU_RS29585	0.37	+0.4
6,567,241	+		PFLU_RS29585	0.37	+0.0
6,567,241	+		PFLU_RS29585	0.37	-0.6
6,567,241	+		PFLU_RS29585	0.37	-0.5
6,567,241	+		PFLU_RS29585	0.37	-0.0
6,567,242	-		PFLU_RS29585	0.37	-0.4
6,567,242	-		PFLU_RS29585	0.37	+0.6
6,567,242	-		PFLU_RS29585	0.37	+1.2
6,567,242	-		PFLU_RS29585	0.37	+0.1
6,567,266	+		PFLU_RS29585	0.37	-0.0
6,567,266	+		PFLU_RS29585	0.37	-1.6
6,567,370	+		PFLU_RS29585	0.41	-0.4
6,567,371	-		PFLU_RS29585	0.41	-0.3
6,567,371	-		PFLU_RS29585	0.41	-0.4
6,567,371	-		PFLU_RS29585	0.41	-0.1
6,567,371	-		PFLU_RS29585	0.41	-0.3
6,567,565	+		PFLU_RS29585	0.47	-0.5
6,567,565	+		PFLU_RS29585	0.47	-0.2
6,567,566	-		PFLU_RS29585	0.47	+0.2
6,567,566	-		PFLU_RS29585	0.47	+0.9
6,567,566	-		PFLU_RS29585	0.47	+0.2
6,567,566	-		PFLU_RS29585	0.47	-0.3
6,567,693	+		PFLU_RS29585	0.52	-0.5
6,567,693	+		PFLU_RS29585	0.52	-0.2
6,567,693	+		PFLU_RS29585	0.52	+0.5
6,567,694	-		PFLU_RS29585	0.52	+0.6
6,567,871	+		PFLU_RS29585	0.58	+0.7
6,567,871	+		PFLU_RS29585	0.58	-0.1
6,567,872	-		PFLU_RS29585	0.58	-0.1
6,567,872	-		PFLU_RS29585	0.58	+0.1
6,567,877	+		PFLU_RS29585	0.58	-0.3
6,567,877	+		PFLU_RS29585	0.58	-0.4
6,567,877	+		PFLU_RS29585	0.58	+0.4
6,567,877	+		PFLU_RS29585	0.58	+0.7
6,567,877	+		PFLU_RS29585	0.58	+0.6
6,567,877	+		PFLU_RS29585	0.58	-0.2
6,567,877	+		PFLU_RS29585	0.58	-0.3
6,567,878	-		PFLU_RS29585	0.58	-1.1
6,567,878	-		PFLU_RS29585	0.58	-0.4
6,567,878	-		PFLU_RS29585	0.58	+0.0
6,567,878	-		PFLU_RS29585	0.58	-2.0
6,567,980	+		PFLU_RS29585	0.61	-0.2
6,567,980	+		PFLU_RS29585	0.61	+0.1
6,567,981	-		PFLU_RS29585	0.61	+0.7
6,568,077	-		PFLU_RS29585	0.65	+0.1
6,568,100	-		PFLU_RS29585	0.65	+0.1
6,568,254	-		PFLU_RS29585	0.71	+0.0
6,568,349	+		PFLU_RS29585	0.74	+0.8
6,568,350	-		PFLU_RS29585	0.74	-1.0
6,568,513	+		PFLU_RS29585	0.79	-0.1
6,568,514	-		PFLU_RS29585	0.79	-0.2
6,568,514	-		PFLU_RS29585	0.79	+0.5
6,568,540	+		PFLU_RS29585	0.80	-0.0
6,568,562	-		PFLU_RS29585	0.81	-1.6
6,568,615	+		PFLU_RS29585	0.83	-1.0
6,568,615	+		PFLU_RS29585	0.83	+0.4
6,568,615	+		PFLU_RS29585	0.83	+0.3
6,568,615	+		PFLU_RS29585	0.83	+0.4
6,568,615	+		PFLU_RS29585	0.83	-0.5
6,568,616	-		PFLU_RS29585	0.83	+0.5
6,568,616	-		PFLU_RS29585	0.83	+1.3
6,568,616	-		PFLU_RS29585	0.83	-1.2
6,568,616	-		PFLU_RS29585	0.83	-1.2
6,568,616	-		PFLU_RS29585	0.83	+0.6
6,568,616	-		PFLU_RS29585	0.83	-0.7
6,568,775	-		PFLU_RS29585	0.88	-0.5
6,568,870	+				-0.1
6,568,870	+				+1.1
6,568,870	+				-0.9
6,568,870	+				+0.3
6,568,871	-				-0.4
6,568,885	+				-0.0
6,568,885	+				-0.6
6,568,885	+				+0.7
6,568,885	+				-1.0
6,568,885	+				-0.5
6,568,885	+				-0.3
6,568,885	+				-0.7
6,568,885	+				-0.2
6,568,885	+				-0.2
6,568,885	+				+0.4
6,568,885	+				-0.4
6,568,885	+				-0.9
6,568,885	+				-0.5
6,568,885	+				+1.1
6,568,885	+				-0.1
6,568,885	+				-0.3
6,568,885	+				+0.1
6,568,885	+				+0.3
6,568,885	+				-0.8
6,568,885	+				-1.8
6,568,885	+				-0.2
6,568,885	+				+0.6
6,568,885	+				-0.7
6,568,885	+				-0.6
6,568,885	+				-0.2
6,568,885	+				+1.3
6,568,886	-				-0.7
6,568,886	-				+1.4
6,568,886	-				+0.7
6,568,886	-				-0.4
6,568,886	-				+0.3
6,568,886	-				-1.6
6,568,886	-				-0.1
6,568,886	-				+0.5
6,568,886	-				+0.2
6,568,886	-				-0.0
6,568,886	-				+0.9
6,568,886	-				+0.3
6,568,886	-				-0.4
6,568,886	-				-0.2
6,568,886	-				+0.6
6,568,886	-				+0.0
6,568,888	+				+0.0
6,568,888	+				-0.5
6,568,888	+				-0.8
6,568,888	+				-0.6
6,568,888	+				+0.3
6,568,889	-				+0.5
6,568,889	-				+0.2
6,568,889	-				-0.4
6,568,959	-				-0.6
6,569,063	-				+0.0
6,569,108	-				+0.5
6,569,135	+				-0.1
6,569,135	+				+0.0
6,569,135	+				+0.8
6,569,136	-				-0.2
6,569,292	+		PFLU_RS29590	0.23	+0.6
6,569,292	+		PFLU_RS29590	0.23	+0.6
6,569,292	+		PFLU_RS29590	0.23	-0.0
6,569,292	+		PFLU_RS29590	0.23	+2.0
6,569,292	+		PFLU_RS29590	0.23	+0.8
6,569,292	+		PFLU_RS29590	0.23	-0.2
6,569,292	+		PFLU_RS29590	0.23	-0.5
6,569,292	+		PFLU_RS29590	0.23	+1.3
6,569,292	+		PFLU_RS29590	0.23	-0.1
6,569,293	-		PFLU_RS29590	0.23	+1.1
6,569,293	-		PFLU_RS29590	0.23	+1.5
6,569,439	+		PFLU_RS29590	0.43	+0.3
6,569,439	+		PFLU_RS29590	0.43	+0.3
6,569,439	+		PFLU_RS29590	0.43	+0.4
6,569,440	-		PFLU_RS29590	0.44	+0.3
6,569,440	-		PFLU_RS29590	0.44	-0.1
6,569,440	-		PFLU_RS29590	0.44	-1.3
6,569,440	-		PFLU_RS29590	0.44	-0.5
6,569,440	-		PFLU_RS29590	0.44	+0.0
6,569,487	+		PFLU_RS29590	0.50	-0.1
6,569,488	-		PFLU_RS29590	0.50	+0.3
6,569,488	-		PFLU_RS29590	0.50	-0.3
6,569,549	+		PFLU_RS29590	0.59	+0.2
6,569,643	+		PFLU_RS29590	0.72	-0.9
6,569,643	+		PFLU_RS29590	0.72	+0.4
6,569,643	+		PFLU_RS29590	0.72	-0.1
6,569,644	-		PFLU_RS29590	0.72	+0.7
6,569,644	-		PFLU_RS29590	0.72	+0.3
6,569,644	-		PFLU_RS29590	0.72	+0.7
6,569,644	-		PFLU_RS29590	0.72	+0.6
6,569,644	-		PFLU_RS29590	0.72	+0.6
6,569,644	-		PFLU_RS29590	0.72	+0.8
6,569,706	+		PFLU_RS29590	0.81	+0.8
6,569,706	+		PFLU_RS29590	0.81	+0.3
6,569,706	+		PFLU_RS29590	0.81	+0.5
6,569,707	-		PFLU_RS29590	0.81	+0.4
6,569,707	-		PFLU_RS29590	0.81	-0.2
6,569,707	-		PFLU_RS29590	0.81	+0.1
6,569,832	+				+0.1
6,569,832	+				+0.7
6,569,847	+				+0.6
6,569,847	+				+0.6
6,569,847	+				+0.7
6,569,847	+				+0.0
6,569,847	+				+0.4
6,569,848	-				+0.2
6,569,848	-				+1.1
6,569,848	-				+0.7
6,570,062	+		PFLU_RS29595	0.33	-1.0
6,570,063	-		PFLU_RS29595	0.33	+0.6
6,570,063	-		PFLU_RS29595	0.33	-0.2