Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26155

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
5,846,012	+		PFLU_RS26150	0.74	-0.2
5,846,012	+		PFLU_RS26150	0.74	+0.4
5,846,012	+		PFLU_RS26150	0.74	-0.6
5,846,013	-		PFLU_RS26150	0.74	+0.4
5,846,013	-		PFLU_RS26150	0.74	-0.7
5,846,013	-		PFLU_RS26150	0.74	-0.9
5,846,122	+		PFLU_RS26150	0.78	-1.5
5,846,122	+		PFLU_RS26150	0.78	+0.1
5,846,123	-		PFLU_RS26150	0.78	+1.2
5,846,179	+		PFLU_RS26150	0.81	-0.7
5,846,224	+		PFLU_RS26150	0.83	+1.1
5,846,224	+		PFLU_RS26150	0.83	-3.4
5,846,224	+		PFLU_RS26150	0.83	-0.1
5,846,224	+		PFLU_RS26150	0.83	+0.4
5,846,224	+		PFLU_RS26150	0.83	+0.2
5,846,224	+		PFLU_RS26150	0.83	+0.1
5,846,224	+		PFLU_RS26150	0.83	+0.8
5,846,224	+		PFLU_RS26150	0.83	+0.2
5,846,224	+		PFLU_RS26150	0.83	+0.7
5,846,225	-		PFLU_RS26150	0.83	+0.8
5,846,225	-		PFLU_RS26150	0.83	-0.3
5,846,225	-		PFLU_RS26150	0.83	+1.5
5,846,365	+		PFLU_RS26150	0.88	-0.1
5,846,365	+		PFLU_RS26150	0.88	-1.5
5,846,365	+		PFLU_RS26150	0.88	+1.0
5,846,365	+		PFLU_RS26150	0.88	+0.1
5,846,365	+		PFLU_RS26150	0.88	-0.3
5,846,365	+		PFLU_RS26150	0.88	-0.3
5,846,366	-		PFLU_RS26150	0.88	-0.3
5,846,366	-		PFLU_RS26150	0.88	+0.1
5,846,366	-		PFLU_RS26150	0.88	+0.9
5,846,366	-		PFLU_RS26150	0.88	+0.0
5,846,366	-		PFLU_RS26150	0.88	-0.4
5,846,366	-		PFLU_RS26150	0.88	+0.1
5,846,366	-		PFLU_RS26150	0.88	-0.2
5,846,366	-		PFLU_RS26150	0.88	-0.5
5,846,366	-		PFLU_RS26150	0.88	+0.7
5,846,366	-		PFLU_RS26150	0.88	-0.3
5,846,366	-		PFLU_RS26150	0.88	-0.2
5,846,470	+				-0.8
5,846,470	+				-0.1
5,846,659	+				+0.6
5,846,659	+				+0.5
5,846,659	+				+0.3
5,846,659	+				+1.4
5,846,659	+				+1.1
5,846,659	+				-0.2
5,846,659	+				+0.2
5,846,659	+				+0.5
5,846,659	+				+0.0
5,846,659	+				-0.3
5,846,659	+				-2.6
5,846,659	+				-0.1
5,846,659	+				+0.4
5,846,659	+				-0.3
5,846,659	+				-0.2
5,846,660	-				-1.0
5,846,660	-				+1.4
5,846,660	-				-0.3
5,846,660	-				-0.2
5,846,660	-				-0.1
5,846,660	-				-0.4
5,846,660	-				-0.1
5,846,660	-				+0.2
5,846,660	-				-0.5
5,846,660	-				-0.4
5,846,660	-				-0.1
5,846,784	+				-0.4
5,846,816	+				-0.1
5,846,842	+				+1.0
5,846,842	+				+0.1
5,846,843	-				-2.2
5,846,843	-				+0.2
5,846,843	-				-0.6
5,846,856	+				+0.3
5,846,857	-				+0.8
5,846,864	+				+0.1
5,846,904	+				-0.8
5,846,904	+				+0.2
5,846,904	+				-0.3
5,846,904	+				-0.4
5,846,905	-				+1.1
5,846,905	-				-0.4
5,846,905	-				+1.0
5,846,905	-				-0.7
5,846,905	-				-0.5
5,846,905	-				-0.4
5,846,917	+				+1.3
5,846,917	+				-1.2
5,846,917	+				+0.8
5,846,918	-				+1.8
5,846,918	-				+0.4
5,846,918	-				+0.5
5,846,918	-				+0.6
5,847,070	+		PFLU_RS26155	0.31	+0.8
5,847,070	+		PFLU_RS26155	0.31	+0.9
5,847,070	+		PFLU_RS26155	0.31	+0.4
5,847,070	+		PFLU_RS26155	0.31	-0.1
5,847,070	+		PFLU_RS26155	0.31	+0.6
5,847,070	+		PFLU_RS26155	0.31	+0.7
5,847,070	+		PFLU_RS26155	0.31	+1.0
5,847,070	+		PFLU_RS26155	0.31	-0.4
5,847,070	+		PFLU_RS26155	0.31	-1.1
5,847,071	-		PFLU_RS26155	0.31	+0.8
5,847,071	-		PFLU_RS26155	0.31	+0.4
5,847,071	-		PFLU_RS26155	0.31	-0.8
5,847,071	-		PFLU_RS26155	0.31	+0.5
5,847,140	+		PFLU_RS26155	0.45	+1.0
5,847,141	-		PFLU_RS26155	0.46	-0.2
5,847,230	+		PFLU_RS26155	0.64	-0.0
5,847,230	+		PFLU_RS26155	0.64	-0.3
5,847,230	+		PFLU_RS26155	0.64	-0.8
5,847,230	+		PFLU_RS26155	0.64	+1.3
5,847,230	+		PFLU_RS26155	0.64	+0.2
5,847,230	+		PFLU_RS26155	0.64	+0.6
5,847,230	+		PFLU_RS26155	0.64	-0.1
5,847,230	+		PFLU_RS26155	0.64	+0.5
5,847,231	-		PFLU_RS26155	0.64	+0.1
5,847,231	-		PFLU_RS26155	0.64	+0.5
5,847,231	-		PFLU_RS26155	0.64	+0.3
5,847,231	-		PFLU_RS26155	0.64	+0.5
5,847,231	-		PFLU_RS26155	0.64	+0.7
5,847,231	-		PFLU_RS26155	0.64	-0.2
5,847,231	-		PFLU_RS26155	0.64	+0.3
5,847,231	-		PFLU_RS26155	0.64	+0.4
5,847,231	-		PFLU_RS26155	0.64	+0.7
5,847,231	-		PFLU_RS26155	0.64	-0.6
5,847,231	-		PFLU_RS26155	0.64	+0.6
5,847,240	+		PFLU_RS26155	0.66	+0.2
5,847,389	+				-1.4
5,847,389	+				+0.9
5,847,389	+				-0.6
5,847,389	+				+0.6
5,847,390	-				+0.4
5,847,390	-				+0.1
5,847,390	-				-1.4
5,847,390	-				+0.2
5,847,390	-				+1.4
5,847,404	+				-0.3
5,847,405	-				+1.1
5,847,478	-				+0.3
5,847,487	+				+1.0
5,847,487	+				+0.2
5,847,487	+				+0.0
5,847,487	+				+0.1
5,847,487	+				+0.6
5,847,487	+				+0.6
5,847,487	+				+0.3
5,847,488	-				+0.2
5,847,488	-				+0.2
5,847,488	-				+0.2
5,847,488	-				+0.3
5,847,488	-				+1.0
5,847,488	-				+0.2
5,847,492	-				-0.1
5,847,492	-				-0.0
5,847,655	+				+0.5
5,847,655	+				+0.1
5,847,655	+				+0.7
5,847,655	+				-0.9
5,847,655	+				+1.0
5,847,655	+				+0.2
5,847,655	+				+0.7
5,847,655	+				+0.0
5,847,655	+				+0.1
5,847,655	+				-0.1
5,847,655	+				+0.6
5,847,655	+				+0.3
5,847,655	+				+0.8
5,847,656	-				-0.9
5,847,656	-				-0.7
5,847,656	-				+0.7
5,847,656	-				+0.8
5,847,656	-				+0.1
5,847,656	-				-1.1
5,847,656	-				+0.2
5,847,656	-				-1.2
5,848,003	+		PFLU_RS26160	0.27	-0.5
5,848,003	+		PFLU_RS26160	0.27	+0.8
5,848,024	+		PFLU_RS26160	0.28	+0.3
5,848,025	-		PFLU_RS26160	0.28	-0.5
5,848,055	-		PFLU_RS26160	0.30	+0.5
5,848,055	-		PFLU_RS26160	0.30	-1.1
5,848,109	-		PFLU_RS26160	0.33	+0.6
5,848,130	-		PFLU_RS26160	0.34	-0.6
5,848,240	+		PFLU_RS26160	0.40	+0.5
5,848,240	+		PFLU_RS26160	0.40	-0.5
5,848,240	+		PFLU_RS26160	0.40	-1.4
5,848,240	+		PFLU_RS26160	0.40	-0.3
5,848,241	-		PFLU_RS26160	0.40	+0.1
5,848,241	-		PFLU_RS26160	0.40	+0.3
5,848,268	-		PFLU_RS26160	0.41	+0.2