Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10695

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,356,453	+				+0.0
2,356,454	-				-1.2
2,356,487	+				+0.0
2,356,488	-				+0.6
2,356,488	-				+0.1
2,356,488	-				+0.1
2,356,488	-				+0.2
2,356,488	-				+1.0
2,356,539	+				-1.2
2,356,555	+				-1.0
2,356,556	-				+0.5
2,356,556	-				+0.6
2,356,608	+				-0.1
2,356,608	+				-0.6
2,356,609	-				+0.9
2,356,609	-				-0.4
2,356,609	-				-0.5
2,356,670	+				+1.0
2,356,671	-				+0.1
2,356,691	+				+0.1
2,356,691	+				+0.0
2,356,701	+				-0.1
2,356,706	+				+1.2
2,356,707	-				+0.2
2,356,728	+				+0.2
2,356,729	-				-0.7
2,356,729	-				+0.8
2,356,735	+				-0.8
2,356,736	-				+0.3
2,356,779	-				+0.3
2,356,796	+				-0.0
2,356,797	-				+0.7
2,356,797	-				+0.4
2,356,804	+				+0.2
2,356,804	+				+1.7
2,356,805	-				+1.6
2,356,805	-				+0.4
2,356,805	-				-0.1
2,356,805	-				+0.0
2,356,805	-				+1.0
2,356,807	+				+0.5
2,356,807	+				+0.1
2,356,807	+				-0.9
2,356,807	+				-0.2
2,356,807	+				+0.2
2,356,808	-				+0.5
2,356,808	-				+0.8
2,356,808	-				-0.1
2,356,818	+				+0.5
2,356,819	-				-1.2
2,356,819	-				-0.7
2,356,819	-				+0.0
2,356,821	-				-0.4
2,356,980	-				+0.5
2,357,051	+				+1.1
2,357,051	+				+0.5
2,357,051	+				+0.9
2,357,051	+				+1.0
2,357,051	+				-0.8
2,357,051	+				+0.2
2,357,052	-				-0.2
2,357,052	-				-0.4
2,357,052	-				+0.5
2,357,052	-				+0.6
2,357,052	-				+0.7
2,357,052	-				+0.4
2,357,064	+				-0.5
2,357,098	+				+0.1
2,357,098	+				-0.3
2,357,099	-				+0.4
2,357,115	-				+0.0
2,357,115	-				-0.2
2,357,115	-				-0.3
2,357,148	+				+0.3
2,357,154	+				+0.3
2,357,183	-				-0.6
2,357,183	-				-0.2
2,357,184	+				-0.7
2,357,184	+				+0.0
2,357,184	+				+0.2
2,357,192	+				+0.8
2,357,192	+				+0.1
2,357,263	+		PFLU_RS30645	0.32	+0.4
2,357,263	+		PFLU_RS30645	0.32	+0.9
2,357,264	-		PFLU_RS30645	0.32	+0.0
2,357,264	-		PFLU_RS30645	0.32	+0.4
2,357,384	+				-0.3
2,357,384	+				-0.5
2,357,384	+				-0.2
2,357,385	-				+0.3
2,357,385	-				+0.7
2,357,385	-				+0.2
2,357,385	-				+0.3
2,357,431	-				+0.1
2,357,431	-				+0.6
2,357,485	+		PFLU_RS10695	0.10	+0.0
2,357,642	+		PFLU_RS10695	0.50	+0.7
2,357,642	+		PFLU_RS10695	0.50	+0.5
2,357,642	+		PFLU_RS10695	0.50	+0.6
2,357,642	+		PFLU_RS10695	0.50	+0.1
2,357,643	-		PFLU_RS10695	0.50	-0.3
2,357,643	-		PFLU_RS10695	0.50	+1.4
2,357,643	-		PFLU_RS10695	0.50	+0.9
2,357,643	-		PFLU_RS10695	0.50	+0.1
2,357,643	-		PFLU_RS10695	0.50	+0.3
2,357,643	-		PFLU_RS10695	0.50	+0.6
2,357,643	-		PFLU_RS10695	0.50	-0.0
2,357,757	+		PFLU_RS10695	0.78	+0.2
2,357,757	+		PFLU_RS10695	0.78	+0.3
2,357,757	+		PFLU_RS10695	0.78	-0.0
2,357,758	-		PFLU_RS10695	0.78	-1.4
2,357,758	-		PFLU_RS10695	0.78	+0.2
2,357,758	-		PFLU_RS10695	0.78	+1.2
2,357,788	+		PFLU_RS10695	0.86	-1.1
2,357,863	+				+0.7
2,357,863	+				+0.5
2,357,863	+				-0.2
2,357,863	+				-0.2
2,357,863	+				+0.9
2,357,863	+				+1.0
2,357,863	+				-0.1
2,357,863	+				+0.2
2,357,863	+				+1.2
2,357,863	+				+0.8
2,357,863	+				+0.8
2,357,863	+				+0.4
2,357,863	+				-0.4
2,357,863	+				+1.4
2,357,863	+				-0.2
2,357,863	+				-1.7
2,357,863	+				-0.6
2,357,863	+				-0.3
2,357,863	+				+0.5
2,357,863	+				+0.2
2,357,863	+				-0.3
2,357,863	+				-0.8
2,357,863	+				+0.5
2,357,864	-				+0.3
2,357,864	-				-0.4
2,357,864	-				-0.1
2,357,864	-				+0.2
2,357,864	-				-0.2
2,357,864	-				-1.1
2,357,864	-				+0.8
2,357,864	-				+0.6
2,357,864	-				+1.2
2,357,864	-				-0.0
2,357,864	-				+1.0
2,357,864	-				-0.3
2,357,864	-				-0.1
2,357,864	-				+1.4
2,357,867	+				+0.6
2,357,867	+				+0.3
2,357,867	+				+0.4
2,357,868	-				+0.7
2,357,868	-				-0.0
2,357,868	-				+0.5
2,357,968	+		PFLU_RS10700	0.24	+0.2
2,357,969	-		PFLU_RS10700	0.25	-0.4
2,358,162	+		PFLU_RS10700	0.81	+0.2
2,358,162	+		PFLU_RS10700	0.81	-0.6
2,358,162	+		PFLU_RS10700	0.81	+0.0
2,358,162	+		PFLU_RS10700	0.81	-0.3
2,358,162	+		PFLU_RS10700	0.81	+0.6
2,358,162	+		PFLU_RS10700	0.81	+0.7
2,358,162	+		PFLU_RS10700	0.81	+0.0
2,358,162	+		PFLU_RS10700	0.81	-1.2
2,358,163	-		PFLU_RS10700	0.81	-0.0
2,358,163	-		PFLU_RS10700	0.81	-0.0
2,358,163	-		PFLU_RS10700	0.81	-1.3
2,358,163	-		PFLU_RS10700	0.81	+0.3
2,358,163	-		PFLU_RS10700	0.81	-2.4
2,358,163	-		PFLU_RS10700	0.81	-1.3
2,358,163	-		PFLU_RS10700	0.81	+0.8
2,358,241	-				-0.7
2,358,355	+		PFLU_RS10705	0.19	+0.4
2,358,451	+		PFLU_RS10705	0.35	-0.6
2,358,451	+		PFLU_RS10705	0.35	+0.1
2,358,451	+		PFLU_RS10705	0.35	-0.3
2,358,451	+		PFLU_RS10705	0.35	+0.3
2,358,451	+		PFLU_RS10705	0.35	-1.2
2,358,451	+		PFLU_RS10705	0.35	+0.6
2,358,451	+		PFLU_RS10705	0.35	-1.4
2,358,452	-		PFLU_RS10705	0.35	-1.1
2,358,452	-		PFLU_RS10705	0.35	+0.0
2,358,452	-		PFLU_RS10705	0.35	+1.4
2,358,452	-		PFLU_RS10705	0.35	+1.1
2,358,452	-		PFLU_RS10705	0.35	+0.2
2,358,700	+		PFLU_RS10705	0.76	+1.5
2,358,701	-		PFLU_RS10705	0.76	+1.5
2,358,701	-		PFLU_RS10705	0.76	+0.3
2,358,799	+				+1.0
2,358,799	+				+0.1
2,358,799	+				+0.1
2,358,799	+				+0.4
2,358,800	-				+1.0