Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07985

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,779,368	+				+0.4
1,779,368	+				+0.5
1,779,369	-				+0.9
1,779,369	-				-0.5
1,779,404	+				-0.3
1,779,405	-				+0.7
1,779,405	-				+0.6
1,779,405	-				+0.6
1,779,543	+				-1.5
1,779,602	-		PFLU_RS07985	0.13	+0.4
1,779,655	-		PFLU_RS07985	0.18	+0.2
1,779,655	-		PFLU_RS07985	0.18	+0.3
1,779,674	+		PFLU_RS07985	0.19	-0.3
1,779,674	+		PFLU_RS07985	0.19	+0.4
1,779,674	+		PFLU_RS07985	0.19	+0.7
1,779,675	-		PFLU_RS07985	0.19	+0.7
1,779,675	-		PFLU_RS07985	0.19	+1.1
1,779,678	+		PFLU_RS07985	0.19	+0.6
1,779,678	+		PFLU_RS07985	0.19	-0.1
1,779,678	+		PFLU_RS07985	0.19	-0.5
1,779,678	+		PFLU_RS07985	0.19	+0.5
1,779,678	+		PFLU_RS07985	0.19	-0.5
1,779,678	+		PFLU_RS07985	0.19	+0.5
1,779,678	+		PFLU_RS07985	0.19	+0.3
1,779,679	-		PFLU_RS07985	0.19	-0.3
1,779,679	-		PFLU_RS07985	0.19	-0.6
1,779,679	-		PFLU_RS07985	0.19	-0.6
1,779,679	-		PFLU_RS07985	0.19	+1.8
1,779,679	-		PFLU_RS07985	0.19	+0.3
1,779,679	-		PFLU_RS07985	0.19	-0.1
1,779,679	-		PFLU_RS07985	0.19	+0.8
1,779,679	-		PFLU_RS07985	0.19	-0.2
1,779,679	-		PFLU_RS07985	0.19	+0.0
1,779,704	+		PFLU_RS07985	0.21	+0.0
1,779,704	+		PFLU_RS07985	0.21	-0.1
1,779,705	-		PFLU_RS07985	0.22	+1.8
1,779,767	+		PFLU_RS07985	0.27	-0.4
1,779,768	-		PFLU_RS07985	0.27	+0.5
1,779,811	-		PFLU_RS07985	0.30	+0.6
1,779,831	+		PFLU_RS07985	0.32	+0.3
1,779,831	+		PFLU_RS07985	0.32	+0.5
1,779,831	+		PFLU_RS07985	0.32	+0.6
1,779,832	-		PFLU_RS07985	0.32	-0.7
1,779,832	-		PFLU_RS07985	0.32	+0.6
1,779,842	+		PFLU_RS07985	0.33	-0.0
1,779,891	+		PFLU_RS07985	0.37	+0.2
1,779,892	-		PFLU_RS07985	0.37	+0.4
1,779,892	-		PFLU_RS07985	0.37	-0.5
1,779,935	+		PFLU_RS07985	0.40	-0.4
1,779,996	+		PFLU_RS07985	0.45	-1.7
1,779,996	+		PFLU_RS07985	0.45	+0.8
1,779,996	+		PFLU_RS07985	0.45	-0.4
1,779,996	+		PFLU_RS07985	0.45	-0.0
1,779,996	+		PFLU_RS07985	0.45	-0.7
1,779,997	-		PFLU_RS07985	0.45	+0.6
1,780,006	+		PFLU_RS07985	0.46	-0.5
1,780,006	+		PFLU_RS07985	0.46	-1.6
1,780,007	-		PFLU_RS07985	0.46	-0.9
1,780,022	+		PFLU_RS07985	0.47	-0.7
1,780,023	-		PFLU_RS07985	0.47	+0.8
1,780,023	-		PFLU_RS07985	0.47	-0.6
1,780,023	-		PFLU_RS07985	0.47	+0.6
1,780,071	+		PFLU_RS07985	0.51	-0.1
1,780,071	+		PFLU_RS07985	0.51	+0.9
1,780,071	+		PFLU_RS07985	0.51	+0.6
1,780,071	+		PFLU_RS07985	0.51	-1.1
1,780,072	-		PFLU_RS07985	0.51	+0.8
1,780,072	-		PFLU_RS07985	0.51	+0.5
1,780,072	-		PFLU_RS07985	0.51	-0.2
1,780,072	-		PFLU_RS07985	0.51	+0.1
1,780,072	-		PFLU_RS07985	0.51	+0.9
1,780,072	-		PFLU_RS07985	0.51	-1.7
1,780,072	-		PFLU_RS07985	0.51	+0.8
1,780,072	-		PFLU_RS07985	0.51	-0.4
1,780,082	+		PFLU_RS07985	0.52	-0.1
1,780,082	+		PFLU_RS07985	0.52	-0.1
1,780,082	+		PFLU_RS07985	0.52	-0.2
1,780,083	-		PFLU_RS07985	0.52	+1.8
1,780,083	-		PFLU_RS07985	0.52	-0.9
1,780,083	-		PFLU_RS07985	0.52	+0.2
1,780,083	-		PFLU_RS07985	0.52	-0.7
1,780,083	-		PFLU_RS07985	0.52	-0.3
1,780,099	+		PFLU_RS07985	0.53	+0.6
1,780,099	+		PFLU_RS07985	0.53	-0.6
1,780,100	-		PFLU_RS07985	0.53	+0.2
1,780,282	+		PFLU_RS07985	0.68	+0.2
1,780,283	-		PFLU_RS07985	0.68	-0.1
1,780,351	+		PFLU_RS07985	0.74	-0.1
1,780,400	-		PFLU_RS07985	0.78	-0.5
1,780,400	-		PFLU_RS07985	0.78	+0.5
1,780,400	-		PFLU_RS07985	0.78	-0.1
1,780,400	-		PFLU_RS07985	0.78	+0.3
1,780,454	+		PFLU_RS07985	0.82	+0.5
1,780,463	+		PFLU_RS07985	0.83	+0.6
1,780,463	+		PFLU_RS07985	0.83	+0.7
1,780,527	-		PFLU_RS07985	0.88	+1.1
1,780,527	-		PFLU_RS07985	0.88	+1.6
1,780,527	-		PFLU_RS07985	0.88	-0.2
1,780,623	-				+0.4
1,780,623	-				-0.3
1,780,654	+				+0.7
1,780,654	+				+0.2
1,780,667	+				+1.0
1,780,667	+				+0.1
1,780,667	+				-1.5
1,780,667	+				+0.4
1,780,667	+				-0.5
1,780,701	+				+0.3
1,780,702	-				-0.3
1,780,763	-				-0.1
1,780,763	-				-0.9
1,780,795	+				+0.3
1,780,795	+				-0.0
1,780,795	+				+0.8
1,780,795	+				+0.9
1,780,795	+				-0.4
1,780,796	-				+0.9
1,780,796	-				+0.2
1,780,796	-				-1.2
1,780,796	-				+0.1
1,780,796	-				-0.7
1,780,796	-				+0.1
1,780,796	-				-0.0
1,780,796	-				-1.1
1,780,796	-				+1.0
1,780,796	-				-0.6
1,780,796	-				+0.1
1,780,807	+				+0.5
1,780,807	+				+0.4
1,780,807	+				+0.5
1,780,807	+				+0.0
1,780,807	+				-1.4
1,780,807	+				+0.3
1,780,808	-				+0.6
1,780,808	-				+0.8
1,780,808	-				+0.5
1,780,808	-				+0.7
1,780,808	-				+0.3
1,780,808	-				-0.6
1,780,808	-				-0.0
1,780,808	-				+0.2
1,780,859	+				-0.9
1,780,859	+				-0.4
1,780,859	+				+0.5
1,780,860	-				+0.0
1,780,860	-				+0.6
1,780,860	-				+0.8
1,780,887	+				-0.0
1,780,888	-				-0.5
1,780,888	-				+0.9
1,780,901	+				-0.2
1,780,902	-				+0.2
1,780,934	+				+0.4
1,780,934	+				+0.3
1,780,934	+				-0.6
1,780,934	+				-1.0
1,780,934	+				-0.2
1,780,935	-				+0.7
1,780,956	-				+0.4
1,780,996	+				-0.3
1,780,996	+				+0.1
1,780,997	-				-0.1
1,780,997	-				+0.0
1,781,027	+				-1.1
1,781,058	+		PFLU_RS07990	0.11	-1.4
1,781,058	+		PFLU_RS07990	0.11	+0.0
1,781,058	+		PFLU_RS07990	0.11	+0.1
1,781,059	-		PFLU_RS07990	0.12	-1.4
1,781,059	-		PFLU_RS07990	0.12	-0.8
1,781,060	+		PFLU_RS07990	0.12	+0.9
1,781,060	+		PFLU_RS07990	0.12	-0.2
1,781,060	+		PFLU_RS07990	0.12	+0.4
1,781,060	+		PFLU_RS07990	0.12	+0.3
1,781,060	+		PFLU_RS07990	0.12	-0.3
1,781,060	+		PFLU_RS07990	0.12	-0.4
1,781,060	+		PFLU_RS07990	0.12	+0.3
1,781,060	+		PFLU_RS07990	0.12	-0.7
1,781,060	+		PFLU_RS07990	0.12	-0.5
1,781,060	+		PFLU_RS07990	0.12	+1.0
1,781,060	+		PFLU_RS07990	0.12	+0.5
1,781,060	+		PFLU_RS07990	0.12	+1.0
1,781,060	+		PFLU_RS07990	0.12	-0.3
1,781,060	+		PFLU_RS07990	0.12	-0.9
1,781,061	-		PFLU_RS07990	0.12	+0.2
1,781,061	-		PFLU_RS07990	0.12	+0.1
1,781,061	-		PFLU_RS07990	0.12	+0.6
1,781,061	-		PFLU_RS07990	0.12	+1.0
1,781,061	-		PFLU_RS07990	0.12	-0.7
1,781,061	-		PFLU_RS07990	0.12	-0.4
1,781,061	-		PFLU_RS07990	0.12	-1.7
1,781,061	-		PFLU_RS07990	0.12	-0.1
1,781,061	-		PFLU_RS07990	0.12	-0.3
1,781,061	-		PFLU_RS07990	0.12	-0.2
1,781,061	-		PFLU_RS07990	0.12	-0.3
1,781,061	-		PFLU_RS07990	0.12	+1.4
1,781,061	-		PFLU_RS07990	0.12	+0.1
1,781,061	-		PFLU_RS07990	0.12	-0.5
1,781,061	-		PFLU_RS07990	0.12	+1.2
1,781,061	-		PFLU_RS07990	0.12	-0.1
1,781,345	+		PFLU_RS07990	0.43	+0.5
1,781,375	+		PFLU_RS07990	0.46	+0.5
1,781,375	+		PFLU_RS07990	0.46	-0.6
1,781,375	+		PFLU_RS07990	0.46	+0.6
1,781,376	-		PFLU_RS07990	0.47	-1.5
1,781,376	-		PFLU_RS07990	0.47	-0.5
1,781,376	-		PFLU_RS07990	0.47	-0.7
1,781,376	-		PFLU_RS07990	0.47	+0.5
1,781,376	-		PFLU_RS07990	0.47	-0.1
1,781,376	-		PFLU_RS07990	0.47	+0.1
1,781,376	-		PFLU_RS07990	0.47	+0.3
1,781,472	+		PFLU_RS07990	0.57	+0.1
1,781,472	+		PFLU_RS07990	0.57	+0.5
1,781,472	+		PFLU_RS07990	0.57	+0.8
1,781,473	-		PFLU_RS07990	0.57	+0.6
1,781,473	-		PFLU_RS07990	0.57	+0.1
1,781,473	-		PFLU_RS07990	0.57	+0.3
1,781,473	-		PFLU_RS07990	0.57	+0.1
1,781,473	-		PFLU_RS07990	0.57	+0.0
1,781,473	-		PFLU_RS07990	0.57	+0.2
1,781,476	+		PFLU_RS07990	0.58	-0.5
1,781,476	+		PFLU_RS07990	0.58	+0.6
1,781,476	+		PFLU_RS07990	0.58	-0.9
1,781,476	+		PFLU_RS07990	0.58	+0.2
1,781,476	+		PFLU_RS07990	0.58	+0.1
1,781,476	+		PFLU_RS07990	0.58	-0.2
1,781,476	+		PFLU_RS07990	0.58	-0.2
1,781,476	+		PFLU_RS07990	0.58	-1.1
1,781,476	+		PFLU_RS07990	0.58	-2.0
1,781,476	+		PFLU_RS07990	0.58	-0.8
1,781,477	-		PFLU_RS07990	0.58	+0.1
1,781,477	-		PFLU_RS07990	0.58	-0.4
1,781,477	-		PFLU_RS07990	0.58	-0.1
1,781,477	-		PFLU_RS07990	0.58	-0.2
1,781,477	-		PFLU_RS07990	0.58	+0.0
1,781,486	+		PFLU_RS07990	0.59	+0.6
1,781,486	+		PFLU_RS07990	0.59	+0.1
1,781,486	+		PFLU_RS07990	0.59	-0.0
1,781,486	+		PFLU_RS07990	0.59	-1.5
1,781,486	+		PFLU_RS07990	0.59	+0.6
1,781,486	+		PFLU_RS07990	0.59	-0.3
1,781,487	-		PFLU_RS07990	0.59	-1.7
1,781,487	-		PFLU_RS07990	0.59	+1.3
1,781,487	-		PFLU_RS07990	0.59	+0.9
1,781,487	-		PFLU_RS07990	0.59	-1.0
1,781,487	-		PFLU_RS07990	0.59	-0.2
1,781,487	-		PFLU_RS07990	0.59	+0.5
1,781,487	-		PFLU_RS07990	0.59	+0.8
1,781,487	-		PFLU_RS07990	0.59	+0.2
1,781,487	-		PFLU_RS07990	0.59	+0.3
1,781,487	-		PFLU_RS07990	0.59	+0.8
1,781,487	-		PFLU_RS07990	0.59	-0.7
1,781,487	-		PFLU_RS07990	0.59	+0.3
1,781,535	+		PFLU_RS07990	0.64	+0.6
1,781,535	+		PFLU_RS07990	0.64	-0.7
1,781,536	-		PFLU_RS07990	0.64	+0.0
1,781,536	-		PFLU_RS07990	0.64	-0.5
1,781,536	-		PFLU_RS07990	0.64	-0.1
1,781,536	-		PFLU_RS07990	0.64	+0.1
1,781,536	-		PFLU_RS07990	0.64	-0.3
1,781,663	+		PFLU_RS07990	0.78	+0.7
1,781,663	+		PFLU_RS07990	0.78	+0.3
1,781,664	-		PFLU_RS07990	0.78	-0.4
1,781,666	+		PFLU_RS07990	0.79	+1.3
1,781,666	+		PFLU_RS07990	0.79	+0.3
1,781,667	-		PFLU_RS07990	0.79	+0.8
1,781,667	-		PFLU_RS07990	0.79	-0.7
1,781,667	-		PFLU_RS07990	0.79	+0.1