Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07120

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,584,951	+		PFLU_RS07115	0.69	-1.4
1,584,951	+		PFLU_RS07115	0.69	-1.2
1,584,951	+		PFLU_RS07115	0.69	-1.1
1,584,951	+		PFLU_RS07115	0.69	-0.1
1,584,952	-		PFLU_RS07115	0.69	+0.2
1,584,952	-		PFLU_RS07115	0.69	+0.5
1,584,952	-		PFLU_RS07115	0.69	+0.2
1,584,952	-		PFLU_RS07115	0.69	-0.2
1,584,958	+		PFLU_RS07115	0.69	+0.2
1,584,958	+		PFLU_RS07115	0.69	+0.0
1,584,958	+		PFLU_RS07115	0.69	-0.4
1,584,958	+		PFLU_RS07115	0.69	-0.4
1,584,958	+		PFLU_RS07115	0.69	-0.3
1,584,958	+		PFLU_RS07115	0.69	+0.3
1,584,958	+		PFLU_RS07115	0.69	+0.5
1,584,958	+		PFLU_RS07115	0.69	+0.8
1,584,958	+		PFLU_RS07115	0.69	+1.8
1,584,959	-		PFLU_RS07115	0.69	-0.2
1,584,959	-		PFLU_RS07115	0.69	+1.9
1,584,959	-		PFLU_RS07115	0.69	-0.1
1,584,959	-		PFLU_RS07115	0.69	+1.3
1,584,959	-		PFLU_RS07115	0.69	-0.7
1,584,959	-		PFLU_RS07115	0.69	-0.4
1,584,959	-		PFLU_RS07115	0.69	-2.5
1,584,959	-		PFLU_RS07115	0.69	-0.1
1,584,959	-		PFLU_RS07115	0.69	+0.7
1,584,959	-		PFLU_RS07115	0.69	-0.0
1,584,959	-		PFLU_RS07115	0.69	-0.2
1,584,959	-		PFLU_RS07115	0.69	+0.6
1,584,959	-		PFLU_RS07115	0.69	-1.1
1,585,041	+		PFLU_RS07115	0.73	+0.6
1,585,041	+		PFLU_RS07115	0.73	+0.2
1,585,041	+		PFLU_RS07115	0.73	+0.4
1,585,041	+		PFLU_RS07115	0.73	-0.2
1,585,041	+		PFLU_RS07115	0.73	+0.5
1,585,041	+		PFLU_RS07115	0.73	-0.5
1,585,042	-		PFLU_RS07115	0.74	-0.6
1,585,042	-		PFLU_RS07115	0.74	-0.2
1,585,042	-		PFLU_RS07115	0.74	+0.7
1,585,042	-		PFLU_RS07115	0.74	+0.2
1,585,042	-		PFLU_RS07115	0.74	+0.7
1,585,044	+		PFLU_RS07115	0.74	-0.1
1,585,044	+		PFLU_RS07115	0.74	-1.1
1,585,044	+		PFLU_RS07115	0.74	+0.0
1,585,045	-		PFLU_RS07115	0.74	-0.8
1,585,045	-		PFLU_RS07115	0.74	+0.5
1,585,045	-		PFLU_RS07115	0.74	-0.5
1,585,063	+		PFLU_RS07115	0.75	+0.7
1,585,063	+		PFLU_RS07115	0.75	+0.6
1,585,064	-		PFLU_RS07115	0.75	+0.7
1,585,064	-		PFLU_RS07115	0.75	+0.1
1,585,064	-		PFLU_RS07115	0.75	+0.1
1,585,064	-		PFLU_RS07115	0.75	+0.5
1,585,093	+		PFLU_RS07115	0.76	+0.4
1,585,138	+		PFLU_RS07115	0.78	-0.3
1,585,138	+		PFLU_RS07115	0.78	+0.3
1,585,138	+		PFLU_RS07115	0.78	-0.4
1,585,191	+		PFLU_RS07115	0.81	-0.5
1,585,191	+		PFLU_RS07115	0.81	+0.3
1,585,192	-		PFLU_RS07115	0.81	+0.4
1,585,192	-		PFLU_RS07115	0.81	+0.4
1,585,213	+		PFLU_RS07115	0.82	-0.4
1,585,213	+		PFLU_RS07115	0.82	+0.1
1,585,213	+		PFLU_RS07115	0.82	+0.1
1,585,214	-		PFLU_RS07115	0.82	+0.1
1,585,214	-		PFLU_RS07115	0.82	-0.1
1,585,214	-		PFLU_RS07115	0.82	-0.5
1,585,214	-		PFLU_RS07115	0.82	-0.4
1,585,214	-		PFLU_RS07115	0.82	+0.4
1,585,248	+		PFLU_RS07115	0.84	-0.8
1,585,249	-		PFLU_RS07115	0.84	+1.3
1,585,258	+		PFLU_RS07115	0.85	+0.7
1,585,258	+		PFLU_RS07115	0.85	+1.3
1,585,258	+		PFLU_RS07115	0.85	+0.2
1,585,258	+		PFLU_RS07115	0.85	+1.0
1,585,259	-		PFLU_RS07115	0.85	+0.2
1,585,259	-		PFLU_RS07115	0.85	+0.4
1,585,259	-		PFLU_RS07115	0.85	+0.3
1,585,259	-		PFLU_RS07115	0.85	+0.2
1,585,259	-		PFLU_RS07115	0.85	-1.1
1,585,493	+				+0.1
1,585,494	-				-0.1
1,585,497	+				+0.2
1,585,497	+				+1.5
1,585,497	+				+0.1
1,585,497	+				+0.4
1,585,497	+				-0.3
1,585,497	+				+0.6
1,585,498	-				+0.3
1,585,498	-				-0.1
1,585,498	-				-1.3
1,585,498	-				+0.9
1,585,718	-				+1.2
1,585,742	-				+0.6
1,585,804	-				-0.1
1,585,881	-				-1.6
1,585,940	+				+0.3
1,585,941	-				+0.8
1,585,943	+				+0.2
1,585,943	+				+1.0
1,585,944	-				+0.7
1,586,009	+				-0.3
1,586,010	-				-0.2
1,586,033	+				-1.1
1,586,033	+				+0.1
1,586,033	+				+0.2
1,586,084	+		PFLU_RS07120	0.10	-0.0
1,586,085	-		PFLU_RS07120	0.10	-0.4
1,586,123	+		PFLU_RS07120	0.12	-0.2
1,586,124	-		PFLU_RS07120	0.12	+0.2
1,586,124	-		PFLU_RS07120	0.12	+0.5
1,586,136	-		PFLU_RS07120	0.13	-1.5
1,586,208	-		PFLU_RS07120	0.16	-0.4
1,586,208	-		PFLU_RS07120	0.16	-1.4
1,586,208	-		PFLU_RS07120	0.16	-1.3
1,586,208	-		PFLU_RS07120	0.16	-0.0
1,586,209	+		PFLU_RS07120	0.17	+0.5
1,586,209	+		PFLU_RS07120	0.17	-1.4
1,586,219	+		PFLU_RS07120	0.17	-0.5
1,586,220	-		PFLU_RS07120	0.17	+0.8
1,586,254	+		PFLU_RS07120	0.19	+0.9
1,586,255	-		PFLU_RS07120	0.19	-0.2
1,586,258	+		PFLU_RS07120	0.19	+0.5
1,586,305	-		PFLU_RS07120	0.21	+0.9
1,586,305	-		PFLU_RS07120	0.21	-0.1
1,586,348	+		PFLU_RS07120	0.23	+0.3
1,586,349	-		PFLU_RS07120	0.23	+0.1
1,586,366	+		PFLU_RS07120	0.24	+0.2
1,586,369	+		PFLU_RS07120	0.24	+1.0
1,586,370	-		PFLU_RS07120	0.25	-0.0
1,586,425	+		PFLU_RS07120	0.27	+0.2
1,586,426	-		PFLU_RS07120	0.27	+0.3
1,586,426	-		PFLU_RS07120	0.27	-0.8
1,586,426	-		PFLU_RS07120	0.27	+0.2
1,586,426	-		PFLU_RS07120	0.27	-0.4
1,586,426	-		PFLU_RS07120	0.27	-0.0
1,586,478	-		PFLU_RS07120	0.30	-0.3
1,586,480	+		PFLU_RS07120	0.30	+0.1
1,586,586	-		PFLU_RS07120	0.35	+0.4
1,586,645	-		PFLU_RS07120	0.38	-1.3
1,586,673	+		PFLU_RS07120	0.40	+0.5
1,586,820	-		PFLU_RS07120	0.47	+0.4
1,586,820	-		PFLU_RS07120	0.47	-0.3
1,586,820	-		PFLU_RS07120	0.47	-0.1
1,586,838	+		PFLU_RS07120	0.48	+0.4
1,586,838	+		PFLU_RS07120	0.48	-0.2
1,586,838	+		PFLU_RS07120	0.48	-0.4
1,586,838	+		PFLU_RS07120	0.48	+0.2
1,586,839	-		PFLU_RS07120	0.48	-0.0
1,586,839	-		PFLU_RS07120	0.48	+0.5
1,586,839	-		PFLU_RS07120	0.48	-0.0
1,586,840	+		PFLU_RS07120	0.48	-1.3
1,586,840	+		PFLU_RS07120	0.48	+0.3
1,586,840	+		PFLU_RS07120	0.48	+0.1
1,586,840	+		PFLU_RS07120	0.48	+0.7
1,586,841	-		PFLU_RS07120	0.48	+0.1
1,586,841	-		PFLU_RS07120	0.48	-0.1
1,586,841	-		PFLU_RS07120	0.48	+0.0
1,586,984	+		PFLU_RS07120	0.55	+0.3
1,586,995	+		PFLU_RS07120	0.55	-0.1
1,586,995	+		PFLU_RS07120	0.55	+0.7
1,586,995	+		PFLU_RS07120	0.55	+0.2
1,586,995	+		PFLU_RS07120	0.55	-0.0
1,586,995	+		PFLU_RS07120	0.55	+0.3
1,586,995	+		PFLU_RS07120	0.55	-0.5
1,586,995	+		PFLU_RS07120	0.55	+0.8
1,586,995	+		PFLU_RS07120	0.55	+0.2
1,586,995	+		PFLU_RS07120	0.55	+0.1
1,586,995	+		PFLU_RS07120	0.55	-0.3
1,586,995	+		PFLU_RS07120	0.55	+0.1
1,586,995	+		PFLU_RS07120	0.55	+0.4
1,586,995	+		PFLU_RS07120	0.55	+0.5
1,586,995	+		PFLU_RS07120	0.55	-0.5
1,586,995	+		PFLU_RS07120	0.55	-0.7
1,586,995	+		PFLU_RS07120	0.55	+0.0
1,586,995	+		PFLU_RS07120	0.55	+0.4
1,586,995	+		PFLU_RS07120	0.55	-0.7
1,586,996	-		PFLU_RS07120	0.56	+0.1
1,586,996	-		PFLU_RS07120	0.56	+0.8
1,586,996	-		PFLU_RS07120	0.56	+2.4
1,586,996	-		PFLU_RS07120	0.56	+0.3
1,586,996	-		PFLU_RS07120	0.56	-0.1
1,586,996	-		PFLU_RS07120	0.56	+0.7
1,586,996	-		PFLU_RS07120	0.56	+1.7
1,586,996	-		PFLU_RS07120	0.56	-0.1
1,586,996	-		PFLU_RS07120	0.56	+0.7
1,586,996	-		PFLU_RS07120	0.56	-0.6
1,586,996	-		PFLU_RS07120	0.56	-0.6
1,586,996	-		PFLU_RS07120	0.56	-0.1
1,586,996	-		PFLU_RS07120	0.56	+0.9
1,586,996	-		PFLU_RS07120	0.56	+1.1
1,586,996	-		PFLU_RS07120	0.56	+0.3
1,586,996	-		PFLU_RS07120	0.56	+0.4
1,586,996	-		PFLU_RS07120	0.56	+0.2
1,587,044	+		PFLU_RS07120	0.58	+0.9
1,587,044	+		PFLU_RS07120	0.58	-0.5
1,587,044	+		PFLU_RS07120	0.58	+0.0
1,587,044	+		PFLU_RS07120	0.58	+1.7
1,587,045	-		PFLU_RS07120	0.58	+0.5
1,587,112	-		PFLU_RS07120	0.61	+0.6
1,587,112	-		PFLU_RS07120	0.61	+0.4
1,587,112	-		PFLU_RS07120	0.61	+0.3
1,587,125	+		PFLU_RS07120	0.62	+0.4
1,587,126	-		PFLU_RS07120	0.62	+0.1
1,587,131	-		PFLU_RS07120	0.62	+0.6
1,587,204	+		PFLU_RS07120	0.66	+0.5
1,587,204	+		PFLU_RS07120	0.66	-0.6
1,587,204	+		PFLU_RS07120	0.66	+0.9
1,587,204	+		PFLU_RS07120	0.66	+0.5
1,587,204	+		PFLU_RS07120	0.66	-1.5
1,587,204	+		PFLU_RS07120	0.66	-1.7
1,587,204	+		PFLU_RS07120	0.66	+1.1
1,587,204	+		PFLU_RS07120	0.66	-1.4
1,587,204	+		PFLU_RS07120	0.66	-0.1
1,587,204	+		PFLU_RS07120	0.66	+0.3
1,587,204	+		PFLU_RS07120	0.66	+0.3
1,587,204	+		PFLU_RS07120	0.66	-0.1
1,587,204	+		PFLU_RS07120	0.66	+0.3
1,587,204	+		PFLU_RS07120	0.66	+0.7
1,587,204	+		PFLU_RS07120	0.66	-0.0
1,587,204	+		PFLU_RS07120	0.66	-0.2
1,587,204	+		PFLU_RS07120	0.66	-0.2
1,587,204	+		PFLU_RS07120	0.66	+0.7
1,587,204	+		PFLU_RS07120	0.66	-0.2
1,587,204	+		PFLU_RS07120	0.66	-1.0
1,587,205	-		PFLU_RS07120	0.66	-0.3
1,587,205	-		PFLU_RS07120	0.66	-1.8
1,587,205	-		PFLU_RS07120	0.66	-0.0
1,587,205	-		PFLU_RS07120	0.66	+0.0
1,587,205	-		PFLU_RS07120	0.66	+0.5
1,587,205	-		PFLU_RS07120	0.66	+0.4
1,587,205	-		PFLU_RS07120	0.66	+0.3
1,587,205	-		PFLU_RS07120	0.66	+1.1
1,587,205	-		PFLU_RS07120	0.66	-0.4
1,587,205	-		PFLU_RS07120	0.66	-0.1
1,587,205	-		PFLU_RS07120	0.66	-1.2
1,587,205	-		PFLU_RS07120	0.66	+0.3
1,587,205	-		PFLU_RS07120	0.66	-0.4
1,587,205	-		PFLU_RS07120	0.66	+0.5
1,587,205	-		PFLU_RS07120	0.66	+0.4
1,587,206	+		PFLU_RS07120	0.66	-0.0
1,587,240	+		PFLU_RS07120	0.68	+0.2
1,587,240	+		PFLU_RS07120	0.68	-1.4
1,587,241	-		PFLU_RS07120	0.68	+0.5
1,587,241	-		PFLU_RS07120	0.68	+0.1
1,587,241	-		PFLU_RS07120	0.68	+0.5
1,587,241	-		PFLU_RS07120	0.68	+0.7
1,587,278	+		PFLU_RS07120	0.69	+0.0
1,587,278	+		PFLU_RS07120	0.69	+0.4
1,587,279	-		PFLU_RS07120	0.70	+0.2
1,587,323	+		PFLU_RS07120	0.72	-0.8
1,587,323	+		PFLU_RS07120	0.72	+0.2
1,587,323	+		PFLU_RS07120	0.72	+0.4
1,587,323	+		PFLU_RS07120	0.72	-1.2
1,587,379	-		PFLU_RS07120	0.74	-0.5
1,587,425	+		PFLU_RS07120	0.77	+0.4
1,587,615	+		PFLU_RS07120	0.86	+0.2
1,587,616	-		PFLU_RS07120	0.86	-0.7
1,587,643	+		PFLU_RS07120	0.88	-0.3
1,587,643	+		PFLU_RS07120	0.88	+0.1
1,587,643	+		PFLU_RS07120	0.88	+0.1
1,587,643	+		PFLU_RS07120	0.88	+0.3
1,587,643	+		PFLU_RS07120	0.88	-0.4
1,587,643	+		PFLU_RS07120	0.88	+0.0
1,587,643	+		PFLU_RS07120	0.88	+1.1
1,587,643	+		PFLU_RS07120	0.88	+0.8
1,587,643	+		PFLU_RS07120	0.88	+0.2
1,587,644	-		PFLU_RS07120	0.88	+0.4
1,587,644	-		PFLU_RS07120	0.88	-0.2
1,587,644	-		PFLU_RS07120	0.88	-1.2
1,587,644	-		PFLU_RS07120	0.88	+0.4
1,587,644	-		PFLU_RS07120	0.88	+0.7
1,587,644	-		PFLU_RS07120	0.88	-1.3
1,587,682	+		PFLU_RS07120	0.89	-0.0
1,587,683	-		PFLU_RS07120	0.90	-0.2
1,587,741	+				+0.7
1,587,741	+				+0.6
1,587,741	+				+1.7
1,587,741	+				+0.3
1,587,741	+				+0.3
1,587,741	+				-0.5
1,587,741	+				+1.1
1,587,741	+				+0.9
1,587,741	+				+0.9
1,587,741	+				+0.2
1,587,741	+				-0.5
1,587,741	+				-0.5
1,587,741	+				+0.4
1,587,741	+				+0.7
1,587,741	+				-0.2
1,587,741	+				+0.8
1,587,742	-				+0.7
1,587,742	-				+0.8
1,587,742	-				+0.1
1,587,742	-				+0.5
1,587,742	-				-1.4
1,587,742	-				+1.0
1,587,742	-				+0.2
1,587,742	-				-0.4
1,587,742	-				+0.0
1,587,742	-				+0.4
1,587,742	-				-0.7
1,587,742	-				+0.2
1,587,742	-				+1.6
1,587,742	-				+0.4
1,587,742	-				-0.8
1,587,769	+				+1.3
1,587,777	+				-0.6
1,587,777	+				+0.5
1,587,777	+				+0.4
1,587,777	+				-0.1
1,587,777	+				+0.2
1,587,778	-				-0.6
1,587,778	-				+0.7
1,587,778	-				+0.1
1,587,778	-				+0.7
1,587,778	-				+0.2
1,587,778	-				+1.6
1,587,778	-				-0.1
1,587,778	-				+0.1
1,587,778	-				-0.3
1,587,778	-				-0.0
1,587,778	-				+0.9
1,587,780	+				-0.2
1,587,780	+				+0.2
1,587,780	+				+0.6
1,587,780	+				-0.5
1,587,781	-				-0.6
1,587,781	-				-0.4
1,587,781	-				-0.9
1,587,781	-				+1.4
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1,588,634	-		PFLU_RS07125	0.20	+1.8
1,588,634	-		PFLU_RS07125	0.20	+0.1
1,588,669	+		PFLU_RS07125	0.22	-0.0
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1,588,731	-		PFLU_RS07125	0.24	+1.0
1,588,731	-		PFLU_RS07125	0.24	+0.3
1,588,787	-		PFLU_RS07125	0.27	-0.9