Strain Fitness in Variovorax sp. OAS795 around ABID97_RS05710

Experiment: Plant outgrowth control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant outgrowth control
1,202,098	+		ABID97_RS05705	0.51	-0.6
1,202,098	+		ABID97_RS05705	0.51	-2.4
1,202,099	-		ABID97_RS05705	0.51	-2.9
1,202,099	-		ABID97_RS05705	0.51	-1.7
1,202,111	-		ABID97_RS05705	0.52	-3.2
1,202,134	+		ABID97_RS05705	0.54	-3.3
1,202,134	+		ABID97_RS05705	0.54	-1.5
1,202,134	+		ABID97_RS05705	0.54	-1.5
1,202,134	+		ABID97_RS05705	0.54	+0.0
1,202,134	+		ABID97_RS05705	0.54	-3.6
1,202,134	+		ABID97_RS05705	0.54	-2.3
1,202,134	+		ABID97_RS05705	0.54	-1.6
1,202,167	+		ABID97_RS05705	0.58	-1.0
1,202,236	+		ABID97_RS05705	0.64	+1.0
1,202,237	-		ABID97_RS05705	0.64	-4.6
1,202,237	-		ABID97_RS05705	0.64	-0.0
1,202,237	-		ABID97_RS05705	0.64	-1.7
1,202,365	+		ABID97_RS05705	0.77	-1.8
1,202,366	-		ABID97_RS05705	0.77	-1.4
1,202,366	-		ABID97_RS05705	0.77	-1.6
1,202,428	+		ABID97_RS05705	0.83	-4.0
1,202,428	+		ABID97_RS05705	0.83	-1.9
1,202,429	-		ABID97_RS05705	0.83	-0.5
1,202,510	-				-2.2
1,202,510	-				-4.3
1,202,527	+				-1.6
1,202,528	-				-2.8
1,202,528	-				-2.5
1,202,557	+				-1.7
1,202,557	+				-0.6
1,202,557	+				-1.1
1,202,557	+				-2.2
1,202,557	+				-3.7
1,202,557	+				-2.5
1,202,558	-				-0.8
1,202,585	+				-3.7
1,202,585	+				-0.6
1,202,586	-				-2.7
1,202,586	-				-4.7
1,202,590	-				-1.9
1,202,622	-				-0.1
1,202,625	-				+1.6
1,202,720	+				-0.0
1,202,720	+				-2.0
1,202,721	-				-0.0
1,202,721	-				+1.0
1,202,723	+				-0.5
1,202,723	+				+0.3
1,202,723	+				-0.2
1,202,723	+				-0.6
1,202,723	+				-0.6
1,202,724	-				+0.0
1,202,732	+				-0.1
1,202,733	-				+0.1
1,202,733	-				+0.3
1,202,733	-				-0.1
1,202,739	+				-0.1
1,202,743	+				+0.5
1,202,744	-				-0.3
1,202,744	-				-0.0
1,202,744	-				+0.3
1,202,744	-				-0.1
1,202,744	-				+0.2
1,202,744	-				+0.6
1,202,762	+				-0.5
1,202,762	+				-0.1
1,202,763	-				+0.0
1,202,763	-				+1.0
1,202,812	+				+0.1
1,202,813	-				+0.5
1,202,838	+				-0.4
1,202,838	+				-0.0
1,202,838	+				-0.1
1,202,838	+				-0.0
1,202,838	+				+0.4
1,202,839	-				-2.9
1,202,839	-				+0.5
1,202,839	-				+0.1
1,202,882	-				+0.6
1,202,884	+				-0.6
1,202,884	+				+0.1
1,202,884	+				+0.3
1,202,884	+				+0.4
1,202,885	-				+0.7
1,202,885	-				+0.2
1,202,885	-				+0.5
1,202,888	+				-0.1
1,202,888	+				-0.3
1,202,888	+				-1.8
1,202,888	+				-1.4
1,202,889	-				-0.0
1,202,889	-				-0.5
1,202,889	-				+0.4
1,202,906	+				+0.2
1,202,906	+				+1.0
1,202,906	+				+0.1
1,202,907	-				+0.7
1,202,971	+				+0.4
1,202,971	+				+1.2
1,202,971	+				-0.4
1,202,972	-				+0.2
1,202,972	-				-0.3
1,202,972	-				+0.2
1,202,972	-				+0.4
1,202,972	-				-0.7
1,202,972	-				+0.0
1,202,972	-				+0.1
1,202,983	+				-0.0
1,202,983	+				+0.2
1,202,984	-				-0.4
1,202,984	-				-0.2
1,202,984	-				+0.4
1,202,996	+				-0.9
1,202,996	+				-0.3
1,202,997	-				-0.0
1,202,997	-				-0.3
1,202,997	-				-0.1
1,202,997	-				-0.6
1,202,997	-				+0.4
1,203,091	+				-4.9
1,203,091	+				-1.1
1,203,091	+				-2.0
1,203,091	+				-1.3
1,203,819	-		ABID97_RS05710	0.20	-1.4
1,203,825	+		ABID97_RS05710	0.20	-3.0
1,203,825	+		ABID97_RS05710	0.20	-2.4
1,203,826	-		ABID97_RS05710	0.20	-2.7
1,203,873	+		ABID97_RS05710	0.22	-1.6
1,203,873	+		ABID97_RS05710	0.22	-2.6
1,203,873	+		ABID97_RS05710	0.22	-2.2
1,203,873	+		ABID97_RS05710	0.22	-1.8
1,203,874	-		ABID97_RS05710	0.22	-5.0
1,203,874	-		ABID97_RS05710	0.22	-2.3
1,203,906	+		ABID97_RS05710	0.22	-2.8
1,203,906	+		ABID97_RS05710	0.22	-1.7
1,203,907	-		ABID97_RS05710	0.22	-2.3
1,203,907	-		ABID97_RS05710	0.22	-0.4
1,203,907	-		ABID97_RS05710	0.22	-2.8
1,203,918	+		ABID97_RS05710	0.23	-4.2
1,203,919	-		ABID97_RS05710	0.23	-3.9
1,204,149	+		ABID97_RS05710	0.28	-2.0
1,204,149	+		ABID97_RS05710	0.28	-2.0
1,204,150	-		ABID97_RS05710	0.28	-1.1
1,204,317	+		ABID97_RS05710	0.33	-2.6
1,204,377	+		ABID97_RS05710	0.34	-2.0
1,204,377	+		ABID97_RS05710	0.34	-1.9
1,204,377	+		ABID97_RS05710	0.34	-1.6
1,204,377	+		ABID97_RS05710	0.34	-2.3
1,204,378	-		ABID97_RS05710	0.34	-2.9
1,204,378	-		ABID97_RS05710	0.34	-1.8
1,204,378	-		ABID97_RS05710	0.34	-2.3
1,204,380	+		ABID97_RS05710	0.34	-2.6
1,204,381	-		ABID97_RS05710	0.34	-2.7
1,204,381	-		ABID97_RS05710	0.34	-4.9
1,204,381	-		ABID97_RS05710	0.34	-3.1
1,204,441	-		ABID97_RS05710	0.36	-4.7
1,204,794	+		ABID97_RS05710	0.44	-3.4
1,204,794	+		ABID97_RS05710	0.44	-2.6
1,204,795	-		ABID97_RS05710	0.44	-3.6
1,204,848	+		ABID97_RS05710	0.46	-1.5
1,204,860	+		ABID97_RS05710	0.46	-0.0
1,204,860	+		ABID97_RS05710	0.46	-3.8
1,204,861	-		ABID97_RS05710	0.46	-2.9
1,204,861	-		ABID97_RS05710	0.46	-2.2
1,204,861	-		ABID97_RS05710	0.46	-2.7
1,204,861	-		ABID97_RS05710	0.46	-1.1
1,204,882	+		ABID97_RS05710	0.47	-2.4
1,204,882	+		ABID97_RS05710	0.47	-3.6
1,204,883	-		ABID97_RS05710	0.47	-2.2
1,204,883	-		ABID97_RS05710	0.47	-2.3
1,204,883	-		ABID97_RS05710	0.47	-2.4
1,204,883	-		ABID97_RS05710	0.47	-2.2
1,204,883	-		ABID97_RS05710	0.47	-2.9
1,204,980	+		ABID97_RS05710	0.49	-0.6
1,205,007	+		ABID97_RS05710	0.50	-3.4
1,205,007	+		ABID97_RS05710	0.50	-2.7
1,205,007	+		ABID97_RS05710	0.50	-2.6
1,205,008	-		ABID97_RS05710	0.50	-0.3
1,205,008	-		ABID97_RS05710	0.50	-4.6
1,205,243	+		ABID97_RS05710	0.55	-3.1
1,205,243	+		ABID97_RS05710	0.55	-1.6
1,205,243	+		ABID97_RS05710	0.55	-4.0
1,205,243	+		ABID97_RS05710	0.55	-1.8
1,205,243	+		ABID97_RS05710	0.55	-2.8
1,205,244	-		ABID97_RS05710	0.55	-3.3
1,205,244	-		ABID97_RS05710	0.55	-1.6
1,205,244	-		ABID97_RS05710	0.55	-2.3
1,205,244	-		ABID97_RS05710	0.55	-2.0
1,205,244	-		ABID97_RS05710	0.55	-2.3
1,205,244	-		ABID97_RS05710	0.55	-3.0
1,205,244	-		ABID97_RS05710	0.55	-2.7
1,205,244	-		ABID97_RS05710	0.55	-0.7
1,205,244	-		ABID97_RS05710	0.55	-2.3
1,205,628	+		ABID97_RS05710	0.65	-1.7
1,205,766	+		ABID97_RS05710	0.68	-1.6
1,205,766	+		ABID97_RS05710	0.68	-2.2
1,205,881	+		ABID97_RS05710	0.71	-3.9
1,205,881	+		ABID97_RS05710	0.71	-1.8
1,205,882	-		ABID97_RS05710	0.71	-1.6
1,205,882	-		ABID97_RS05710	0.71	-1.6
1,205,882	-		ABID97_RS05710	0.71	-0.1
1,206,156	+		ABID97_RS05710	0.78	-1.4
1,206,156	+		ABID97_RS05710	0.78	-2.8
1,206,157	-		ABID97_RS05710	0.78	-1.5
1,206,157	-		ABID97_RS05710	0.78	-5.0
1,206,195	+		ABID97_RS05710	0.79	-3.1
1,206,195	+		ABID97_RS05710	0.79	-2.4
1,206,195	+		ABID97_RS05710	0.79	-1.8
1,206,196	-		ABID97_RS05710	0.79	-1.0
1,206,208	-		ABID97_RS05710	0.79	-2.8
1,206,208	-		ABID97_RS05710	0.79	-3.3
1,206,214	-		ABID97_RS05710	0.79	-2.1
1,206,341	-		ABID97_RS05710	0.83	-3.3
1,206,341	-		ABID97_RS05710	0.83	-2.2
1,206,341	-		ABID97_RS05710	0.83	-0.6
1,206,341	-		ABID97_RS05710	0.83	-1.4
1,206,366	+		ABID97_RS05710	0.83	-3.4
1,206,366	+		ABID97_RS05710	0.83	-0.5
1,206,366	+		ABID97_RS05710	0.83	-2.2
1,206,366	+		ABID97_RS05710	0.83	-0.7
1,206,367	-		ABID97_RS05710	0.83	-2.7
1,206,367	-		ABID97_RS05710	0.83	-1.9
1,206,367	-		ABID97_RS05710	0.83	-2.4
1,206,387	+		ABID97_RS05710	0.84	-2.0
1,206,387	+		ABID97_RS05710	0.84	-3.2
1,206,388	-		ABID97_RS05710	0.84	-1.8
1,206,388	-		ABID97_RS05710	0.84	-0.0
1,206,388	-		ABID97_RS05710	0.84	-4.2
1,206,618	+		ABID97_RS05710	0.89	-1.4
1,206,618	+		ABID97_RS05710	0.89	-3.4
1,206,619	-		ABID97_RS05710	0.89	-1.3
1,206,619	-		ABID97_RS05710	0.89	-2.6
1,206,619	-		ABID97_RS05710	0.89	-1.2
1,206,619	-		ABID97_RS05710	0.89	-3.6
1,206,663	+				-3.2
1,206,663	+				-3.1
1,206,663	+				-2.4
1,206,663	+				-1.6
1,206,663	+				-0.6
1,206,663	+				-1.7
1,206,664	-				-2.7
1,206,664	-				-2.0
1,206,664	-				-1.7
1,206,664	-				-2.6
1,206,747	+				+1.0
1,206,793	+				-2.2
1,206,798	+				-2.3
1,206,798	+				-3.0
1,206,799	-				-2.7
1,206,799	-				-2.9
1,206,799	-				-1.6
1,206,834	+				-4.1
1,206,834	+				-2.5
1,206,834	+				-2.6
1,206,901	-				-2.1
1,206,901	-				-2.0
1,206,965	-				-1.4
1,207,858	-				+1.0
1,207,858	-				+0.2
1,207,858	-				-0.9