Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23395 and PS417_23400 are separated by 214 nucleotides PS417_23400 and PS417_23405 are separated by 147 nucleotides
PS417_23395: PS417_23395 - disulfide bond formation protein B, at 5,064,772 to 5,065,278
_23395
PS417_23400: PS417_23400 - dihydropteridine reductase, at 5,065,493 to 5,066,674
_23400
PS417_23405: PS417_23405 - transcriptional regulator, at 5,066,822 to 5,068,345
_23405
Position (kb) 5065
5066
5067 Strain fitness (log2 ratio) -1
0
1
2 at 5065.320 kb on + strand at 5065.320 kb on + strand at 5065.339 kb on - strand at 5065.364 kb on + strand at 5065.365 kb on - strand at 5065.494 kb on + strand at 5065.608 kb on + strand at 5065.691 kb on + strand, within PS417_23400 at 5065.692 kb on - strand, within PS417_23400 at 5065.699 kb on + strand, within PS417_23400 at 5065.716 kb on + strand, within PS417_23400 at 5065.716 kb on + strand, within PS417_23400 at 5065.717 kb on - strand, within PS417_23400 at 5065.977 kb on + strand, within PS417_23400 at 5065.977 kb on + strand, within PS417_23400 at 5065.978 kb on - strand, within PS417_23400 at 5065.978 kb on - strand, within PS417_23400 at 5065.978 kb on - strand, within PS417_23400 at 5066.055 kb on + strand, within PS417_23400 at 5066.055 kb on + strand, within PS417_23400 at 5066.056 kb on - strand, within PS417_23400 at 5066.103 kb on + strand, within PS417_23400 at 5066.103 kb on + strand, within PS417_23400 at 5066.103 kb on + strand, within PS417_23400 at 5066.103 kb on + strand at 5066.103 kb on + strand, within PS417_23400 at 5066.103 kb on + strand, within PS417_23400 at 5066.103 kb on + strand, within PS417_23400 at 5066.103 kb on + strand, within PS417_23400 at 5066.104 kb on - strand, within PS417_23400 at 5066.104 kb on - strand, within PS417_23400 at 5066.154 kb on + strand, within PS417_23400 at 5066.348 kb on + strand, within PS417_23400 at 5066.484 kb on + strand, within PS417_23400 at 5066.485 kb on - strand, within PS417_23400 at 5066.736 kb on - strand at 5066.764 kb on + strand at 5066.801 kb on + strand at 5066.910 kb on + strand at 5066.911 kb on - strand at 5066.911 kb on - strand at 5066.911 kb on - strand at 5066.911 kb on - strand at 5066.913 kb on + strand at 5066.914 kb on - strand at 5067.119 kb on + strand, within PS417_23405 at 5067.317 kb on - strand, within PS417_23405 at 5067.347 kb on + strand, within PS417_23405
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 5,065,320 + +0.4 5,065,320 + +0.1 5,065,339 - -0.0 5,065,364 + -0.5 5,065,365 - +0.9 5,065,494 + -0.4 5,065,608 + +1.1 5,065,691 + PS417_23400 0.17 +0.6 5,065,692 - PS417_23400 0.17 -0.6 5,065,699 + PS417_23400 0.17 +0.6 5,065,716 + PS417_23400 0.19 -0.3 5,065,716 + PS417_23400 0.19 +0.7 5,065,717 - PS417_23400 0.19 +0.9 5,065,977 + PS417_23400 0.41 +0.7 5,065,977 + PS417_23400 0.41 -0.3 5,065,978 - PS417_23400 0.41 -0.6 5,065,978 - PS417_23400 0.41 +0.1 5,065,978 - PS417_23400 0.41 +0.3 5,066,055 + PS417_23400 0.48 +1.2 5,066,055 + PS417_23400 0.48 +0.1 5,066,056 - PS417_23400 0.48 -1.1 5,066,103 + PS417_23400 0.52 +1.1 5,066,103 + PS417_23400 0.52 +0.3 5,066,103 + PS417_23400 0.52 +1.1 5,066,103 + +2.4 5,066,103 + PS417_23400 0.52 +0.5 5,066,103 + PS417_23400 0.52 +0.7 5,066,103 + PS417_23400 0.52 -0.2 5,066,103 + PS417_23400 0.52 +0.3 5,066,104 - PS417_23400 0.52 +0.9 5,066,104 - PS417_23400 0.52 +0.3 5,066,154 + PS417_23400 0.56 -1.2 5,066,348 + PS417_23400 0.72 +0.1 5,066,484 + PS417_23400 0.84 +0.4 5,066,485 - PS417_23400 0.84 +0.1 5,066,736 - -1.5 5,066,764 + -0.3 5,066,801 + +0.2 5,066,910 + +0.6 5,066,911 - +0.4 5,066,911 - +0.3 5,066,911 - -0.5 5,066,911 - -1.0 5,066,913 + -0.3 5,066,914 - -1.1 5,067,119 + PS417_23405 0.19 +0.2 5,067,317 - PS417_23405 0.32 +0.2 5,067,347 + PS417_23405 0.34 -0.7
Or see this region's nucleotide sequence