Experiment: R2A outgrowth control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02045 and ABID97_RS02050 are separated by 118 nucleotides ABID97_RS02050 and ABID97_RS02055 are separated by 136 nucleotides
ABID97_RS02045: ABID97_RS02045 - glutathione S-transferase N-terminal domain-containing protein, at 410,613 to 411,224
_RS02045
ABID97_RS02050: ABID97_RS02050 - adenylosuccinate lyase, at 411,343 to 412,723
_RS02050
ABID97_RS02055: ABID97_RS02055 - PepSY-associated TM helix domain-containing protein, at 412,860 to 413,996
_RS02055
Position (kb) 411
412
413 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 410.365 kb on + strand at 410.365 kb on + strand at 410.366 kb on - strand at 410.405 kb on - strand at 410.544 kb on + strand at 410.659 kb on + strand at 410.660 kb on - strand at 410.660 kb on - strand at 411.019 kb on + strand, within ABID97_RS02045 at 411.019 kb on + strand, within ABID97_RS02045 at 411.019 kb on + strand, within ABID97_RS02045 at 411.020 kb on - strand, within ABID97_RS02045 at 411.020 kb on - strand, within ABID97_RS02045 at 411.148 kb on + strand, within ABID97_RS02045 at 411.149 kb on - strand, within ABID97_RS02045 at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.193 kb on + strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.194 kb on - strand at 411.249 kb on + strand at 412.714 kb on + strand at 412.842 kb on + strand at 412.842 kb on + strand at 412.843 kb on - strand at 412.843 kb on - strand at 412.843 kb on - strand at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.145 kb on + strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.146 kb on - strand, within ABID97_RS02055 at 413.168 kb on + strand, within ABID97_RS02055 at 413.168 kb on + strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.169 kb on - strand, within ABID97_RS02055 at 413.175 kb on + strand, within ABID97_RS02055 at 413.232 kb on + strand, within ABID97_RS02055 at 413.232 kb on + strand, within ABID97_RS02055 at 413.232 kb on + strand, within ABID97_RS02055 at 413.233 kb on - strand, within ABID97_RS02055 at 413.233 kb on - strand, within ABID97_RS02055 at 413.313 kb on + strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.314 kb on - strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.481 kb on + strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.482 kb on - strand, within ABID97_RS02055 at 413.643 kb on + strand, within ABID97_RS02055 at 413.643 kb on + strand, within ABID97_RS02055 at 413.643 kb on + strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055 at 413.644 kb on - strand, within ABID97_RS02055
Per-strain Table
Position Strand Gene LocusTag Fraction R2A outgrowth control remove 410,365 + -0.1 410,365 + +0.3 410,366 - +0.5 410,405 - +1.5 410,544 + -0.5 410,659 + -1.5 410,660 - -0.8 410,660 - +0.5 411,019 + ABID97_RS02045 0.66 -0.3 411,019 + ABID97_RS02045 0.66 -0.4 411,019 + ABID97_RS02045 0.66 -0.3 411,020 - ABID97_RS02045 0.67 -0.4 411,020 - ABID97_RS02045 0.67 +0.1 411,148 + ABID97_RS02045 0.87 -0.5 411,149 - ABID97_RS02045 0.88 -0.2 411,193 + +4.5 411,193 + +0.2 411,193 + -0.9 411,193 + +0.3 411,193 + -0.2 411,193 + +0.1 411,194 - +0.3 411,194 - -0.4 411,194 - -0.1 411,194 - +0.0 411,194 - +0.4 411,194 - -0.3 411,249 + -0.6 412,714 + -2.6 412,842 + +0.6 412,842 + -0.5 412,843 - -1.1 412,843 - -2.3 412,843 - -0.9 413,145 + ABID97_RS02055 0.25 -0.2 413,145 + ABID97_RS02055 0.25 -0.1 413,145 + ABID97_RS02055 0.25 -0.9 413,145 + ABID97_RS02055 0.25 +0.1 413,145 + ABID97_RS02055 0.25 -1.1 413,145 + ABID97_RS02055 0.25 -0.9 413,146 - ABID97_RS02055 0.25 -0.7 413,146 - ABID97_RS02055 0.25 -0.3 413,146 - ABID97_RS02055 0.25 -0.2 413,146 - ABID97_RS02055 0.25 -0.3 413,146 - ABID97_RS02055 0.25 -0.3 413,146 - ABID97_RS02055 0.25 -0.0 413,146 - ABID97_RS02055 0.25 -1.2 413,168 + ABID97_RS02055 0.27 -1.7 413,168 + ABID97_RS02055 0.27 -2.1 413,169 - ABID97_RS02055 0.27 -0.9 413,169 - ABID97_RS02055 0.27 -3.8 413,169 - ABID97_RS02055 0.27 -2.2 413,169 - ABID97_RS02055 0.27 -2.8 413,169 - ABID97_RS02055 0.27 -2.6 413,169 - ABID97_RS02055 0.27 -1.5 413,175 + ABID97_RS02055 0.28 -1.0 413,232 + ABID97_RS02055 0.33 -0.3 413,232 + ABID97_RS02055 0.33 +1.6 413,232 + ABID97_RS02055 0.33 -2.1 413,233 - ABID97_RS02055 0.33 -2.3 413,233 - ABID97_RS02055 0.33 +0.3 413,313 + ABID97_RS02055 0.40 -1.2 413,314 - ABID97_RS02055 0.40 +0.3 413,314 - ABID97_RS02055 0.40 -1.1 413,314 - ABID97_RS02055 0.40 +0.3 413,314 - ABID97_RS02055 0.40 -2.1 413,481 + ABID97_RS02055 0.55 -0.0 413,481 + ABID97_RS02055 0.55 -0.6 413,481 + ABID97_RS02055 0.55 -1.1 413,481 + ABID97_RS02055 0.55 +0.0 413,481 + ABID97_RS02055 0.55 -0.7 413,481 + ABID97_RS02055 0.55 -0.6 413,481 + ABID97_RS02055 0.55 +0.5 413,481 + ABID97_RS02055 0.55 -0.3 413,481 + ABID97_RS02055 0.55 -0.0 413,481 + ABID97_RS02055 0.55 -0.2 413,481 + ABID97_RS02055 0.55 -0.6 413,481 + ABID97_RS02055 0.55 -0.1 413,481 + ABID97_RS02055 0.55 -0.7 413,481 + ABID97_RS02055 0.55 -1.8 413,481 + ABID97_RS02055 0.55 +0.1 413,482 - ABID97_RS02055 0.55 -0.3 413,482 - ABID97_RS02055 0.55 -0.7 413,482 - ABID97_RS02055 0.55 -0.7 413,482 - ABID97_RS02055 0.55 -0.4 413,482 - ABID97_RS02055 0.55 -0.8 413,482 - ABID97_RS02055 0.55 -2.6 413,482 - ABID97_RS02055 0.55 -2.3 413,482 - ABID97_RS02055 0.55 -0.2 413,482 - ABID97_RS02055 0.55 +0.8 413,482 - ABID97_RS02055 0.55 -1.9 413,482 - ABID97_RS02055 0.55 -2.1 413,643 + ABID97_RS02055 0.69 -0.9 413,643 + ABID97_RS02055 0.69 -0.2 413,643 + ABID97_RS02055 0.69 -0.1 413,644 - ABID97_RS02055 0.69 -0.8 413,644 - ABID97_RS02055 0.69 -0.5 413,644 - ABID97_RS02055 0.69 -0.5 413,644 - ABID97_RS02055 0.69 +0.4
Or see this region's nucleotide sequence