Strain Fitness in Escherichia coli BW25113 around b3725
Experiment: hexanol 0.31 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | hexanol 0.31 vol% |
---|---|---|---|---|---|
remove | |||||
3,904,668 | + | -0.5 | |||
3,904,668 | + | +0.6 | |||
3,904,798 | - | +0.6 | |||
3,904,861 | - | -2.5 | |||
3,904,868 | - | +2.0 | |||
3,904,896 | - | +0.6 | |||
3,904,930 | - | +0.4 | |||
3,905,604 | - | +0.4 | |||
3,905,604 | - | -0.9 | |||
3,905,604 | - | -1.8 | |||
3,905,608 | + | -1.2 | |||
3,905,665 | - | -0.5 | |||
3,905,700 | + | pstB | b3725 | 0.11 | -1.3 |
3,906,128 | + | pstB | b3725 | 0.66 | -0.5 |
3,906,136 | - | pstB | b3725 | 0.67 | -2.0 |
3,906,381 | - | -1.4 | |||
3,906,387 | - | -2.2 | |||
3,906,468 | - | -1.9 | |||
3,906,483 | + | -1.6 | |||
3,906,493 | - | +0.1 | |||
3,906,493 | - | +1.3 | |||
3,906,524 | - | -0.4 | |||
3,906,526 | + | -0.8 | |||
3,906,538 | + | -2.2 | |||
3,906,538 | + | -0.3 | |||
3,906,538 | + | -0.9 | |||
3,906,538 | + | -1.1 | |||
3,906,546 | - | +1.1 | |||
3,906,546 | - | -0.6 | |||
3,906,546 | - | +1.2 | |||
3,906,546 | - | +0.3 | |||
3,906,546 | - | +1.5 | |||
3,906,574 | - | +0.3 | |||
3,906,574 | - | +0.2 | |||
3,906,579 | + | -0.5 | |||
3,906,587 | - | +0.1 | |||
3,906,587 | - | -1.5 | |||
3,906,614 | + | +0.3 | |||
3,906,642 | - | +0.1 | |||
3,906,642 | - | -0.8 | |||
3,906,644 | - | +0.0 | |||
3,906,779 | - | pstA | b3726 | 0.23 | -0.4 |
3,906,835 | - | pstA | b3726 | 0.30 | +1.3 |
3,906,836 | - | pstA | b3726 | 0.30 | +0.3 |
3,906,888 | - | pstA | b3726 | 0.35 | +1.7 |
3,906,905 | - | pstA | b3726 | 0.37 | -0.2 |
3,906,918 | + | pstA | b3726 | 0.39 | -1.0 |
3,906,928 | - | pstA | b3726 | 0.40 | +1.0 |
3,906,951 | - | pstA | b3726 | 0.43 | +0.7 |
3,906,992 | - | pstA | b3726 | 0.47 | -0.4 |
3,907,077 | - | pstA | b3726 | 0.57 | +0.9 |
3,907,084 | - | pstA | b3726 | 0.57 | -1.0 |
3,907,084 | - | pstA | b3726 | 0.57 | +0.6 |
3,907,089 | - | pstA | b3726 | 0.58 | -0.3 |
3,907,199 | - | pstA | b3726 | 0.70 | +0.2 |
3,907,218 | - | pstA | b3726 | 0.73 | +0.3 |
3,907,218 | - | pstA | b3726 | 0.73 | -0.4 |
3,907,236 | - | pstA | b3726 | 0.75 | -0.6 |
3,907,236 | - | pstA | b3726 | 0.75 | -0.8 |
3,907,337 | - | pstA | b3726 | 0.86 | -1.2 |
Or see this region's nucleotide sequence