Strain Fitness in Ralstonia solanacearum UW163 around UW163_RS03650

Experiment: Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=stem; GrowthSubstrate=calcine_clay; Collection=direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntUW163_RS03645 and UW163_RS03650 overlap by 4 nucleotidesUW163_RS03650 and UW163_RS03655 are separated by 9 nucleotidesUW163_RS03655 and UW163_RS03660 overlap by 4 nucleotides UW163_RS03645: UW163_RS03645 - FAD-dependent oxidoreductase, at 758,885 to 760,024 _RS03645 UW163_RS03650: UW163_RS03650 - sulfur carrier protein ThiS, at 760,021 to 760,236 _RS03650 UW163_RS03655: UW163_RS03655 - thiazole synthase, at 760,246 to 761,073 _RS03655 UW163_RS03660: UW163_RS03660 - thiamine phosphate synthase, at 761,070 to 762,236 _RS03660 Position (kb) 760 761Strain fitness (log2 ratio) -1 0 1at 760.234 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=Tomato_cv_Moneymaker; PlantTreatment=None; Sample=stem; GrowthSubstrate=calcine_clay; Collection=direct
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760,234 + +1.4

Or see this region's nucleotide sequence