Experiment: Lomefloxacin 0.0001 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02485 and PS417_02490 are separated by 95 nucleotides PS417_02490 and PS417_02495 are separated by 12 nucleotides PS417_02495 and PS417_02500 are separated by 96 nucleotides
PS417_02485: PS417_02485 - tRNA delta(2)-isopentenylpyrophosphate transferase, at 568,415 to 569,386
_02485
PS417_02490: PS417_02490 - RNA-binding protein Hfq, at 569,482 to 569,742
_02490
PS417_02495: PS417_02495 - GTPase HflX, at 569,755 to 571,056
_02495
PS417_02500: PS417_02500 - membrane protein, at 571,153 to 572,328
_02500
Position (kb) 569
570
571
572 Strain fitness (log2 ratio) -2
-1
0
1 at 569.016 kb on - strand, within PS417_02485 at 569.018 kb on - strand, within PS417_02485 at 569.092 kb on + strand, within PS417_02485 at 569.093 kb on - strand, within PS417_02485 at 569.124 kb on + strand, within PS417_02485 at 569.179 kb on - strand, within PS417_02485 at 569.466 kb on + strand at 569.733 kb on + strand at 569.743 kb on + strand at 569.744 kb on - strand at 569.744 kb on - strand at 569.744 kb on - strand at 569.898 kb on - strand, within PS417_02495 at 570.028 kb on - strand, within PS417_02495 at 570.370 kb on + strand, within PS417_02495 at 570.373 kb on - strand, within PS417_02495 at 570.516 kb on - strand, within PS417_02495 at 570.565 kb on - strand, within PS417_02495 at 570.703 kb on + strand, within PS417_02495 at 570.703 kb on + strand, within PS417_02495 at 571.019 kb on + strand at 571.065 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0001 mM remove 569,016 - PS417_02485 0.62 -0.2 569,018 - PS417_02485 0.62 -0.7 569,092 + PS417_02485 0.70 -0.1 569,093 - PS417_02485 0.70 -0.8 569,124 + PS417_02485 0.73 +0.1 569,179 - PS417_02485 0.79 -1.8 569,466 + -0.4 569,733 + -0.4 569,743 + -0.4 569,744 - -0.5 569,744 - -0.2 569,744 - +0.5 569,898 - PS417_02495 0.11 -0.3 570,028 - PS417_02495 0.21 -0.7 570,370 + PS417_02495 0.47 -0.6 570,373 - PS417_02495 0.47 -0.6 570,516 - PS417_02495 0.58 -0.9 570,565 - PS417_02495 0.62 -0.7 570,703 + PS417_02495 0.73 -0.4 570,703 + PS417_02495 0.73 -2.3 571,019 + +0.2 571,065 + +0.6
Or see this region's nucleotide sequence