Strain Fitness in Escherichia coli BW25113 around b1490
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,562,881 | - | b1489 | b1489 | 0.63 | -0.3 |
1,562,955 | + | b1489 | b1489 | 0.67 | -0.9 |
1,562,955 | + | b1489 | b1489 | 0.67 | -0.2 |
1,563,208 | - | b1489 | b1489 | 0.77 | -0.6 |
1,563,498 | - | b1489 | b1489 | 0.89 | +0.5 |
1,563,498 | - | b1489 | b1489 | 0.89 | -0.3 |
1,563,503 | - | b1489 | b1489 | 0.89 | -0.2 |
1,563,530 | + | -0.3 | |||
1,563,530 | + | -0.9 | |||
1,563,539 | + | -2.5 | |||
1,563,590 | - | +1.0 | |||
1,563,590 | - | +0.7 | |||
1,563,800 | - | -0.2 | |||
1,563,885 | + | +0.4 | |||
1,563,982 | + | yddV | b1490 | 0.14 | -0.7 |
1,563,987 | - | yddV | b1490 | 0.15 | +0.9 |
1,564,087 | - | yddV | b1490 | 0.22 | -0.1 |
1,564,122 | + | yddV | b1490 | 0.25 | -0.1 |
1,564,122 | + | yddV | b1490 | 0.25 | +0.5 |
1,564,130 | - | yddV | b1490 | 0.25 | +0.4 |
1,564,143 | - | yddV | b1490 | 0.26 | +0.2 |
1,564,180 | - | yddV | b1490 | 0.29 | +0.9 |
1,564,189 | + | yddV | b1490 | 0.29 | +0.1 |
1,564,194 | - | yddV | b1490 | 0.30 | -0.5 |
1,564,197 | - | yddV | b1490 | 0.30 | -0.6 |
1,564,223 | + | yddV | b1490 | 0.32 | +0.1 |
1,564,270 | + | yddV | b1490 | 0.35 | +0.5 |
1,564,270 | + | yddV | b1490 | 0.35 | +1.0 |
1,564,279 | - | yddV | b1490 | 0.36 | +0.0 |
1,564,412 | - | yddV | b1490 | 0.46 | +0.2 |
1,564,451 | + | yddV | b1490 | 0.48 | +0.8 |
1,564,451 | + | yddV | b1490 | 0.48 | +0.4 |
1,564,460 | - | yddV | b1490 | 0.49 | -0.1 |
1,564,872 | + | yddV | b1490 | 0.79 | +0.3 |
1,564,876 | - | yddV | b1490 | 0.79 | -0.1 |
1,564,965 | + | yddV | b1490 | 0.86 | +0.3 |
1,565,116 | + | -0.2 | |||
1,565,122 | + | -0.1 | |||
1,565,295 | + | +0.5 | |||
1,565,307 | - | +0.1 | |||
1,565,313 | - | -0.2 | |||
1,565,332 | - | +1.0 | |||
1,565,460 | - | +0.3 | |||
1,565,474 | - | +0.5 | |||
1,565,474 | - | -0.4 | |||
1,565,494 | - | -0.0 | |||
1,565,551 | - | +0.5 | |||
1,565,551 | - | +0.4 | |||
1,565,580 | - | +0.7 | |||
1,565,697 | + | yddW | b1491 | 0.13 | -0.0 |
1,565,697 | + | yddW | b1491 | 0.13 | +0.5 |
1,565,744 | - | yddW | b1491 | 0.16 | -0.8 |
1,566,047 | + | yddW | b1491 | 0.39 | +0.7 |
1,566,127 | - | yddW | b1491 | 0.45 | +1.1 |
1,566,158 | + | yddW | b1491 | 0.48 | -0.2 |
Or see this region's nucleotide sequence