Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28350 and PS417_28355 are separated by 87 nucleotides PS417_28355 and PS417_28360 overlap by 10 nucleotides PS417_28360 and PS417_28365 are separated by 65 nucleotides
PS417_28350: PS417_28350 - fatty acid methyltransferase, at 6,119,426 to 6,120,610
_28350
PS417_28355: PS417_28355 - cardiolipin synthetase, at 6,120,698 to 6,121,486
_28355
PS417_28360: PS417_28360 - hypothetical protein, at 6,121,477 to 6,122,322
_28360
PS417_28365: PS417_28365 - membrane protein, at 6,122,388 to 6,122,642
_28365
Position (kb)
6120
6121
6122 Strain fitness (log2 ratio)
-2
-1
0
1 at 6119.751 kb on + strand, within PS417_28350 at 6119.784 kb on - strand, within PS417_28350 at 6119.909 kb on - strand, within PS417_28350 at 6119.909 kb on - strand, within PS417_28350 at 6120.126 kb on + strand, within PS417_28350 at 6120.127 kb on - strand, within PS417_28350 at 6120.228 kb on + strand, within PS417_28350 at 6120.229 kb on - strand, within PS417_28350 at 6120.229 kb on - strand, within PS417_28350 at 6120.259 kb on - strand, within PS417_28350 at 6120.259 kb on - strand, within PS417_28350 at 6120.259 kb on - strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.279 kb on + strand, within PS417_28350 at 6120.280 kb on - strand, within PS417_28350 at 6120.280 kb on - strand, within PS417_28350 at 6120.280 kb on - strand, within PS417_28350 at 6120.293 kb on - strand, within PS417_28350 at 6120.293 kb on - strand, within PS417_28350 at 6120.581 kb on - strand at 6120.584 kb on + strand at 6120.670 kb on - strand at 6120.696 kb on + strand at 6120.696 kb on + strand at 6120.697 kb on - strand at 6120.700 kb on - strand at 6120.871 kb on + strand, within PS417_28355 at 6120.877 kb on - strand, within PS417_28355 at 6121.117 kb on + strand, within PS417_28355 at 6121.251 kb on + strand, within PS417_28355 at 6121.344 kb on + strand, within PS417_28355 at 6121.625 kb on + strand, within PS417_28360 at 6121.676 kb on + strand, within PS417_28360 at 6121.677 kb on - strand, within PS417_28360 at 6121.784 kb on + strand, within PS417_28360 at 6121.883 kb on + strand, within PS417_28360 at 6121.883 kb on + strand, within PS417_28360 at 6121.883 kb on + strand, within PS417_28360 at 6121.884 kb on - strand, within PS417_28360 at 6121.884 kb on - strand, within PS417_28360 at 6121.884 kb on - strand, within PS417_28360 at 6122.180 kb on + strand, within PS417_28360 at 6122.181 kb on - strand, within PS417_28360 at 6122.207 kb on + strand, within PS417_28360 at 6122.267 kb on + strand at 6122.268 kb on - strand at 6122.268 kb on - strand at 6122.268 kb on - strand at 6122.281 kb on + strand at 6122.316 kb on + strand at 6122.316 kb on + strand at 6122.317 kb on - strand at 6122.322 kb on + strand at 6122.323 kb on - strand at 6122.323 kb on - strand at 6122.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 6,119,751 + PS417_28350 0.27 -1.8 6,119,784 - PS417_28350 0.30 -1.6 6,119,909 - PS417_28350 0.41 +0.5 6,119,909 - PS417_28350 0.41 -0.2 6,120,126 + PS417_28350 0.59 -0.1 6,120,127 - PS417_28350 0.59 -0.2 6,120,228 + PS417_28350 0.68 +0.3 6,120,229 - PS417_28350 0.68 -0.2 6,120,229 - PS417_28350 0.68 +1.1 6,120,259 - PS417_28350 0.70 -2.1 6,120,259 - PS417_28350 0.70 -0.3 6,120,259 - PS417_28350 0.70 +1.0 6,120,279 + PS417_28350 0.72 -1.6 6,120,279 + PS417_28350 0.72 -0.2 6,120,279 + PS417_28350 0.72 -0.1 6,120,279 + PS417_28350 0.72 +1.1 6,120,280 - PS417_28350 0.72 -0.4 6,120,280 - PS417_28350 0.72 +0.2 6,120,280 - PS417_28350 0.72 -0.0 6,120,293 - PS417_28350 0.73 +0.3 6,120,293 - PS417_28350 0.73 +0.8 6,120,581 - -0.0 6,120,584 + +0.3 6,120,670 - -0.5 6,120,696 + +0.1 6,120,696 + +0.1 6,120,697 - +0.1 6,120,700 - -0.3 6,120,871 + PS417_28355 0.22 -0.3 6,120,877 - PS417_28355 0.23 -0.9 6,121,117 + PS417_28355 0.53 -0.3 6,121,251 + PS417_28355 0.70 -0.8 6,121,344 + PS417_28355 0.82 +0.2 6,121,625 + PS417_28360 0.17 +1.5 6,121,676 + PS417_28360 0.24 +0.0 6,121,677 - PS417_28360 0.24 -0.3 6,121,784 + PS417_28360 0.36 +0.3 6,121,883 + PS417_28360 0.48 +0.2 6,121,883 + PS417_28360 0.48 -0.8 6,121,883 + PS417_28360 0.48 -0.1 6,121,884 - PS417_28360 0.48 +0.2 6,121,884 - PS417_28360 0.48 +0.0 6,121,884 - PS417_28360 0.48 -0.3 6,122,180 + PS417_28360 0.83 +0.2 6,122,181 - PS417_28360 0.83 +0.8 6,122,207 + PS417_28360 0.86 +1.1 6,122,267 + +0.2 6,122,268 - -0.0 6,122,268 - +0.2 6,122,268 - +0.0 6,122,281 + -0.5 6,122,316 + +0.5 6,122,316 + +0.1 6,122,317 - +0.1 6,122,322 + -0.2 6,122,323 - +0.2 6,122,323 - -0.2 6,122,323 - -0.0
Or see this region's nucleotide sequence