Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27095 and PS417_27100 are separated by 256 nucleotides PS417_27100 and PS417_27105 are separated by 123 nucleotides
PS417_27095: PS417_27095 - AraC family transcriptional regulator, at 5,849,036 to 5,850,001
_27095
PS417_27100: PS417_27100 - phosphohydrolase, at 5,850,258 to 5,850,899
_27100
PS417_27105: PS417_27105 - spermidine/putrescine ABC transporter permease, at 5,851,023 to 5,851,907
_27105
Position (kb) 5850
5851 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5849.276 kb on - strand, within PS417_27095 at 5849.276 kb on - strand, within PS417_27095 at 5849.276 kb on - strand, within PS417_27095 at 5849.334 kb on + strand, within PS417_27095 at 5849.335 kb on - strand, within PS417_27095 at 5849.335 kb on - strand, within PS417_27095 at 5849.487 kb on + strand, within PS417_27095 at 5849.487 kb on + strand, within PS417_27095 at 5849.551 kb on - strand, within PS417_27095 at 5849.783 kb on + strand, within PS417_27095 at 5849.783 kb on + strand, within PS417_27095 at 5849.783 kb on + strand, within PS417_27095 at 5849.783 kb on + strand, within PS417_27095 at 5849.783 kb on + strand, within PS417_27095 at 5849.783 kb on + strand, within PS417_27095 at 5849.784 kb on - strand, within PS417_27095 at 5849.784 kb on - strand, within PS417_27095 at 5849.791 kb on - strand, within PS417_27095 at 5849.791 kb on - strand, within PS417_27095 at 5849.791 kb on - strand, within PS417_27095 at 5849.996 kb on - strand at 5850.013 kb on + strand at 5850.083 kb on + strand at 5850.084 kb on - strand at 5850.084 kb on - strand at 5850.084 kb on - strand at 5850.321 kb on + strand at 5850.322 kb on - strand at 5850.352 kb on - strand, within PS417_27100 at 5850.414 kb on + strand, within PS417_27100 at 5850.414 kb on + strand, within PS417_27100 at 5850.415 kb on - strand, within PS417_27100 at 5850.432 kb on + strand, within PS417_27100 at 5850.679 kb on - strand, within PS417_27100 at 5850.755 kb on + strand, within PS417_27100 at 5850.755 kb on + strand, within PS417_27100 at 5850.962 kb on + strand at 5850.978 kb on + strand at 5850.978 kb on + strand at 5850.978 kb on + strand at 5850.979 kb on - strand at 5850.979 kb on - strand at 5850.979 kb on - strand at 5850.985 kb on + strand at 5850.986 kb on - strand at 5850.986 kb on - strand at 5851.208 kb on + strand, within PS417_27105 at 5851.288 kb on - strand, within PS417_27105 at 5851.674 kb on - strand, within PS417_27105 at 5851.703 kb on - strand, within PS417_27105 at 5851.703 kb on - strand, within PS417_27105 at 5851.703 kb on - strand, within PS417_27105 at 5851.764 kb on + strand, within PS417_27105 at 5851.765 kb on - strand, within PS417_27105 at 5851.768 kb on + strand, within PS417_27105 at 5851.769 kb on - strand, within PS417_27105 at 5851.825 kb on + strand at 5851.853 kb on - strand at 5851.853 kb on - strand at 5851.856 kb on + strand at 5851.857 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 5,849,276 - PS417_27095 0.25 +0.2 5,849,276 - PS417_27095 0.25 -0.6 5,849,276 - PS417_27095 0.25 -1.4 5,849,334 + PS417_27095 0.31 +0.5 5,849,335 - PS417_27095 0.31 -0.1 5,849,335 - PS417_27095 0.31 -0.2 5,849,487 + PS417_27095 0.47 -0.4 5,849,487 + PS417_27095 0.47 +1.6 5,849,551 - PS417_27095 0.53 +0.1 5,849,783 + PS417_27095 0.77 -0.1 5,849,783 + PS417_27095 0.77 +2.2 5,849,783 + PS417_27095 0.77 +0.4 5,849,783 + PS417_27095 0.77 +0.8 5,849,783 + PS417_27095 0.77 +0.1 5,849,783 + PS417_27095 0.77 +0.1 5,849,784 - PS417_27095 0.77 +0.5 5,849,784 - PS417_27095 0.77 +0.6 5,849,791 - PS417_27095 0.78 -0.1 5,849,791 - PS417_27095 0.78 +1.0 5,849,791 - PS417_27095 0.78 +1.9 5,849,996 - +0.2 5,850,013 + +0.1 5,850,083 + +0.7 5,850,084 - +0.1 5,850,084 - +0.4 5,850,084 - +0.8 5,850,321 + -0.5 5,850,322 - -0.4 5,850,352 - PS417_27100 0.15 -1.0 5,850,414 + PS417_27100 0.24 +1.6 5,850,414 + PS417_27100 0.24 -0.2 5,850,415 - PS417_27100 0.24 -0.3 5,850,432 + PS417_27100 0.27 +0.0 5,850,679 - PS417_27100 0.66 -0.7 5,850,755 + PS417_27100 0.77 -1.1 5,850,755 + PS417_27100 0.77 -0.3 5,850,962 + -0.4 5,850,978 + +0.0 5,850,978 + +0.6 5,850,978 + -0.1 5,850,979 - +0.4 5,850,979 - +0.4 5,850,979 - +2.2 5,850,985 + -1.1 5,850,986 - -0.3 5,850,986 - -0.2 5,851,208 + PS417_27105 0.21 -1.4 5,851,288 - PS417_27105 0.30 +0.1 5,851,674 - PS417_27105 0.74 -0.1 5,851,703 - PS417_27105 0.77 -0.7 5,851,703 - PS417_27105 0.77 -0.3 5,851,703 - PS417_27105 0.77 -0.2 5,851,764 + PS417_27105 0.84 -0.3 5,851,765 - PS417_27105 0.84 -1.5 5,851,768 + PS417_27105 0.84 +0.1 5,851,769 - PS417_27105 0.84 -1.1 5,851,825 + -0.6 5,851,853 - -2.4 5,851,853 - +2.0 5,851,856 + +0.1 5,851,857 - +0.2
Or see this region's nucleotide sequence