Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26625 and PS417_26630 overlap by 38 nucleotides PS417_26630 and PS417_26635 are separated by 61 nucleotides PS417_26635 and PS417_26640 are separated by 330 nucleotides PS417_26640 and PS417_26645 are separated by 274 nucleotides
PS417_26625: PS417_26625 - hypothetical protein, at 5,754,983 to 5,755,417
_26625
PS417_26630: PS417_26630 - transcriptional regulator, at 5,755,380 to 5,756,009
_26630
PS417_26635: PS417_26635 - hypothetical protein, at 5,756,071 to 5,756,310
_26635
PS417_26640: PS417_26640 - hypothetical protein, at 5,756,641 to 5,756,859
_26640
PS417_26645: PS417_26645 - chemotaxis protein, at 5,757,134 to 5,757,589
_26645
Position (kb) 5756
5757 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5755.083 kb on + strand, within PS417_26625 at 5755.083 kb on + strand, within PS417_26625 at 5755.083 kb on + strand, within PS417_26625 at 5755.084 kb on - strand, within PS417_26625 at 5755.092 kb on + strand, within PS417_26625 at 5755.093 kb on - strand, within PS417_26625 at 5755.162 kb on + strand, within PS417_26625 at 5755.162 kb on + strand, within PS417_26625 at 5755.254 kb on + strand, within PS417_26625 at 5755.254 kb on + strand, within PS417_26625 at 5755.254 kb on + strand, within PS417_26625 at 5755.255 kb on - strand, within PS417_26625 at 5755.255 kb on - strand, within PS417_26625 at 5755.255 kb on - strand, within PS417_26625 at 5755.255 kb on - strand, within PS417_26625 at 5755.283 kb on + strand, within PS417_26625 at 5755.403 kb on + strand at 5755.597 kb on + strand, within PS417_26630 at 5755.597 kb on + strand, within PS417_26630 at 5755.597 kb on + strand, within PS417_26630 at 5755.629 kb on + strand, within PS417_26630 at 5755.629 kb on + strand, within PS417_26630 at 5755.629 kb on + strand, within PS417_26630 at 5755.629 kb on + strand, within PS417_26630 at 5755.713 kb on + strand, within PS417_26630 at 5755.713 kb on + strand, within PS417_26630 at 5755.774 kb on + strand, within PS417_26630 at 5755.801 kb on + strand, within PS417_26630 at 5755.802 kb on - strand, within PS417_26630 at 5756.119 kb on + strand, within PS417_26635 at 5756.119 kb on + strand, within PS417_26635 at 5756.119 kb on + strand, within PS417_26635 at 5756.272 kb on + strand, within PS417_26635 at 5756.322 kb on + strand at 5756.408 kb on - strand at 5756.498 kb on - strand at 5756.498 kb on - strand at 5756.642 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.652 kb on + strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.653 kb on - strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.656 kb on + strand at 5756.657 kb on - strand at 5756.657 kb on - strand at 5756.657 kb on - strand at 5756.702 kb on + strand, within PS417_26640 at 5756.702 kb on + strand, within PS417_26640 at 5756.703 kb on - strand, within PS417_26640 at 5756.778 kb on - strand, within PS417_26640 at 5756.778 kb on - strand, within PS417_26640 at 5757.043 kb on - strand at 5757.082 kb on - strand at 5757.125 kb on + strand at 5757.126 kb on - strand at 5757.126 kb on - strand at 5757.135 kb on + strand at 5757.136 kb on - strand at 5757.136 kb on - strand at 5757.136 kb on - strand at 5757.252 kb on + strand, within PS417_26645 at 5757.252 kb on + strand, within PS417_26645
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 5,755,083 + PS417_26625 0.23 -0.1 5,755,083 + PS417_26625 0.23 -0.1 5,755,083 + PS417_26625 0.23 -2.1 5,755,084 - PS417_26625 0.23 -1.5 5,755,092 + PS417_26625 0.25 +0.6 5,755,093 - PS417_26625 0.25 -0.7 5,755,162 + PS417_26625 0.41 -0.4 5,755,162 + PS417_26625 0.41 +0.1 5,755,254 + PS417_26625 0.62 +0.1 5,755,254 + PS417_26625 0.62 +0.2 5,755,254 + PS417_26625 0.62 +1.8 5,755,255 - PS417_26625 0.63 -0.9 5,755,255 - PS417_26625 0.63 +0.7 5,755,255 - PS417_26625 0.63 -0.7 5,755,255 - PS417_26625 0.63 +0.1 5,755,283 + PS417_26625 0.69 -1.4 5,755,403 + +0.0 5,755,597 + PS417_26630 0.34 +0.2 5,755,597 + PS417_26630 0.34 +0.2 5,755,597 + PS417_26630 0.34 +2.3 5,755,629 + PS417_26630 0.40 +0.1 5,755,629 + PS417_26630 0.40 +1.2 5,755,629 + PS417_26630 0.40 +0.4 5,755,629 + PS417_26630 0.40 -0.4 5,755,713 + PS417_26630 0.53 -0.5 5,755,713 + PS417_26630 0.53 +0.6 5,755,774 + PS417_26630 0.63 -0.3 5,755,801 + PS417_26630 0.67 +1.8 5,755,802 - PS417_26630 0.67 -0.4 5,756,119 + PS417_26635 0.20 -1.2 5,756,119 + PS417_26635 0.20 -0.1 5,756,119 + PS417_26635 0.20 -1.1 5,756,272 + PS417_26635 0.84 -0.4 5,756,322 + -0.1 5,756,408 - -0.0 5,756,498 - -0.4 5,756,498 - +0.2 5,756,642 + +1.6 5,756,652 + -0.3 5,756,652 + +1.8 5,756,652 + -0.0 5,756,652 + -0.2 5,756,652 + -0.2 5,756,653 - -0.9 5,756,653 - -0.4 5,756,653 - +0.1 5,756,653 - +0.2 5,756,653 - +0.1 5,756,656 + -0.8 5,756,656 + +0.7 5,756,656 + -0.0 5,756,656 + +0.0 5,756,656 + -0.1 5,756,656 + +0.1 5,756,656 + +0.2 5,756,657 - -1.7 5,756,657 - -0.3 5,756,657 - -0.4 5,756,702 + PS417_26640 0.28 +0.1 5,756,702 + PS417_26640 0.28 +0.1 5,756,703 - PS417_26640 0.28 +0.1 5,756,778 - PS417_26640 0.63 +1.4 5,756,778 - PS417_26640 0.63 +0.0 5,757,043 - +0.2 5,757,082 - +0.4 5,757,125 + +0.1 5,757,126 - -0.4 5,757,126 - -0.1 5,757,135 + -0.0 5,757,136 - +0.4 5,757,136 - -0.2 5,757,136 - -0.6 5,757,252 + PS417_26645 0.26 +0.6 5,757,252 + PS417_26645 0.26 -0.1
Or see this region's nucleotide sequence