Strain Fitness in Pseudomonas simiae WCS417 around PS417_26370
Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,702,008 | - | PS417_26365 | 0.76 | +1.0 | |
5,702,015 | - | PS417_26365 | 0.76 | +0.3 | |
5,702,399 | + | +0.2 | |||
5,702,400 | - | +0.7 | |||
5,702,441 | + | -0.8 | |||
5,702,459 | + | -1.1 | |||
5,702,463 | - | -1.8 | |||
5,702,511 | + | +0.7 | |||
5,702,650 | - | PS417_26370 | 0.15 | -0.8 | |
5,702,841 | - | PS417_26370 | 0.29 | -0.5 | |
5,702,934 | + | PS417_26370 | 0.36 | -0.2 | |
5,703,148 | + | PS417_26370 | 0.51 | -0.6 | |
5,703,149 | - | PS417_26370 | 0.51 | -0.2 | |
5,703,820 | - | -0.8 | |||
5,703,820 | - | +0.9 | |||
5,703,834 | + | -0.3 | |||
5,703,876 | + | -1.2 | |||
5,703,877 | - | -0.2 | |||
5,704,052 | + | PS417_26375 | 0.14 | -0.3 | |
5,704,052 | + | PS417_26375 | 0.14 | -1.2 | |
5,704,052 | + | PS417_26375 | 0.14 | -0.3 | |
5,704,052 | + | -2.2 | |||
5,704,052 | + | PS417_26375 | 0.14 | -0.4 | |
5,704,053 | - | PS417_26375 | 0.14 | -0.1 | |
5,704,053 | - | PS417_26375 | 0.14 | +0.2 | |
5,704,053 | - | PS417_26375 | 0.14 | -0.0 | |
5,704,056 | + | PS417_26375 | 0.14 | +2.8 | |
5,704,057 | - | PS417_26375 | 0.14 | +0.0 | |
5,704,167 | + | PS417_26375 | 0.23 | -0.2 | |
5,704,615 | + | PS417_26375 | 0.61 | +0.4 | |
5,704,616 | - | PS417_26375 | 0.61 | -0.3 | |
5,704,809 | + | PS417_26375 | 0.78 | -0.2 | |
5,704,810 | - | PS417_26375 | 0.78 | -0.4 |
Or see this region's nucleotide sequence