Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22555 and PS417_22565 are separated by 257 nucleotides PS417_22565 and PS417_22570 are separated by 350 nucleotides PS417_22570 and PS417_22575 are separated by 89 nucleotides
PS417_22555: PS417_22555 - chemotaxis protein, at 4,884,154 to 4,886,043
_22555
PS417_22565: PS417_22565 - formyltetrahydrofolate deformylase, at 4,886,301 to 4,887,149
_22565
PS417_22570: PS417_22570 - H-NS histone, at 4,887,500 to 4,887,874
_22570
PS417_22575: PS417_22575 - exonuclease I, at 4,887,964 to 4,889,391
_22575
Position (kb)
4886
4887
4888 Strain fitness (log2 ratio)
-2
-1
0
1 at 4885.512 kb on + strand, within PS417_22555 at 4885.513 kb on - strand at 4885.577 kb on + strand, within PS417_22555 at 4885.578 kb on - strand, within PS417_22555 at 4885.578 kb on - strand, within PS417_22555 at 4886.234 kb on + strand at 4886.235 kb on - strand at 4886.235 kb on - strand at 4886.262 kb on - strand at 4886.489 kb on - strand, within PS417_22565 at 4887.227 kb on + strand at 4887.228 kb on - strand at 4887.258 kb on + strand at 4887.261 kb on + strand at 4887.261 kb on + strand at 4887.283 kb on + strand at 4887.286 kb on - strand at 4887.408 kb on - strand at 4887.411 kb on + strand at 4887.427 kb on + strand at 4887.448 kb on + strand at 4887.449 kb on - strand at 4887.451 kb on + strand at 4887.451 kb on + strand at 4887.483 kb on + strand at 4887.483 kb on + strand at 4887.487 kb on + strand at 4887.488 kb on - strand at 4887.539 kb on - strand, within PS417_22570 at 4887.936 kb on + strand at 4887.937 kb on - strand at 4887.974 kb on - strand at 4887.974 kb on - strand at 4887.998 kb on + strand at 4888.087 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,885,512 + PS417_22555 0.72 +0.4 4,885,513 - -1.4 4,885,577 + PS417_22555 0.75 +0.5 4,885,578 - PS417_22555 0.75 +0.0 4,885,578 - PS417_22555 0.75 +0.5 4,886,234 + +0.1 4,886,235 - -0.2 4,886,235 - +0.4 4,886,262 - -0.1 4,886,489 - PS417_22565 0.22 -0.9 4,887,227 + +0.2 4,887,228 - -0.1 4,887,258 + +0.5 4,887,261 + +1.2 4,887,261 + +0.2 4,887,283 + +1.7 4,887,286 - -0.8 4,887,408 - -0.7 4,887,411 + -0.3 4,887,427 + -0.6 4,887,448 + -0.2 4,887,449 - -0.7 4,887,451 + -0.3 4,887,451 + -0.1 4,887,483 + -0.2 4,887,483 + -1.2 4,887,487 + -0.2 4,887,488 - -2.4 4,887,539 - PS417_22570 0.10 +0.8 4,887,936 + -0.3 4,887,937 - -0.0 4,887,974 - -1.0 4,887,974 - -1.7 4,887,998 + +0.3 4,888,087 - -0.4
Or see this region's nucleotide sequence