Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22180 and PS417_22185 are separated by 139 nucleotides PS417_22185 and PS417_22190 are separated by 207 nucleotides PS417_22190 and PS417_22195 are separated by 127 nucleotides
PS417_22180: PS417_22180 - superoxide dismutase, at 4,804,521 to 4,805,117
_22180
PS417_22185: PS417_22185 - hypothetical protein, at 4,805,257 to 4,805,442
_22185
PS417_22190: PS417_22190 - diguanylate cyclase, at 4,805,650 to 4,807,701
_22190
PS417_22195: PS417_22195 - peptidase, at 4,807,829 to 4,809,172
_22195
Position (kb)
4805
4806
4807
4808 Strain fitness (log2 ratio)
-2
-1
0
1 at 4805.116 kb on - strand at 4805.415 kb on + strand, within PS417_22185 at 4805.483 kb on + strand at 4805.484 kb on - strand at 4805.522 kb on - strand at 4805.614 kb on - strand at 4805.761 kb on + strand at 4806.056 kb on - strand, within PS417_22190 at 4806.094 kb on + strand, within PS417_22190 at 4806.094 kb on + strand, within PS417_22190 at 4806.094 kb on + strand, within PS417_22190 at 4806.095 kb on - strand, within PS417_22190 at 4806.175 kb on + strand, within PS417_22190 at 4806.175 kb on + strand, within PS417_22190 at 4806.175 kb on + strand, within PS417_22190 at 4806.176 kb on - strand, within PS417_22190 at 4806.185 kb on - strand, within PS417_22190 at 4806.264 kb on + strand, within PS417_22190 at 4806.264 kb on + strand, within PS417_22190 at 4806.264 kb on + strand, within PS417_22190 at 4806.265 kb on - strand, within PS417_22190 at 4806.265 kb on - strand, within PS417_22190 at 4806.354 kb on + strand, within PS417_22190 at 4806.880 kb on + strand, within PS417_22190 at 4806.881 kb on - strand, within PS417_22190 at 4806.974 kb on - strand, within PS417_22190 at 4807.320 kb on + strand at 4807.524 kb on + strand at 4807.582 kb on + strand at 4807.583 kb on - strand at 4807.583 kb on - strand at 4807.583 kb on - strand at 4807.583 kb on - strand at 4807.624 kb on + strand at 4807.734 kb on - strand at 4807.837 kb on + strand at 4807.838 kb on - strand at 4808.163 kb on - strand, within PS417_22195 at 4808.163 kb on - strand, within PS417_22195 at 4808.312 kb on - strand, within PS417_22195 at 4808.513 kb on + strand, within PS417_22195 at 4808.646 kb on - strand, within PS417_22195
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,805,116 - -0.4 4,805,415 + PS417_22185 0.85 +0.5 4,805,483 + +0.1 4,805,484 - +0.4 4,805,522 - -0.2 4,805,614 - -1.1 4,805,761 + -0.8 4,806,056 - PS417_22190 0.20 -0.9 4,806,094 + PS417_22190 0.22 -1.4 4,806,094 + PS417_22190 0.22 -0.6 4,806,094 + PS417_22190 0.22 -2.0 4,806,095 - PS417_22190 0.22 -0.9 4,806,175 + PS417_22190 0.26 -0.1 4,806,175 + PS417_22190 0.26 -0.3 4,806,175 + PS417_22190 0.26 -1.7 4,806,176 - PS417_22190 0.26 +0.4 4,806,185 - PS417_22190 0.26 -0.9 4,806,264 + PS417_22190 0.30 +0.7 4,806,264 + PS417_22190 0.30 -0.6 4,806,264 + PS417_22190 0.30 -0.2 4,806,265 - PS417_22190 0.30 -0.4 4,806,265 - PS417_22190 0.30 +0.2 4,806,354 + PS417_22190 0.34 +0.4 4,806,880 + PS417_22190 0.60 -0.1 4,806,881 - PS417_22190 0.60 -0.8 4,806,974 - PS417_22190 0.65 -1.1 4,807,320 + -0.6 4,807,524 + -2.5 4,807,582 + -0.9 4,807,583 - -0.9 4,807,583 - -0.6 4,807,583 - -0.6 4,807,583 - -0.8 4,807,624 + -0.4 4,807,734 - -0.4 4,807,837 + -0.6 4,807,838 - +0.6 4,808,163 - PS417_22195 0.25 +0.7 4,808,163 - PS417_22195 0.25 +0.3 4,808,312 - PS417_22195 0.36 +0.1 4,808,513 + PS417_22195 0.51 +0.7 4,808,646 - PS417_22195 0.61 -0.4
Or see this region's nucleotide sequence