Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21050 and PS417_21055 are separated by 2 nucleotides PS417_21055 and PS417_21060 are separated by 136 nucleotides PS417_21060 and PS417_21065 are separated by 119 nucleotides
PS417_21050: PS417_21050 - serine acetyltransferase, at 4,579,972 to 4,580,964
_21050
PS417_21055: PS417_21055 - threonyl-tRNA synthetase, at 4,580,967 to 4,581,695
_21055
PS417_21060: PS417_21060 - 2-methylcitrate dehydratase, at 4,581,832 to 4,583,316
_21060
PS417_21065: PS417_21065 - 3-methylitaconate isomerase, at 4,583,436 to 4,584,626
_21065
Position (kb)
4581
4582
4583
4584 Strain fitness (log2 ratio)
-2
-1
0
1 at 4581.016 kb on - strand at 4581.077 kb on + strand, within PS417_21055 at 4581.077 kb on + strand, within PS417_21055 at 4581.077 kb on + strand, within PS417_21055 at 4581.241 kb on + strand, within PS417_21055 at 4581.247 kb on + strand, within PS417_21055 at 4581.248 kb on - strand, within PS417_21055 at 4581.801 kb on - strand at 4581.834 kb on - strand at 4582.238 kb on + strand, within PS417_21060 at 4582.238 kb on + strand, within PS417_21060 at 4582.238 kb on + strand, within PS417_21060 at 4582.239 kb on - strand, within PS417_21060 at 4582.239 kb on - strand, within PS417_21060 at 4582.435 kb on + strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.452 kb on - strand, within PS417_21060 at 4582.489 kb on - strand, within PS417_21060 at 4582.542 kb on - strand, within PS417_21060 at 4582.798 kb on + strand, within PS417_21060 at 4582.798 kb on + strand, within PS417_21060 at 4582.798 kb on + strand, within PS417_21060 at 4582.798 kb on + strand, within PS417_21060 at 4582.799 kb on - strand, within PS417_21060 at 4582.799 kb on - strand, within PS417_21060 at 4582.799 kb on - strand, within PS417_21060 at 4582.799 kb on - strand, within PS417_21060 at 4583.012 kb on + strand, within PS417_21060 at 4583.237 kb on + strand at 4583.238 kb on - strand at 4583.250 kb on - strand at 4583.335 kb on - strand at 4583.479 kb on - strand at 4583.479 kb on - strand at 4583.764 kb on + strand, within PS417_21065 at 4583.765 kb on - strand, within PS417_21065
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,581,016 - -0.6 4,581,077 + PS417_21055 0.15 +0.2 4,581,077 + PS417_21055 0.15 +0.5 4,581,077 + PS417_21055 0.15 +0.1 4,581,241 + PS417_21055 0.38 +0.6 4,581,247 + PS417_21055 0.38 +0.5 4,581,248 - PS417_21055 0.39 -1.0 4,581,801 - +0.8 4,581,834 - -0.0 4,582,238 + PS417_21060 0.27 -0.3 4,582,238 + PS417_21060 0.27 -1.6 4,582,238 + PS417_21060 0.27 -1.0 4,582,239 - PS417_21060 0.27 +1.6 4,582,239 - PS417_21060 0.27 +0.6 4,582,435 + PS417_21060 0.41 -1.0 4,582,452 - PS417_21060 0.42 +0.0 4,582,452 - PS417_21060 0.42 +0.1 4,582,452 - PS417_21060 0.42 -1.4 4,582,452 - PS417_21060 0.42 -0.1 4,582,452 - PS417_21060 0.42 +0.3 4,582,489 - PS417_21060 0.44 -0.4 4,582,542 - PS417_21060 0.48 -0.4 4,582,798 + PS417_21060 0.65 -0.6 4,582,798 + PS417_21060 0.65 -0.2 4,582,798 + PS417_21060 0.65 -1.4 4,582,798 + PS417_21060 0.65 +0.4 4,582,799 - PS417_21060 0.65 -0.1 4,582,799 - PS417_21060 0.65 -0.4 4,582,799 - PS417_21060 0.65 +0.1 4,582,799 - PS417_21060 0.65 -1.8 4,583,012 + PS417_21060 0.79 -0.7 4,583,237 + +0.3 4,583,238 - +0.1 4,583,250 - -0.4 4,583,335 - +0.5 4,583,479 - -1.0 4,583,479 - -0.1 4,583,764 + PS417_21065 0.28 +0.4 4,583,765 - PS417_21065 0.28 -0.8
Or see this region's nucleotide sequence