Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21005 and PS417_21010 are separated by 13 nucleotides PS417_21010 and PS417_21015 are separated by 188 nucleotides PS417_21015 and PS417_21020 are separated by 106 nucleotides
PS417_21005: PS417_21005 - CmaX protein, at 4,568,365 to 4,569,360
_21005
PS417_21010: PS417_21010 - ribonuclease activity regulator protein RraA, at 4,569,374 to 4,569,865
_21010
PS417_21015: PS417_21015 - EstX protein, at 4,570,054 to 4,571,043
_21015
PS417_21020: PS417_21020 - phosphoenolpyruvate synthase, at 4,571,150 to 4,573,525
_21020
Position (kb)
4570
4571
4572 Strain fitness (log2 ratio)
-1
0
1
2 at 4569.303 kb on + strand at 4569.375 kb on + strand at 4569.375 kb on + strand at 4569.429 kb on + strand, within PS417_21010 at 4569.429 kb on + strand, within PS417_21010 at 4569.435 kb on + strand, within PS417_21010 at 4569.436 kb on - strand, within PS417_21010 at 4569.436 kb on - strand, within PS417_21010 at 4569.436 kb on - strand, within PS417_21010 at 4569.436 kb on - strand, within PS417_21010 at 4569.536 kb on + strand, within PS417_21010 at 4569.731 kb on - strand, within PS417_21010 at 4569.855 kb on + strand at 4569.856 kb on - strand at 4570.003 kb on + strand at 4570.004 kb on - strand at 4570.220 kb on + strand, within PS417_21015 at 4570.393 kb on - strand, within PS417_21015 at 4570.393 kb on - strand, within PS417_21015 at 4570.700 kb on + strand at 4570.800 kb on - strand, within PS417_21015 at 4571.098 kb on + strand at 4571.295 kb on + strand at 4571.295 kb on + strand at 4571.296 kb on - strand at 4571.587 kb on + strand, within PS417_21020 at 4571.698 kb on - strand, within PS417_21020 at 4571.748 kb on + strand, within PS417_21020 at 4571.748 kb on + strand, within PS417_21020 at 4571.748 kb on + strand, within PS417_21020 at 4571.871 kb on + strand, within PS417_21020 at 4571.872 kb on - strand, within PS417_21020 at 4571.946 kb on + strand, within PS417_21020 at 4571.946 kb on + strand, within PS417_21020 at 4571.946 kb on + strand, within PS417_21020 at 4571.946 kb on + strand, within PS417_21020
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,569,303 + -0.2 4,569,375 + -0.1 4,569,375 + +1.0 4,569,429 + PS417_21010 0.11 -0.9 4,569,429 + PS417_21010 0.11 +0.0 4,569,435 + PS417_21010 0.12 -1.1 4,569,436 - PS417_21010 0.13 +0.3 4,569,436 - PS417_21010 0.13 -0.2 4,569,436 - PS417_21010 0.13 -0.0 4,569,436 - PS417_21010 0.13 +0.3 4,569,536 + PS417_21010 0.33 -0.2 4,569,731 - PS417_21010 0.73 -0.2 4,569,855 + +2.0 4,569,856 - -0.1 4,570,003 + +0.7 4,570,004 - +0.0 4,570,220 + PS417_21015 0.17 -0.1 4,570,393 - PS417_21015 0.34 -0.2 4,570,393 - PS417_21015 0.34 -1.5 4,570,700 + -1.5 4,570,800 - PS417_21015 0.75 -0.7 4,571,098 + +0.8 4,571,295 + +0.5 4,571,295 + -0.1 4,571,296 - +1.0 4,571,587 + PS417_21020 0.18 -0.2 4,571,698 - PS417_21020 0.23 -1.6 4,571,748 + PS417_21020 0.25 -0.7 4,571,748 + PS417_21020 0.25 +0.0 4,571,748 + PS417_21020 0.25 -0.3 4,571,871 + PS417_21020 0.30 -0.1 4,571,872 - PS417_21020 0.30 +0.3 4,571,946 + PS417_21020 0.34 +0.1 4,571,946 + PS417_21020 0.34 +0.5 4,571,946 + PS417_21020 0.34 +1.2 4,571,946 + PS417_21020 0.34 -0.3
Or see this region's nucleotide sequence