Strain Fitness in Pseudomonas simiae WCS417 around PS417_20755

Experiment: Bacitracin 2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPS417_20750 and PS417_20755 are separated by 16 nucleotidesPS417_20755 and PS417_20760 are separated by 115 nucleotides PS417_20750: PS417_20750 - (Fe-S)-binding protein, at 4,508,020 to 4,509,447 _20750 PS417_20755: PS417_20755 - membrane protein, at 4,509,464 to 4,510,003 _20755 PS417_20760: PS417_20760 - carbonate dehydratase, at 4,510,119 to 4,512,569 _20760 Position (kb) 4509 4510 4511Strain fitness (log2 ratio) -1 0 1at 4509.608 kb on + strand, within PS417_20755at 4509.608 kb on + strand, within PS417_20755at 4509.608 kb on + strand, within PS417_20755at 4509.608 kb on + strand, within PS417_20755at 4509.611 kb on + strand, within PS417_20755at 4510.140 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml
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4,509,608 + PS417_20755 0.27 -1.6
4,509,608 + PS417_20755 0.27 -0.3
4,509,608 + PS417_20755 0.27 -0.5
4,509,608 + PS417_20755 0.27 -0.3
4,509,611 + PS417_20755 0.27 -0.3
4,510,140 + -0.5

Or see this region's nucleotide sequence