Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19615 and PS417_19620 are separated by 539 nucleotides PS417_19620 and PS417_19625 are separated by 369 nucleotides
PS417_19615: PS417_19615 - chemotaxis protein CheW, at 4,265,959 to 4,266,894
_19615
PS417_19620: PS417_19620 - hypothetical protein, at 4,267,434 to 4,267,883
_19620
PS417_19625: PS417_19625 - histidine kinase, at 4,268,253 to 4,269,143
_19625
Position (kb)
4267
4268 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4266.500 kb on + strand, within PS417_19615 at 4266.500 kb on + strand, within PS417_19615 at 4266.501 kb on - strand, within PS417_19615 at 4266.606 kb on - strand, within PS417_19615 at 4266.619 kb on - strand, within PS417_19615 at 4266.871 kb on + strand at 4266.976 kb on - strand at 4266.976 kb on - strand at 4266.986 kb on + strand at 4266.988 kb on - strand at 4267.020 kb on + strand at 4267.094 kb on + strand at 4267.094 kb on + strand at 4267.094 kb on + strand at 4267.140 kb on + strand at 4267.144 kb on + strand at 4267.144 kb on + strand at 4267.144 kb on + strand at 4267.144 kb on + strand at 4267.144 kb on + strand at 4267.145 kb on - strand at 4267.233 kb on - strand at 4267.311 kb on + strand at 4267.312 kb on - strand at 4267.360 kb on + strand at 4267.377 kb on + strand at 4267.377 kb on + strand at 4267.378 kb on - strand at 4267.416 kb on + strand at 4267.416 kb on + strand at 4267.416 kb on + strand at 4267.416 kb on + strand at 4267.417 kb on - strand at 4267.417 kb on - strand at 4267.433 kb on + strand at 4267.433 kb on + strand at 4267.653 kb on + strand, within PS417_19620 at 4267.654 kb on - strand, within PS417_19620 at 4267.812 kb on - strand, within PS417_19620 at 4267.848 kb on + strand at 4267.889 kb on + strand at 4267.890 kb on - strand at 4267.890 kb on - strand at 4267.914 kb on + strand at 4267.914 kb on + strand at 4267.915 kb on - strand at 4268.018 kb on - strand at 4268.072 kb on + strand at 4268.072 kb on + strand at 4268.075 kb on + strand at 4268.115 kb on - strand at 4268.123 kb on + strand at 4268.124 kb on - strand at 4268.127 kb on - strand at 4268.162 kb on + strand at 4268.178 kb on - strand at 4268.253 kb on - strand at 4268.256 kb on + strand at 4268.256 kb on + strand at 4268.256 kb on + strand at 4268.257 kb on - strand at 4268.257 kb on - strand at 4268.257 kb on - strand at 4268.257 kb on - strand at 4268.257 kb on - strand at 4268.257 kb on - strand at 4268.257 kb on - strand at 4268.611 kb on + strand, within PS417_19625 at 4268.611 kb on + strand, within PS417_19625
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 4,266,500 + PS417_19615 0.58 -0.2 4,266,500 + PS417_19615 0.58 -1.2 4,266,501 - PS417_19615 0.58 +0.0 4,266,606 - PS417_19615 0.69 +0.1 4,266,619 - PS417_19615 0.71 -0.8 4,266,871 + -0.2 4,266,976 - -0.2 4,266,976 - +0.5 4,266,986 + -0.2 4,266,988 - -0.8 4,267,020 + -0.6 4,267,094 + -0.2 4,267,094 + +0.8 4,267,094 + -0.6 4,267,140 + -0.6 4,267,144 + -0.3 4,267,144 + +0.2 4,267,144 + +0.5 4,267,144 + -0.9 4,267,144 + -1.8 4,267,145 - -0.4 4,267,233 - +1.8 4,267,311 + -0.5 4,267,312 - -0.1 4,267,360 + +0.4 4,267,377 + +0.4 4,267,377 + +0.4 4,267,378 - -0.6 4,267,416 + +0.6 4,267,416 + +2.8 4,267,416 + +0.5 4,267,416 + +0.0 4,267,417 - -0.3 4,267,417 - -2.2 4,267,433 + -0.1 4,267,433 + +0.1 4,267,653 + PS417_19620 0.49 -0.9 4,267,654 - PS417_19620 0.49 -0.8 4,267,812 - PS417_19620 0.84 -0.4 4,267,848 + +1.1 4,267,889 + +1.3 4,267,890 - -2.0 4,267,890 - +0.1 4,267,914 + +0.3 4,267,914 + +1.1 4,267,915 - -0.6 4,268,018 - -1.2 4,268,072 + +0.8 4,268,072 + +0.6 4,268,075 + +0.6 4,268,115 - -0.7 4,268,123 + +0.3 4,268,124 - +0.7 4,268,127 - -1.8 4,268,162 + +0.8 4,268,178 - -1.0 4,268,253 - +0.2 4,268,256 + -0.9 4,268,256 + +0.2 4,268,256 + -0.8 4,268,257 - -0.6 4,268,257 - +0.4 4,268,257 - -0.8 4,268,257 - -1.6 4,268,257 - -1.0 4,268,257 - +0.6 4,268,257 - -1.0 4,268,611 + PS417_19625 0.40 -1.4 4,268,611 + PS417_19625 0.40 -0.6
Or see this region's nucleotide sequence