Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13170 and PS417_13175 are separated by 10 nucleotides PS417_13175 and PS417_13180 are separated by 167 nucleotides
PS417_13170: PS417_13170 - multidrug DMT transporter permease, at 2,877,348 to 2,878,550
_13170
PS417_13175: PS417_13175 - iron transporter, at 2,878,561 to 2,879,394
_13175
PS417_13180: PS417_13180 - AraC family transcriptional regulator, at 2,879,562 to 2,880,587
_13180
Position (kb)
2878
2879
2880 Strain fitness (log2 ratio)
-1
0
1
2 at 2877.637 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.666 kb on + strand, within PS417_13170 at 2877.667 kb on - strand, within PS417_13170 at 2877.827 kb on - strand, within PS417_13170 at 2877.971 kb on - strand, within PS417_13170 at 2878.063 kb on + strand, within PS417_13170 at 2878.199 kb on - strand, within PS417_13170 at 2878.450 kb on + strand at 2878.451 kb on - strand at 2878.538 kb on + strand at 2878.634 kb on + strand at 2878.643 kb on + strand at 2878.889 kb on + strand, within PS417_13175 at 2878.890 kb on - strand, within PS417_13175 at 2878.890 kb on - strand, within PS417_13175 at 2879.321 kb on + strand at 2879.413 kb on + strand at 2879.414 kb on - strand at 2879.418 kb on - strand at 2879.418 kb on - strand at 2879.418 kb on - strand at 2879.425 kb on + strand at 2879.609 kb on - strand at 2880.033 kb on - strand, within PS417_13180 at 2880.033 kb on - strand, within PS417_13180 at 2880.225 kb on - strand, within PS417_13180
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 2,877,637 + PS417_13170 0.24 -0.3 2,877,666 + PS417_13170 0.26 +0.7 2,877,666 + PS417_13170 0.26 -0.7 2,877,666 + PS417_13170 0.26 -1.1 2,877,666 + PS417_13170 0.26 +0.3 2,877,667 - PS417_13170 0.27 -0.2 2,877,827 - PS417_13170 0.40 +1.6 2,877,971 - PS417_13170 0.52 -1.6 2,878,063 + PS417_13170 0.59 +0.5 2,878,199 - PS417_13170 0.71 -1.0 2,878,450 + +0.0 2,878,451 - -0.7 2,878,538 + +0.1 2,878,634 + -0.1 2,878,643 + -0.5 2,878,889 + PS417_13175 0.39 -1.0 2,878,890 - PS417_13175 0.39 -0.5 2,878,890 - PS417_13175 0.39 -0.7 2,879,321 + -0.3 2,879,413 + +0.3 2,879,414 - -0.6 2,879,418 - +2.2 2,879,418 - -1.2 2,879,418 - +0.4 2,879,425 + +0.1 2,879,609 - +0.6 2,880,033 - PS417_13180 0.46 -0.2 2,880,033 - PS417_13180 0.46 -0.2 2,880,225 - PS417_13180 0.65 +0.0
Or see this region's nucleotide sequence