Strain Fitness in Pseudomonas simiae WCS417 around PS417_10305
Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,203,743 | + | +0.1 | |||
2,203,903 | - | PS417_10300 | 0.54 | +0.1 | |
2,203,957 | + | PS417_10300 | 0.58 | +0.1 | |
2,203,959 | + | +0.7 | |||
2,203,986 | + | PS417_10300 | 0.60 | -0.5 | |
2,203,987 | - | PS417_10300 | 0.60 | +0.4 | |
2,204,072 | + | PS417_10300 | 0.66 | +0.4 | |
2,204,073 | - | PS417_10300 | 0.67 | +0.1 | |
2,204,624 | - | -1.6 | |||
2,204,680 | + | -2.9 | |||
2,204,680 | + | +0.7 | |||
2,204,680 | + | -0.8 | |||
2,204,681 | - | -0.4 | |||
2,204,681 | - | +2.3 | |||
2,204,756 | - | -0.3 | |||
2,204,840 | - | PS417_10305 | 0.39 | -2.0 | |
2,204,926 | + | PS417_10305 | 0.72 | -0.8 | |
2,204,963 | - | PS417_10305 | 0.86 | -0.5 | |
2,205,291 | + | -0.3 | |||
2,205,338 | - | -0.2 | |||
2,205,471 | + | PS417_10315 | 0.15 | -0.3 | |
2,205,472 | - | PS417_10315 | 0.15 | +0.2 | |
2,205,481 | + | PS417_10315 | 0.16 | -0.9 | |
2,205,924 | + | PS417_10315 | 0.53 | -0.2 |
Or see this region's nucleotide sequence