Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07545 and PS417_07550 are separated by 91 nucleotides PS417_07550 and PS417_07555 are separated by 213 nucleotides
PS417_07545: PS417_07545 - ABC transporter ATP-binding protein, at 1,658,905 to 1,660,680
_07545
PS417_07550: PS417_07550 - lytic transglycosylase, at 1,660,772 to 1,662,700
_07550
PS417_07555: PS417_07555 - ABC transporter ATPase, at 1,662,914 to 1,664,833
_07555
Position (kb)
1660
1661
1662
1663 Strain fitness (log2 ratio)
-1
0
1
2 at 1659.979 kb on + strand, within PS417_07545 at 1659.980 kb on - strand, within PS417_07545 at 1659.980 kb on - strand, within PS417_07545 at 1659.980 kb on - strand, within PS417_07545 at 1660.087 kb on + strand, within PS417_07545 at 1660.087 kb on + strand, within PS417_07545 at 1660.622 kb on - strand at 1660.728 kb on + strand at 1660.729 kb on - strand at 1660.773 kb on + strand at 1660.774 kb on - strand at 1660.851 kb on + strand at 1660.873 kb on - strand at 1661.341 kb on - strand, within PS417_07550 at 1661.341 kb on - strand, within PS417_07550 at 1661.451 kb on + strand, within PS417_07550 at 1661.452 kb on - strand, within PS417_07550 at 1661.452 kb on - strand, within PS417_07550 at 1661.472 kb on - strand, within PS417_07550 at 1661.472 kb on - strand, within PS417_07550 at 1661.485 kb on + strand, within PS417_07550 at 1661.803 kb on - strand, within PS417_07550 at 1662.121 kb on - strand, within PS417_07550 at 1662.264 kb on + strand, within PS417_07550 at 1662.264 kb on + strand, within PS417_07550 at 1662.346 kb on - strand, within PS417_07550 at 1662.502 kb on - strand, within PS417_07550 at 1662.502 kb on - strand, within PS417_07550 at 1662.510 kb on + strand at 1662.510 kb on + strand at 1662.510 kb on + strand at 1662.511 kb on - strand at 1662.547 kb on - strand at 1662.555 kb on + strand at 1662.555 kb on + strand at 1662.556 kb on - strand at 1662.556 kb on - strand at 1662.556 kb on - strand at 1662.600 kb on + strand at 1662.600 kb on + strand at 1662.603 kb on + strand at 1662.728 kb on + strand at 1662.729 kb on - strand at 1662.760 kb on - strand at 1662.760 kb on - strand at 1662.875 kb on - strand at 1662.875 kb on - strand at 1662.883 kb on + strand at 1662.913 kb on + strand at 1662.914 kb on - strand at 1663.092 kb on + strand at 1663.215 kb on - strand, within PS417_07555 at 1663.633 kb on - strand, within PS417_07555
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 2 mg/ml remove 1,659,979 + PS417_07545 0.60 +0.3 1,659,980 - PS417_07545 0.61 -0.2 1,659,980 - PS417_07545 0.61 +0.4 1,659,980 - PS417_07545 0.61 +0.0 1,660,087 + PS417_07545 0.67 -0.4 1,660,087 + PS417_07545 0.67 +0.3 1,660,622 - +2.4 1,660,728 + -0.2 1,660,729 - +0.0 1,660,773 + -0.4 1,660,774 - -0.7 1,660,851 + -1.5 1,660,873 - +0.8 1,661,341 - PS417_07550 0.29 +0.2 1,661,341 - PS417_07550 0.29 -0.3 1,661,451 + PS417_07550 0.35 -0.6 1,661,452 - PS417_07550 0.35 -0.5 1,661,452 - PS417_07550 0.35 -0.1 1,661,472 - PS417_07550 0.36 +1.4 1,661,472 - PS417_07550 0.36 -0.7 1,661,485 + PS417_07550 0.37 -0.4 1,661,803 - PS417_07550 0.53 +0.6 1,662,121 - PS417_07550 0.70 +0.2 1,662,264 + PS417_07550 0.77 -0.2 1,662,264 + PS417_07550 0.77 +0.0 1,662,346 - PS417_07550 0.82 -0.1 1,662,502 - PS417_07550 0.90 -0.1 1,662,502 - PS417_07550 0.90 -0.6 1,662,510 + -0.3 1,662,510 + -0.1 1,662,510 + +0.4 1,662,511 - +0.1 1,662,547 - +0.1 1,662,555 + +0.4 1,662,555 + -0.1 1,662,556 - -1.1 1,662,556 - +0.2 1,662,556 - +0.1 1,662,600 + -0.5 1,662,600 + -0.3 1,662,603 + +0.3 1,662,728 + +0.1 1,662,729 - +0.2 1,662,760 - -0.3 1,662,760 - +0.5 1,662,875 - -0.6 1,662,875 - +0.2 1,662,883 + +0.9 1,662,913 + +0.9 1,662,914 - -0.8 1,663,092 + +0.9 1,663,215 - PS417_07555 0.16 -0.9 1,663,633 - PS417_07555 0.37 +0.1
Or see this region's nucleotide sequence