Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27855 and PS417_27860 overlap by 4 nucleotides PS417_27860 and PS417_27865 are separated by 221 nucleotides PS417_27865 and PS417_27870 are separated by 8 nucleotides
PS417_27855: PS417_27855 - biopolymer transporter ExbD, at 6,004,546 to 6,004,971
_27855
PS417_27860: PS417_27860 - energy transducer TonB, at 6,004,968 to 6,005,717
_27860
PS417_27865: PS417_27865 - LysR family transcriptional regulator, at 6,005,939 to 6,006,859
_27865
PS417_27870: PS417_27870 - ATP-dependent DNA helicase RecG, at 6,006,868 to 6,008,943
_27870
Position (kb)
6005
6006
6007 Strain fitness (log2 ratio)
-2
-1
0
1 at 6005.740 kb on + strand at 6005.741 kb on - strand at 6005.938 kb on + strand at 6005.955 kb on + strand at 6005.956 kb on - strand at 6005.956 kb on - strand at 6006.305 kb on + strand, within PS417_27865 at 6006.305 kb on + strand, within PS417_27865 at 6006.306 kb on - strand, within PS417_27865 at 6006.306 kb on - strand, within PS417_27865 at 6006.857 kb on + strand at 6006.857 kb on + strand at 6006.857 kb on + strand at 6007.246 kb on + strand, within PS417_27870 at 6007.247 kb on - strand, within PS417_27870
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 6,005,740 + +0.0 6,005,741 - -0.1 6,005,938 + -0.4 6,005,955 + -0.4 6,005,956 - -0.6 6,005,956 - -1.1 6,006,305 + PS417_27865 0.40 -0.6 6,006,305 + PS417_27865 0.40 -0.4 6,006,306 - PS417_27865 0.40 -2.1 6,006,306 - PS417_27865 0.40 -0.8 6,006,857 + +0.6 6,006,857 + +0.4 6,006,857 + +0.2 6,007,246 + PS417_27870 0.18 -0.6 6,007,247 - PS417_27870 0.18 -0.5
Or see this region's nucleotide sequence