Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18450 and PS417_18455 are separated by 111 nucleotides PS417_18455 and PS417_18460 are separated by 42 nucleotides PS417_18460 and PS417_18465 overlap by 4 nucleotides
PS417_18450: PS417_18450 - hydrolase, at 4,013,037 to 4,013,807
_18450
PS417_18455: PS417_18455 - hypothetical protein, at 4,013,919 to 4,014,164
_18455
PS417_18460: PS417_18460 - transcriptional regulator, at 4,014,207 to 4,014,878
_18460
PS417_18465: PS417_18465 - histidine kinase, at 4,014,875 to 4,016,275
_18465
Position (kb)
4013
4014
4015 Strain fitness (log2 ratio)
-2
-1
0
1 at 4012.970 kb on + strand at 4012.970 kb on + strand at 4013.014 kb on + strand at 4013.383 kb on - strand, within PS417_18450 at 4013.440 kb on - strand, within PS417_18450 at 4013.518 kb on - strand, within PS417_18450 at 4013.518 kb on - strand, within PS417_18450 at 4013.559 kb on + strand at 4013.559 kb on + strand, within PS417_18450 at 4013.559 kb on + strand, within PS417_18450 at 4013.560 kb on - strand, within PS417_18450 at 4013.805 kb on + strand at 4013.806 kb on - strand at 4013.817 kb on + strand at 4013.817 kb on + strand at 4013.931 kb on - strand at 4014.054 kb on + strand, within PS417_18455 at 4014.055 kb on - strand, within PS417_18455 at 4014.090 kb on + strand, within PS417_18455 at 4014.220 kb on + strand at 4014.249 kb on + strand at 4014.279 kb on + strand, within PS417_18460 at 4014.465 kb on - strand, within PS417_18460 at 4014.660 kb on - strand, within PS417_18460 at 4014.894 kb on - strand at 4015.022 kb on + strand, within PS417_18465
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 4,012,970 + -0.4 4,012,970 + -0.0 4,013,014 + -0.7 4,013,383 - PS417_18450 0.45 +0.7 4,013,440 - PS417_18450 0.52 -0.4 4,013,518 - PS417_18450 0.62 -0.2 4,013,518 - PS417_18450 0.62 +0.1 4,013,559 + -1.9 4,013,559 + PS417_18450 0.68 -0.2 4,013,559 + PS417_18450 0.68 +0.0 4,013,560 - PS417_18450 0.68 -0.5 4,013,805 + -0.4 4,013,806 - +0.3 4,013,817 + -0.1 4,013,817 + -1.0 4,013,931 - -0.1 4,014,054 + PS417_18455 0.55 -1.3 4,014,055 - PS417_18455 0.55 -0.4 4,014,090 + PS417_18455 0.70 -1.1 4,014,220 + -0.1 4,014,249 + +0.7 4,014,279 + PS417_18460 0.11 +0.5 4,014,465 - PS417_18460 0.38 -0.1 4,014,660 - PS417_18460 0.67 -0.1 4,014,894 - -0.2 4,015,022 + PS417_18465 0.10 +0.2
Or see this region's nucleotide sequence