Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17790 and PS417_17795 overlap by 1 nucleotides PS417_17795 and PS417_17800 are separated by 8 nucleotides
PS417_17790: PS417_17790 - ABC transporter, at 3,884,570 to 3,885,283
_17790
PS417_17795: PS417_17795 - ABC transporter permease, at 3,885,283 to 3,886,026
_17795
PS417_17800: PS417_17800 - microcin B17-processing protein McbD, at 3,886,035 to 3,887,228
_17800
Position (kb)
3885
3886
3887 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3884.322 kb on + strand at 3884.322 kb on + strand at 3884.397 kb on - strand at 3884.558 kb on + strand at 3884.559 kb on - strand at 3884.600 kb on - strand at 3884.618 kb on - strand at 3884.618 kb on - strand at 3884.628 kb on + strand at 3884.629 kb on - strand at 3884.688 kb on + strand, within PS417_17790 at 3884.688 kb on + strand, within PS417_17790 at 3884.688 kb on + strand, within PS417_17790 at 3884.688 kb on + strand at 3884.689 kb on - strand, within PS417_17790 at 3884.832 kb on - strand, within PS417_17790 at 3884.893 kb on - strand, within PS417_17790 at 3885.047 kb on + strand, within PS417_17790 at 3885.048 kb on - strand, within PS417_17790 at 3885.192 kb on - strand, within PS417_17790 at 3885.223 kb on + strand at 3885.224 kb on - strand at 3885.573 kb on + strand, within PS417_17795 at 3885.735 kb on + strand, within PS417_17795 at 3885.853 kb on - strand, within PS417_17795 at 3886.322 kb on - strand, within PS417_17800 at 3886.460 kb on + strand, within PS417_17800 at 3886.531 kb on - strand, within PS417_17800 at 3886.612 kb on + strand, within PS417_17800 at 3886.825 kb on + strand, within PS417_17800 at 3886.826 kb on - strand, within PS417_17800 at 3886.841 kb on + strand at 3886.866 kb on - strand, within PS417_17800 at 3886.908 kb on - strand, within PS417_17800 at 3886.910 kb on - strand, within PS417_17800
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 3,884,322 + -0.4 3,884,322 + -0.6 3,884,397 - +0.4 3,884,558 + +0.2 3,884,559 - -0.4 3,884,600 - -0.2 3,884,618 - +0.8 3,884,618 - +0.2 3,884,628 + +0.6 3,884,629 - +0.9 3,884,688 + PS417_17790 0.17 -0.4 3,884,688 + PS417_17790 0.17 +0.2 3,884,688 + PS417_17790 0.17 +0.8 3,884,688 + +2.0 3,884,689 - PS417_17790 0.17 +0.8 3,884,832 - PS417_17790 0.37 -0.3 3,884,893 - PS417_17790 0.45 +0.0 3,885,047 + PS417_17790 0.67 -1.5 3,885,048 - PS417_17790 0.67 +0.4 3,885,192 - PS417_17790 0.87 -0.6 3,885,223 + -1.6 3,885,224 - +0.0 3,885,573 + PS417_17795 0.39 -2.2 3,885,735 + PS417_17795 0.61 +0.0 3,885,853 - PS417_17795 0.77 +0.1 3,886,322 - PS417_17800 0.24 -0.0 3,886,460 + PS417_17800 0.36 +0.1 3,886,531 - PS417_17800 0.42 +0.2 3,886,612 + PS417_17800 0.48 +0.2 3,886,825 + PS417_17800 0.66 +0.2 3,886,826 - PS417_17800 0.66 +0.4 3,886,841 + -0.2 3,886,866 - PS417_17800 0.70 -0.2 3,886,908 - PS417_17800 0.73 -0.2 3,886,910 - PS417_17800 0.73 -0.5
Or see this region's nucleotide sequence