Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01480 and PS417_01485 overlap by 20 nucleotides PS417_01485 and PS417_01490 are separated by 38 nucleotides PS417_01490 and PS417_01495 are separated by 74 nucleotides PS417_01495 and PS417_01500 are separated by 13 nucleotides
PS417_01480: PS417_01480 - SAM-dependent methyltransferase, at 328,947 to 330,134
_01480
PS417_01485: PS417_01485 - ABC transporter permease, at 330,115 to 330,804
_01485
PS417_01490: PS417_01490 - ABC transporter permease, at 330,843 to 331,538
_01490
PS417_01495: PS417_01495 - amino acid ABC transporter, at 331,613 to 332,365
_01495
PS417_01500: PS417_01500 - amino acid transporter, at 332,379 to 333,152
_01500
Position (kb) 330
331
332 Strain fitness (log2 ratio) -1
0
1 at 329.879 kb on + strand, within PS417_01480 at 329.879 kb on + strand, within PS417_01480 at 330.033 kb on + strand at 330.033 kb on + strand at 330.172 kb on + strand at 330.182 kb on + strand at 330.182 kb on + strand at 330.198 kb on - strand, within PS417_01485 at 330.198 kb on - strand, within PS417_01485 at 330.236 kb on + strand, within PS417_01485 at 330.241 kb on - strand, within PS417_01485 at 330.380 kb on + strand, within PS417_01485 at 330.380 kb on + strand, within PS417_01485 at 330.380 kb on + strand, within PS417_01485 at 330.381 kb on - strand, within PS417_01485 at 330.381 kb on - strand, within PS417_01485 at 330.480 kb on - strand, within PS417_01485 at 330.584 kb on + strand, within PS417_01485 at 330.588 kb on - strand, within PS417_01485 at 330.639 kb on - strand, within PS417_01485 at 330.644 kb on + strand, within PS417_01485 at 330.645 kb on - strand, within PS417_01485 at 330.662 kb on + strand, within PS417_01485 at 330.663 kb on - strand, within PS417_01485 at 330.663 kb on - strand, within PS417_01485 at 330.833 kb on + strand at 331.324 kb on + strand, within PS417_01490 at 331.324 kb on + strand, within PS417_01490 at 331.356 kb on - strand, within PS417_01490 at 331.375 kb on + strand, within PS417_01490 at 331.405 kb on + strand, within PS417_01490 at 331.406 kb on - strand, within PS417_01490 at 331.441 kb on - strand, within PS417_01490 at 331.635 kb on + strand at 331.635 kb on + strand at 331.635 kb on + strand at 331.636 kb on - strand at 331.636 kb on - strand at 331.656 kb on + strand at 331.656 kb on + strand at 331.657 kb on - strand at 331.752 kb on - strand, within PS417_01495 at 331.809 kb on + strand, within PS417_01495 at 331.818 kb on + strand, within PS417_01495 at 331.818 kb on + strand, within PS417_01495 at 331.818 kb on + strand, within PS417_01495 at 331.818 kb on + strand, within PS417_01495 at 331.819 kb on - strand, within PS417_01495 at 331.819 kb on - strand, within PS417_01495 at 331.819 kb on - strand, within PS417_01495 at 331.926 kb on + strand, within PS417_01495 at 331.926 kb on + strand, within PS417_01495 at 331.927 kb on - strand at 331.927 kb on - strand, within PS417_01495 at 332.041 kb on - strand, within PS417_01495 at 332.041 kb on - strand, within PS417_01495 at 332.160 kb on + strand, within PS417_01495 at 332.160 kb on + strand, within PS417_01495 at 332.160 kb on + strand, within PS417_01495 at 332.160 kb on + strand, within PS417_01495 at 332.160 kb on + strand, within PS417_01495 at 332.161 kb on - strand, within PS417_01495 at 332.161 kb on - strand, within PS417_01495 at 332.161 kb on - strand, within PS417_01495 at 332.161 kb on - strand, within PS417_01495 at 332.488 kb on + strand, within PS417_01500
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 329,879 + PS417_01480 0.78 +0.3 329,879 + PS417_01480 0.78 +0.0 330,033 + -0.3 330,033 + +0.0 330,172 + +1.1 330,182 + +0.3 330,182 + -0.1 330,198 - PS417_01485 0.12 -0.0 330,198 - PS417_01485 0.12 +0.5 330,236 + PS417_01485 0.18 -0.5 330,241 - PS417_01485 0.18 -0.4 330,380 + PS417_01485 0.38 -1.2 330,380 + PS417_01485 0.38 +1.3 330,380 + PS417_01485 0.38 -0.4 330,381 - PS417_01485 0.39 +1.5 330,381 - PS417_01485 0.39 +0.2 330,480 - PS417_01485 0.53 -0.5 330,584 + PS417_01485 0.68 -0.1 330,588 - PS417_01485 0.69 +0.1 330,639 - PS417_01485 0.76 +0.4 330,644 + PS417_01485 0.77 +0.6 330,645 - PS417_01485 0.77 -0.1 330,662 + PS417_01485 0.79 -0.1 330,663 - PS417_01485 0.79 +0.1 330,663 - PS417_01485 0.79 -0.2 330,833 + -0.2 331,324 + PS417_01490 0.69 +1.5 331,324 + PS417_01490 0.69 +0.2 331,356 - PS417_01490 0.74 +0.3 331,375 + PS417_01490 0.76 +0.0 331,405 + PS417_01490 0.81 +0.4 331,406 - PS417_01490 0.81 +0.5 331,441 - PS417_01490 0.86 +0.6 331,635 + +0.5 331,635 + -0.6 331,635 + +0.1 331,636 - +0.3 331,636 - -0.2 331,656 + +0.2 331,656 + -1.0 331,657 - +0.1 331,752 - PS417_01495 0.18 -1.5 331,809 + PS417_01495 0.26 -0.2 331,818 + PS417_01495 0.27 +0.4 331,818 + PS417_01495 0.27 +0.9 331,818 + PS417_01495 0.27 -0.5 331,818 + PS417_01495 0.27 -0.1 331,819 - PS417_01495 0.27 -0.2 331,819 - PS417_01495 0.27 -1.1 331,819 - PS417_01495 0.27 +0.6 331,926 + PS417_01495 0.42 +0.4 331,926 + PS417_01495 0.42 -1.1 331,927 - +1.7 331,927 - PS417_01495 0.42 -0.3 332,041 - PS417_01495 0.57 -0.7 332,041 - PS417_01495 0.57 -0.5 332,160 + PS417_01495 0.73 -0.5 332,160 + PS417_01495 0.73 -0.1 332,160 + PS417_01495 0.73 -0.6 332,160 + PS417_01495 0.73 +0.6 332,160 + PS417_01495 0.73 -1.1 332,161 - PS417_01495 0.73 -0.1 332,161 - PS417_01495 0.73 +0.4 332,161 - PS417_01495 0.73 -0.8 332,161 - PS417_01495 0.73 -0.8 332,488 + PS417_01500 0.14 -0.5
Or see this region's nucleotide sequence