Strain Fitness in Pseudomonas simiae WCS417 around PS417_14935
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,260,683 | - | PS417_14930 | 0.17 | -0.7 | |
| 3,260,728 | - | PS417_14930 | 0.21 | -0.7 | |
| 3,260,943 | + | PS417_14930 | 0.39 | +2.3 | |
| 3,260,943 | + | PS417_14930 | 0.39 | +0.3 | |
| 3,261,035 | - | PS417_14930 | 0.47 | +0.1 | |
| 3,261,035 | - | -0.7 | |||
| 3,261,213 | + | PS417_14930 | 0.62 | -0.1 | |
| 3,261,213 | + | +2.3 | |||
| 3,261,214 | - | PS417_14930 | 0.62 | +0.1 | |
| 3,261,382 | - | PS417_14930 | 0.77 | +0.3 | |
| 3,261,382 | - | PS417_14930 | 0.77 | -0.3 | |
| 3,261,382 | - | PS417_14930 | 0.77 | -0.2 | |
| 3,261,815 | - | PS417_14935 | 0.16 | -1.1 | |
| 3,261,943 | + | PS417_14935 | 0.32 | -0.1 | |
| 3,262,126 | + | PS417_14935 | 0.54 | -0.4 | |
| 3,263,044 | - | PS417_14940 | 0.46 | -0.3 |
Or see this region's nucleotide sequence