Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14700 and PS417_14710 are separated by 697 nucleotides PS417_14710 and PS417_14715 are separated by 34 nucleotides
PS417_14700: PS417_14700 - hypothetical protein, at 3,210,970 to 3,211,446
_14700
PS417_14710: PS417_14710 - isochorismatase, at 3,212,144 to 3,212,704
_14710
PS417_14715: PS417_14715 - 2-polyprenyl-6-methoxyphenol hydroxylase, at 3,212,739 to 3,214,226
_14715
Position (kb)
3212
3213 Strain fitness (log2 ratio)
-1
0
1 at 3211.250 kb on + strand, within PS417_14700 at 3211.698 kb on + strand at 3211.698 kb on + strand at 3211.698 kb on + strand at 3211.699 kb on - strand at 3211.776 kb on + strand at 3211.776 kb on + strand at 3211.776 kb on + strand at 3211.999 kb on - strand at 3212.024 kb on - strand at 3212.112 kb on + strand at 3212.112 kb on + strand at 3212.596 kb on - strand, within PS417_14710 at 3212.660 kb on + strand at 3212.673 kb on + strand at 3212.689 kb on - strand at 3212.762 kb on - strand at 3212.809 kb on + strand at 3212.810 kb on - strand at 3212.854 kb on + strand at 3212.855 kb on - strand at 3212.855 kb on - strand at 3212.855 kb on - strand at 3212.855 kb on - strand at 3212.910 kb on - strand, within PS417_14715 at 3212.910 kb on - strand, within PS417_14715 at 3213.229 kb on + strand, within PS417_14715 at 3213.229 kb on + strand, within PS417_14715 at 3213.292 kb on + strand, within PS417_14715 at 3213.312 kb on - strand, within PS417_14715 at 3213.416 kb on - strand, within PS417_14715 at 3213.416 kb on - strand, within PS417_14715 at 3213.441 kb on + strand, within PS417_14715 at 3213.571 kb on - strand, within PS417_14715 at 3213.639 kb on + strand, within PS417_14715
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 3,211,250 + PS417_14700 0.59 -0.0 3,211,698 + +0.3 3,211,698 + +0.7 3,211,698 + -1.2 3,211,699 - -0.0 3,211,776 + -0.3 3,211,776 + +0.9 3,211,776 + +0.4 3,211,999 - +0.2 3,212,024 - +0.2 3,212,112 + -0.6 3,212,112 + -0.5 3,212,596 - PS417_14710 0.81 -0.7 3,212,660 + -0.6 3,212,673 + -1.2 3,212,689 - -0.0 3,212,762 - -1.7 3,212,809 + +0.0 3,212,810 - +0.0 3,212,854 + +1.1 3,212,855 - -0.9 3,212,855 - +0.8 3,212,855 - +0.1 3,212,855 - -0.7 3,212,910 - PS417_14715 0.11 +0.0 3,212,910 - PS417_14715 0.11 +0.7 3,213,229 + PS417_14715 0.33 +0.4 3,213,229 + PS417_14715 0.33 -1.5 3,213,292 + PS417_14715 0.37 +0.1 3,213,312 - PS417_14715 0.39 +0.7 3,213,416 - PS417_14715 0.45 +0.7 3,213,416 - PS417_14715 0.45 +0.0 3,213,441 + PS417_14715 0.47 +1.2 3,213,571 - PS417_14715 0.56 -0.6 3,213,639 + PS417_14715 0.60 +0.2
Or see this region's nucleotide sequence