Strain Fitness in Pseudomonas simiae WCS417 around PS417_09195

Experiment: Bacitracin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 1 mg/ml
1,997,729	+				+0.2
1,997,826	+				+0.2
1,997,826	+				-0.2
1,997,871	-				+1.0
1,997,930	+				+0.1
1,997,977	+				+0.1
1,997,978	-				-0.8
1,997,978	-				-0.0
1,997,978	-				-0.8
1,997,991	-				+0.6
1,997,991	-				-0.2
1,997,994	+				-0.2
1,997,994	+				-1.1
1,997,995	-				+0.2
1,998,105	+		PS417_09190	0.18	+0.7
1,998,106	-		PS417_09190	0.18	-0.2
1,998,129	+				+0.1
1,998,141	-		PS417_09190	0.24	+0.8
1,998,167	-				+1.8
1,998,167	-		PS417_09190	0.28	+0.7
1,998,201	+		PS417_09190	0.33	-0.2
1,998,201	+		PS417_09190	0.33	-0.1
1,998,280	+		PS417_09190	0.45	-0.2
1,998,281	-		PS417_09190	0.45	+0.1
1,998,281	-		PS417_09190	0.45	+0.1
1,998,281	-		PS417_09190	0.45	+0.5
1,998,331	+		PS417_09190	0.52	+0.1
1,998,331	+		PS417_09190	0.52	-0.2
1,998,331	+		PS417_09190	0.52	-1.7
1,998,331	+		PS417_09190	0.52	-0.4
1,998,332	-		PS417_09190	0.53	+0.3
1,998,332	-		PS417_09190	0.53	-0.7
1,998,332	-		PS417_09190	0.53	+0.5
1,998,332	-		PS417_09190	0.53	-0.3
1,998,351	-		PS417_09190	0.55	+0.5
1,998,670	+				-0.8
1,998,671	-				+0.2
1,998,671	-				+1.1
1,998,671	-				+1.4
1,998,781	-		PS417_09195	0.13	+1.1
1,999,045	+		PS417_09195	0.56	+1.0
1,999,045	+		PS417_09195	0.56	+0.2
1,999,124	-		PS417_09195	0.68	+1.5
1,999,139	+		PS417_09195	0.71	+0.9
1,999,140	-		PS417_09195	0.71	-0.1
1,999,204	-		PS417_09195	0.81	+0.4
1,999,204	-		PS417_09195	0.81	+0.2
1,999,250	-		PS417_09195	0.89	-0.1
1,999,250	-		PS417_09195	0.89	+0.3
1,999,261	-				+0.1
1,999,261	-				-1.8
1,999,317	+				-0.6
1,999,318	-				+0.2
1,999,318	-				+0.3
1,999,327	+				+0.3
1,999,345	+				+0.0
1,999,345	+				+0.5
1,999,346	-				+1.0
1,999,418	-				+0.4
1,999,426	+				-0.2
1,999,426	+				-0.3
1,999,427	-				+0.5
1,999,446	-				+1.4
1,999,642	+		PS417_09200	0.20	-0.6
1,999,643	-		PS417_09200	0.20	-0.3
1,999,811	+		PS417_09200	0.38	+0.1
1,999,943	-		PS417_09200	0.52	+1.3
1,999,943	-		PS417_09200	0.52	-0.3