Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07090 and PS417_07095 are separated by 0 nucleotides PS417_07095 and PS417_07100 are separated by 36 nucleotides
PS417_07090: PS417_07090 - histidine kinase, at 1,568,949 to 1,570,334
_07090
PS417_07095: PS417_07095 - histidine kinase, at 1,570,335 to 1,571,156
_07095
PS417_07100: PS417_07100 - aminomethyltransferase, at 1,571,193 to 1,572,134
_07100
Position (kb)
1570
1571
1572 Strain fitness (log2 ratio)
-2
-1
0
1 at 1569.381 kb on - strand, within PS417_07090 at 1569.559 kb on + strand, within PS417_07090 at 1570.030 kb on + strand, within PS417_07090 at 1570.339 kb on + strand at 1570.340 kb on - strand at 1570.471 kb on + strand, within PS417_07095 at 1570.471 kb on + strand, within PS417_07095 at 1570.471 kb on + strand, within PS417_07095 at 1570.471 kb on + strand, within PS417_07095 at 1570.471 kb on + strand, within PS417_07095 at 1570.472 kb on - strand, within PS417_07095 at 1570.472 kb on - strand, within PS417_07095 at 1570.472 kb on - strand, within PS417_07095 at 1570.502 kb on - strand, within PS417_07095 at 1570.613 kb on + strand, within PS417_07095 at 1570.660 kb on + strand at 1570.769 kb on - strand, within PS417_07095 at 1570.804 kb on - strand, within PS417_07095 at 1570.889 kb on - strand, within PS417_07095 at 1570.889 kb on - strand, within PS417_07095 at 1570.889 kb on - strand, within PS417_07095 at 1570.889 kb on - strand, within PS417_07095 at 1571.121 kb on + strand at 1571.167 kb on + strand at 1571.168 kb on - strand at 1571.227 kb on + strand at 1571.227 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 1,569,381 - PS417_07090 0.31 +0.1 1,569,559 + PS417_07090 0.44 -0.1 1,570,030 + PS417_07090 0.78 +1.1 1,570,339 + -1.2 1,570,340 - -0.1 1,570,471 + PS417_07095 0.17 -0.6 1,570,471 + PS417_07095 0.17 -0.7 1,570,471 + PS417_07095 0.17 -0.9 1,570,471 + PS417_07095 0.17 -0.9 1,570,471 + PS417_07095 0.17 -0.7 1,570,472 - PS417_07095 0.17 +0.3 1,570,472 - PS417_07095 0.17 -0.7 1,570,472 - PS417_07095 0.17 -0.1 1,570,502 - PS417_07095 0.20 -0.0 1,570,613 + PS417_07095 0.34 +0.4 1,570,660 + +0.6 1,570,769 - PS417_07095 0.53 +1.0 1,570,804 - PS417_07095 0.57 -1.8 1,570,889 - PS417_07095 0.67 -0.8 1,570,889 - PS417_07095 0.67 -0.8 1,570,889 - PS417_07095 0.67 -0.3 1,570,889 - PS417_07095 0.67 -1.3 1,571,121 + -1.1 1,571,167 + -0.6 1,571,168 - -0.2 1,571,227 + -1.7 1,571,227 + -2.4
Or see this region's nucleotide sequence