Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28065 and PS417_28070 are separated by 70 nucleotides PS417_28070 and PS417_28075 are separated by 205 nucleotides
PS417_28065: PS417_28065 - transcriptional regulator PhoU, at 6,055,542 to 6,056,303
_28065
PS417_28070: PS417_28070 - phosphate ABC transporter ATP-binding protein, at 6,056,374 to 6,057,207
_28070
PS417_28075: PS417_28075 - phosphate ABC transporter permease, at 6,057,413 to 6,059,083
_28075
Position (kb)
6056
6057
6058 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7
8 at 6055.388 kb on - strand at 6055.388 kb on - strand at 6055.391 kb on - strand at 6055.459 kb on + strand at 6055.459 kb on + strand at 6055.543 kb on + strand at 6055.543 kb on + strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.547 kb on + strand at 6055.548 kb on - strand at 6055.577 kb on + strand at 6055.654 kb on + strand, within PS417_28065 at 6055.655 kb on - strand, within PS417_28065 at 6056.327 kb on + strand at 6056.396 kb on + strand at 6056.396 kb on + strand at 6056.397 kb on - strand at 6056.397 kb on - strand at 6056.471 kb on + strand, within PS417_28070 at 6056.471 kb on + strand, within PS417_28070 at 6056.471 kb on + strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.825 kb on + strand, within PS417_28070 at 6056.826 kb on - strand, within PS417_28070 at 6056.925 kb on - strand, within PS417_28070 at 6057.089 kb on + strand, within PS417_28070 at 6057.224 kb on + strand at 6057.414 kb on + strand at 6057.430 kb on + strand at 6057.431 kb on - strand at 6057.516 kb on + strand at 6057.567 kb on + strand at 6057.567 kb on + strand at 6057.567 kb on + strand at 6057.567 kb on + strand at 6057.571 kb on + strand at 6057.572 kb on - strand at 6057.807 kb on - strand, within PS417_28075 at 6057.973 kb on - strand, within PS417_28075 at 6057.973 kb on - strand, within PS417_28075 at 6058.077 kb on + strand, within PS417_28075 at 6058.089 kb on + strand, within PS417_28075 at 6058.090 kb on - strand, within PS417_28075
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 6,055,388 - +2.2 6,055,388 - -0.5 6,055,391 - +0.7 6,055,459 + +0.9 6,055,459 + -0.6 6,055,543 + -0.4 6,055,543 + +0.1 6,055,544 - -0.4 6,055,544 - +0.5 6,055,544 - -0.3 6,055,544 - +0.1 6,055,544 - +0.1 6,055,544 - +0.2 6,055,544 - +0.3 6,055,544 - +0.9 6,055,547 + +0.5 6,055,548 - +0.1 6,055,577 + +0.8 6,055,654 + PS417_28065 0.15 +7.4 6,055,655 - PS417_28065 0.15 +6.5 6,056,327 + +5.7 6,056,396 + +6.2 6,056,396 + +5.9 6,056,397 - +7.7 6,056,397 - +7.3 6,056,471 + PS417_28070 0.12 +7.5 6,056,471 + PS417_28070 0.12 +7.9 6,056,471 + PS417_28070 0.12 +8.3 6,056,472 - PS417_28070 0.12 +8.0 6,056,472 - PS417_28070 0.12 +7.8 6,056,472 - PS417_28070 0.12 +7.8 6,056,472 - PS417_28070 0.12 +7.8 6,056,472 - PS417_28070 0.12 +6.9 6,056,472 - PS417_28070 0.12 +7.8 6,056,825 + PS417_28070 0.54 +7.5 6,056,826 - PS417_28070 0.54 +7.8 6,056,925 - PS417_28070 0.66 +8.2 6,057,089 + PS417_28070 0.86 +7.5 6,057,224 + +7.2 6,057,414 + +5.0 6,057,430 + +5.7 6,057,431 - +0.7 6,057,516 + +7.8 6,057,567 + +7.5 6,057,567 + +8.4 6,057,567 + +7.4 6,057,567 + +8.4 6,057,571 + +7.6 6,057,572 - +2.2 6,057,807 - PS417_28075 0.24 +8.5 6,057,973 - PS417_28075 0.34 +8.3 6,057,973 - PS417_28075 0.34 +8.1 6,058,077 + PS417_28075 0.40 +7.7 6,058,089 + PS417_28075 0.40 +7.7 6,058,090 - PS417_28075 0.41 +8.3
Or see this region's nucleotide sequence