Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26515 and PS417_26520 are separated by 73 nucleotides PS417_26520 and PS417_26525 are separated by 221 nucleotides
PS417_26515: PS417_26515 - hypothetical protein, at 5,734,463 to 5,735,545
_26515
PS417_26520: PS417_26520 - amino acid ABC transporter substrate-binding protein, at 5,735,619 to 5,736,410
_26520
PS417_26525: PS417_26525 - DEAD/DEAH box helicase, at 5,736,632 to 5,738,512
_26525
Position (kb)
5735
5736
5737 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5734.653 kb on + strand, within PS417_26515 at 5734.853 kb on + strand, within PS417_26515 at 5734.854 kb on - strand, within PS417_26515 at 5734.889 kb on + strand, within PS417_26515 at 5734.890 kb on - strand, within PS417_26515 at 5735.049 kb on - strand, within PS417_26515 at 5735.337 kb on - strand, within PS417_26515 at 5735.658 kb on - strand at 5735.658 kb on - strand at 5735.658 kb on - strand at 5735.680 kb on - strand at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.722 kb on - strand, within PS417_26520 at 5735.728 kb on - strand, within PS417_26520 at 5736.031 kb on - strand, within PS417_26520 at 5736.342 kb on + strand at 5736.421 kb on - strand at 5736.421 kb on - strand at 5736.422 kb on + strand at 5736.423 kb on - strand at 5736.423 kb on - strand at 5736.423 kb on - strand at 5736.613 kb on - strand at 5736.613 kb on - strand at 5736.616 kb on + strand at 5736.627 kb on + strand at 5736.628 kb on - strand at 5736.666 kb on + strand at 5736.667 kb on - strand at 5736.693 kb on - strand at 5736.693 kb on - strand at 5736.703 kb on + strand at 5736.703 kb on + strand at 5736.704 kb on - strand at 5736.775 kb on + strand at 5736.781 kb on + strand at 5736.936 kb on - strand, within PS417_26525 at 5736.936 kb on - strand, within PS417_26525 at 5736.936 kb on - strand, within PS417_26525 at 5736.968 kb on - strand, within PS417_26525 at 5737.315 kb on - strand, within PS417_26525
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 5,734,653 + PS417_26515 0.18 -0.4 5,734,853 + PS417_26515 0.36 -1.1 5,734,854 - PS417_26515 0.36 -3.0 5,734,889 + PS417_26515 0.39 +0.2 5,734,890 - PS417_26515 0.39 -0.2 5,735,049 - PS417_26515 0.54 +0.5 5,735,337 - PS417_26515 0.81 -0.1 5,735,658 - -1.5 5,735,658 - +0.2 5,735,658 - +1.2 5,735,680 - +1.0 5,735,722 - PS417_26520 0.13 -2.7 5,735,722 - PS417_26520 0.13 -0.5 5,735,722 - PS417_26520 0.13 -0.1 5,735,722 - PS417_26520 0.13 -0.6 5,735,722 - PS417_26520 0.13 -0.6 5,735,722 - PS417_26520 0.13 -1.4 5,735,728 - PS417_26520 0.14 -1.0 5,736,031 - PS417_26520 0.52 -0.1 5,736,342 + +0.3 5,736,421 - -0.4 5,736,421 - +0.9 5,736,422 + +0.3 5,736,423 - -1.6 5,736,423 - -0.5 5,736,423 - -0.3 5,736,613 - +0.1 5,736,613 - -0.9 5,736,616 + -0.1 5,736,627 + +0.6 5,736,628 - -0.7 5,736,666 + +0.2 5,736,667 - -0.3 5,736,693 - -0.4 5,736,693 - -0.2 5,736,703 + +0.2 5,736,703 + -0.2 5,736,704 - -0.8 5,736,775 + -0.0 5,736,781 + -0.2 5,736,936 - PS417_26525 0.16 -0.5 5,736,936 - PS417_26525 0.16 -0.4 5,736,936 - PS417_26525 0.16 +0.0 5,736,968 - PS417_26525 0.18 -0.1 5,737,315 - PS417_26525 0.36 -0.9
Or see this region's nucleotide sequence