Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25195 and PS417_25200 overlap by 4 nucleotides PS417_25200 and PS417_25205 are separated by 110 nucleotides PS417_25205 and PS417_25210 are separated by 156 nucleotides
PS417_25195: PS417_25195 - exodeoxyribonuclease VII small subunit, at 5,461,115 to 5,461,357
_25195
PS417_25200: PS417_25200 - geranyl transferase, at 5,461,354 to 5,462,241
_25200
PS417_25205: PS417_25205 - 1-deoxy-D-xylulose-5-phosphate synthase, at 5,462,352 to 5,464,250
_25205
PS417_25210: PS417_25210 - TonB-dependent receptor, at 5,464,407 to 5,466,302
_25210
Position (kb)
5462
5463
5464
5465 Strain fitness (log2 ratio)
-1
0
1 at 5462.330 kb on + strand at 5462.332 kb on + strand at 5462.332 kb on + strand at 5462.336 kb on + strand at 5462.336 kb on + strand at 5462.336 kb on + strand at 5462.336 kb on + strand at 5462.336 kb on + strand at 5462.338 kb on + strand at 5464.278 kb on - strand at 5464.313 kb on + strand at 5464.313 kb on + strand at 5464.313 kb on + strand at 5464.314 kb on - strand at 5464.323 kb on + strand at 5464.323 kb on + strand at 5464.324 kb on - strand at 5464.327 kb on + strand at 5464.327 kb on + strand at 5464.327 kb on + strand at 5464.327 kb on + strand at 5464.327 kb on + strand at 5464.327 kb on + strand at 5464.328 kb on - strand at 5464.328 kb on - strand at 5464.328 kb on - strand at 5464.328 kb on - strand at 5464.740 kb on - strand, within PS417_25210 at 5464.767 kb on + strand, within PS417_25210 at 5465.027 kb on + strand, within PS417_25210 at 5465.028 kb on - strand, within PS417_25210 at 5465.028 kb on - strand, within PS417_25210 at 5465.028 kb on - strand, within PS417_25210 at 5465.028 kb on - strand, within PS417_25210 at 5465.157 kb on + strand, within PS417_25210 at 5465.158 kb on - strand, within PS417_25210 at 5465.218 kb on - strand, within PS417_25210 at 5465.226 kb on + strand, within PS417_25210 at 5465.226 kb on + strand, within PS417_25210 at 5465.226 kb on + strand, within PS417_25210 at 5465.226 kb on + strand, within PS417_25210 at 5465.227 kb on - strand, within PS417_25210 at 5465.250 kb on + strand, within PS417_25210
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 5,462,330 + +0.2 5,462,332 + +0.2 5,462,332 + -0.4 5,462,336 + +0.6 5,462,336 + +1.4 5,462,336 + -0.5 5,462,336 + -0.3 5,462,336 + -0.2 5,462,338 + +0.4 5,464,278 - +0.1 5,464,313 + -0.5 5,464,313 + -0.9 5,464,313 + -0.1 5,464,314 - -1.1 5,464,323 + +0.9 5,464,323 + -0.6 5,464,324 - +1.1 5,464,327 + -0.1 5,464,327 + +1.1 5,464,327 + +0.5 5,464,327 + +0.8 5,464,327 + -0.2 5,464,327 + +0.2 5,464,328 - -0.2 5,464,328 - +0.2 5,464,328 - -0.3 5,464,328 - +0.4 5,464,740 - PS417_25210 0.18 -0.4 5,464,767 + PS417_25210 0.19 -0.4 5,465,027 + PS417_25210 0.33 -0.2 5,465,028 - PS417_25210 0.33 +0.3 5,465,028 - PS417_25210 0.33 -0.2 5,465,028 - PS417_25210 0.33 +0.9 5,465,028 - PS417_25210 0.33 +0.1 5,465,157 + PS417_25210 0.40 -0.5 5,465,158 - PS417_25210 0.40 +0.8 5,465,218 - PS417_25210 0.43 +0.5 5,465,226 + PS417_25210 0.43 +0.6 5,465,226 + PS417_25210 0.43 -0.2 5,465,226 + PS417_25210 0.43 +1.1 5,465,226 + PS417_25210 0.43 -0.4 5,465,227 - PS417_25210 0.43 -1.1 5,465,250 + PS417_25210 0.44 -0.3
Or see this region's nucleotide sequence