Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22855 and PS417_22860 are separated by 60 nucleotides PS417_22860 and PS417_22865 are separated by 136 nucleotides PS417_22865 and PS417_22870 are separated by 16 nucleotides
PS417_22855: PS417_22855 - ssDNA exonuclease RecJ, at 4,953,160 to 4,954,869
_22855
PS417_22860: PS417_22860 - hypothetical protein, at 4,954,930 to 4,955,472
_22860
PS417_22865: PS417_22865 - CoA-transferase, at 4,955,609 to 4,956,802
_22865
PS417_22870: PS417_22870 - lipoprotein, at 4,956,819 to 4,957,682
_22870
Position (kb) 4955
4956
4957 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4954.656 kb on + strand, within PS417_22855 at 4955.017 kb on + strand, within PS417_22860 at 4955.017 kb on + strand, within PS417_22860 at 4955.017 kb on + strand, within PS417_22860 at 4955.018 kb on - strand, within PS417_22860 at 4955.093 kb on - strand, within PS417_22860 at 4955.169 kb on + strand, within PS417_22860 at 4955.282 kb on - strand, within PS417_22860 at 4955.282 kb on - strand, within PS417_22860 at 4955.321 kb on + strand, within PS417_22860 at 4955.322 kb on - strand, within PS417_22860 at 4955.333 kb on + strand, within PS417_22860 at 4955.409 kb on - strand, within PS417_22860 at 4955.409 kb on - strand, within PS417_22860 at 4955.563 kb on - strand at 4955.563 kb on - strand at 4955.567 kb on + strand at 4955.771 kb on + strand, within PS417_22865 at 4955.771 kb on + strand, within PS417_22865 at 4955.772 kb on - strand, within PS417_22865 at 4955.772 kb on - strand, within PS417_22865 at 4955.871 kb on + strand, within PS417_22865 at 4955.872 kb on - strand, within PS417_22865 at 4955.979 kb on + strand, within PS417_22865 at 4955.980 kb on - strand, within PS417_22865 at 4956.065 kb on + strand, within PS417_22865 at 4956.065 kb on + strand, within PS417_22865 at 4956.065 kb on + strand, within PS417_22865 at 4956.066 kb on - strand, within PS417_22865 at 4956.066 kb on - strand, within PS417_22865 at 4956.068 kb on - strand, within PS417_22865 at 4956.068 kb on - strand, within PS417_22865 at 4956.218 kb on + strand, within PS417_22865 at 4956.219 kb on - strand, within PS417_22865 at 4956.219 kb on - strand, within PS417_22865 at 4956.563 kb on + strand, within PS417_22865 at 4956.564 kb on - strand, within PS417_22865 at 4956.564 kb on - strand, within PS417_22865 at 4956.817 kb on + strand at 4956.818 kb on - strand at 4957.125 kb on + strand, within PS417_22870 at 4957.282 kb on - strand, within PS417_22870 at 4957.448 kb on + strand, within PS417_22870 at 4957.594 kb on + strand, within PS417_22870 at 4957.605 kb on + strand at 4957.642 kb on - strand at 4957.642 kb on - strand at 4957.665 kb on + strand at 4957.756 kb on + strand at 4957.757 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 4,954,656 + PS417_22855 0.87 +0.1 4,955,017 + PS417_22860 0.16 +0.1 4,955,017 + PS417_22860 0.16 -0.6 4,955,017 + PS417_22860 0.16 -0.9 4,955,018 - PS417_22860 0.16 +0.3 4,955,093 - PS417_22860 0.30 +0.2 4,955,169 + PS417_22860 0.44 -0.4 4,955,282 - PS417_22860 0.65 +0.2 4,955,282 - PS417_22860 0.65 -0.3 4,955,321 + PS417_22860 0.72 +0.3 4,955,322 - PS417_22860 0.72 +0.4 4,955,333 + PS417_22860 0.74 +0.3 4,955,409 - PS417_22860 0.88 -0.9 4,955,409 - PS417_22860 0.88 +0.3 4,955,563 - -1.1 4,955,563 - +0.0 4,955,567 + +0.5 4,955,771 + PS417_22865 0.14 +1.2 4,955,771 + PS417_22865 0.14 -0.1 4,955,772 - PS417_22865 0.14 +0.5 4,955,772 - PS417_22865 0.14 +1.9 4,955,871 + PS417_22865 0.22 +1.6 4,955,872 - PS417_22865 0.22 +0.2 4,955,979 + PS417_22865 0.31 +0.7 4,955,980 - PS417_22865 0.31 -0.7 4,956,065 + PS417_22865 0.38 +0.1 4,956,065 + PS417_22865 0.38 +1.3 4,956,065 + PS417_22865 0.38 -0.4 4,956,066 - PS417_22865 0.38 -0.0 4,956,066 - PS417_22865 0.38 +1.5 4,956,068 - PS417_22865 0.38 +0.9 4,956,068 - PS417_22865 0.38 -0.7 4,956,218 + PS417_22865 0.51 +1.3 4,956,219 - PS417_22865 0.51 +0.2 4,956,219 - PS417_22865 0.51 -0.5 4,956,563 + PS417_22865 0.80 -0.9 4,956,564 - PS417_22865 0.80 -0.4 4,956,564 - PS417_22865 0.80 -0.6 4,956,817 + -0.8 4,956,818 - -0.4 4,957,125 + PS417_22870 0.35 -1.8 4,957,282 - PS417_22870 0.54 +0.7 4,957,448 + PS417_22870 0.73 -0.1 4,957,594 + PS417_22870 0.90 +0.2 4,957,605 + +0.3 4,957,642 - -0.5 4,957,642 - +0.2 4,957,665 + +0.3 4,957,756 + -1.0 4,957,757 - +0.7
Or see this region's nucleotide sequence