Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22595 and PS417_22600 overlap by 4 nucleotides PS417_22600 and PS417_22605 are separated by 7 nucleotides
PS417_22595: PS417_22595 - hypothetical protein, at 4,892,741 to 4,893,910
_22595
PS417_22600: PS417_22600 - ATPase AAA, at 4,893,907 to 4,894,902
_22600
PS417_22605: PS417_22605 - membrane protein, at 4,894,910 to 4,896,241
_22605
Position (kb)
4893
4894
4895 Strain fitness (log2 ratio)
-1
0
1
2 at 4892.936 kb on - strand, within PS417_22595 at 4893.022 kb on - strand, within PS417_22595 at 4893.225 kb on - strand, within PS417_22595 at 4893.252 kb on - strand, within PS417_22595 at 4893.252 kb on - strand, within PS417_22595 at 4893.441 kb on - strand, within PS417_22595 at 4893.906 kb on + strand at 4893.907 kb on - strand at 4894.196 kb on + strand, within PS417_22600 at 4894.198 kb on + strand, within PS417_22600 at 4894.242 kb on - strand, within PS417_22600 at 4894.410 kb on + strand, within PS417_22600 at 4894.410 kb on + strand, within PS417_22600 at 4894.410 kb on + strand, within PS417_22600 at 4894.415 kb on - strand, within PS417_22600 at 4894.541 kb on + strand, within PS417_22600 at 4894.541 kb on + strand, within PS417_22600 at 4894.542 kb on - strand, within PS417_22600 at 4894.542 kb on - strand, within PS417_22600 at 4894.542 kb on - strand at 4894.542 kb on - strand, within PS417_22600 at 4894.542 kb on - strand, within PS417_22600 at 4894.634 kb on - strand, within PS417_22600 at 4894.816 kb on - strand at 4894.948 kb on - strand at 4894.948 kb on - strand at 4895.038 kb on - strand at 4895.151 kb on + strand, within PS417_22605 at 4895.152 kb on - strand, within PS417_22605 at 4895.152 kb on - strand, within PS417_22605 at 4895.193 kb on + strand, within PS417_22605 at 4895.194 kb on - strand, within PS417_22605 at 4895.194 kb on - strand, within PS417_22605 at 4895.194 kb on - strand, within PS417_22605 at 4895.194 kb on - strand, within PS417_22605 at 4895.199 kb on + strand, within PS417_22605 at 4895.361 kb on + strand, within PS417_22605 at 4895.427 kb on + strand, within PS417_22605 at 4895.442 kb on + strand, within PS417_22605 at 4895.726 kb on + strand, within PS417_22605 at 4895.727 kb on - strand, within PS417_22605 at 4895.727 kb on - strand, within PS417_22605 at 4895.813 kb on - strand, within PS417_22605 at 4895.841 kb on + strand, within PS417_22605 at 4895.841 kb on + strand, within PS417_22605 at 4895.841 kb on + strand, within PS417_22605 at 4895.841 kb on + strand, within PS417_22605 at 4895.843 kb on + strand, within PS417_22605 at 4895.843 kb on + strand, within PS417_22605 at 4895.843 kb on + strand, within PS417_22605 at 4895.843 kb on + strand, within PS417_22605 at 4895.843 kb on + strand, within PS417_22605 at 4895.843 kb on + strand, within PS417_22605 at 4895.844 kb on - strand, within PS417_22605 at 4895.844 kb on - strand, within PS417_22605
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 4,892,936 - PS417_22595 0.17 -1.0 4,893,022 - PS417_22595 0.24 -1.2 4,893,225 - PS417_22595 0.41 -0.2 4,893,252 - PS417_22595 0.44 +0.0 4,893,252 - PS417_22595 0.44 +0.6 4,893,441 - PS417_22595 0.60 +0.4 4,893,906 + -0.4 4,893,907 - -0.2 4,894,196 + PS417_22600 0.29 -0.1 4,894,198 + PS417_22600 0.29 +0.0 4,894,242 - PS417_22600 0.34 -0.2 4,894,410 + PS417_22600 0.51 +0.3 4,894,410 + PS417_22600 0.51 -0.7 4,894,410 + PS417_22600 0.51 +0.6 4,894,415 - PS417_22600 0.51 -0.2 4,894,541 + PS417_22600 0.64 -0.3 4,894,541 + PS417_22600 0.64 -0.1 4,894,542 - PS417_22600 0.64 -0.6 4,894,542 - PS417_22600 0.64 -1.0 4,894,542 - +0.3 4,894,542 - PS417_22600 0.64 -1.7 4,894,542 - PS417_22600 0.64 +0.4 4,894,634 - PS417_22600 0.73 +0.3 4,894,816 - +0.2 4,894,948 - -0.3 4,894,948 - +1.1 4,895,038 - -0.4 4,895,151 + PS417_22605 0.18 -0.4 4,895,152 - PS417_22605 0.18 -0.9 4,895,152 - PS417_22605 0.18 -0.9 4,895,193 + PS417_22605 0.21 +0.3 4,895,194 - PS417_22605 0.21 -1.5 4,895,194 - PS417_22605 0.21 +1.3 4,895,194 - PS417_22605 0.21 -0.1 4,895,194 - PS417_22605 0.21 -0.2 4,895,199 + PS417_22605 0.22 -1.1 4,895,361 + PS417_22605 0.34 +0.1 4,895,427 + PS417_22605 0.39 -0.8 4,895,442 + PS417_22605 0.40 -0.3 4,895,726 + PS417_22605 0.61 -0.2 4,895,727 - PS417_22605 0.61 +0.1 4,895,727 - PS417_22605 0.61 -0.7 4,895,813 - PS417_22605 0.68 -0.9 4,895,841 + PS417_22605 0.70 -1.5 4,895,841 + PS417_22605 0.70 +0.2 4,895,841 + PS417_22605 0.70 +0.9 4,895,841 + PS417_22605 0.70 +0.2 4,895,843 + PS417_22605 0.70 -0.0 4,895,843 + PS417_22605 0.70 +1.9 4,895,843 + PS417_22605 0.70 -0.2 4,895,843 + PS417_22605 0.70 +0.5 4,895,843 + PS417_22605 0.70 -0.2 4,895,843 + PS417_22605 0.70 -0.0 4,895,844 - PS417_22605 0.70 +0.3 4,895,844 - PS417_22605 0.70 -1.0
Or see this region's nucleotide sequence