Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21800 and PS417_21805 are separated by 54 nucleotides PS417_21805 and PS417_21810 are separated by 93 nucleotides PS417_21810 and PS417_21815 are separated by 223 nucleotides
PS417_21800: PS417_21800 - MFS transporter, at 4,733,906 to 4,735,075
_21800
PS417_21805: PS417_21805 - hypothetical protein, at 4,735,130 to 4,736,077
_21805
PS417_21810: PS417_21810 - hypothetical protein, at 4,736,171 to 4,736,536
_21810
PS417_21815: PS417_21815 - amidase, at 4,736,760 to 4,738,262
_21815
Position (kb)
4735
4736
4737 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 4734.315 kb on - strand, within PS417_21800 at 4734.328 kb on + strand, within PS417_21800 at 4734.576 kb on - strand at 4734.584 kb on + strand at 4734.585 kb on - strand at 4734.687 kb on - strand, within PS417_21800 at 4734.687 kb on - strand, within PS417_21800 at 4734.841 kb on + strand, within PS417_21800 at 4734.841 kb on + strand, within PS417_21800 at 4734.842 kb on - strand, within PS417_21800 at 4734.842 kb on - strand at 4734.902 kb on + strand, within PS417_21800 at 4734.905 kb on + strand, within PS417_21800 at 4734.962 kb on + strand at 4734.998 kb on + strand at 4734.998 kb on + strand at 4734.998 kb on + strand at 4734.999 kb on - strand at 4734.999 kb on - strand at 4735.099 kb on - strand at 4735.099 kb on - strand at 4735.099 kb on - strand at 4735.099 kb on - strand at 4735.182 kb on - strand at 4735.188 kb on + strand at 4735.189 kb on - strand at 4735.189 kb on - strand at 4735.286 kb on - strand, within PS417_21805 at 4735.323 kb on - strand, within PS417_21805 at 4735.323 kb on - strand, within PS417_21805 at 4735.408 kb on - strand, within PS417_21805 at 4735.408 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.776 kb on - strand, within PS417_21805 at 4735.833 kb on - strand, within PS417_21805 at 4735.848 kb on - strand, within PS417_21805 at 4735.875 kb on - strand, within PS417_21805 at 4735.937 kb on + strand, within PS417_21805 at 4735.938 kb on - strand, within PS417_21805 at 4736.076 kb on - strand at 4736.136 kb on - strand at 4736.535 kb on - strand at 4736.535 kb on - strand at 4736.854 kb on + strand at 4736.855 kb on - strand at 4736.855 kb on - strand at 4736.855 kb on - strand at 4736.883 kb on + strand at 4736.884 kb on - strand at 4736.884 kb on - strand at 4736.935 kb on + strand, within PS417_21815 at 4736.936 kb on - strand, within PS417_21815
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 4,734,315 - PS417_21800 0.35 +0.7 4,734,328 + PS417_21800 0.36 +0.4 4,734,576 - +0.9 4,734,584 + +1.9 4,734,585 - +1.3 4,734,687 - PS417_21800 0.67 +1.3 4,734,687 - PS417_21800 0.67 -0.5 4,734,841 + PS417_21800 0.80 +0.4 4,734,841 + PS417_21800 0.80 -0.1 4,734,842 - PS417_21800 0.80 +0.9 4,734,842 - +2.9 4,734,902 + PS417_21800 0.85 +1.4 4,734,905 + PS417_21800 0.85 -0.5 4,734,962 + +0.2 4,734,998 + +0.9 4,734,998 + -0.1 4,734,998 + +4.4 4,734,999 - -0.0 4,734,999 - +0.0 4,735,099 - +0.5 4,735,099 - -0.9 4,735,099 - -0.3 4,735,099 - +0.8 4,735,182 - -1.3 4,735,188 + -0.5 4,735,189 - +1.3 4,735,189 - -0.2 4,735,286 - PS417_21805 0.16 -0.6 4,735,323 - PS417_21805 0.20 +0.7 4,735,323 - PS417_21805 0.20 +0.8 4,735,408 - PS417_21805 0.29 +0.5 4,735,408 - PS417_21805 0.29 +1.1 4,735,776 - PS417_21805 0.68 +3.4 4,735,776 - PS417_21805 0.68 +0.1 4,735,776 - PS417_21805 0.68 -0.1 4,735,776 - PS417_21805 0.68 +0.2 4,735,833 - PS417_21805 0.74 -0.1 4,735,848 - PS417_21805 0.76 +0.1 4,735,875 - PS417_21805 0.79 -0.0 4,735,937 + PS417_21805 0.85 +0.4 4,735,938 - PS417_21805 0.85 +0.7 4,736,076 - +1.1 4,736,136 - +0.0 4,736,535 - +0.6 4,736,535 - -0.5 4,736,854 + -0.3 4,736,855 - +1.5 4,736,855 - +0.6 4,736,855 - -0.4 4,736,883 + -1.2 4,736,884 - -1.3 4,736,884 - -0.3 4,736,935 + PS417_21815 0.12 -0.2 4,736,936 - PS417_21815 0.12 +1.9
Or see this region's nucleotide sequence