Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02150 and PS417_02155 are separated by 243 nucleotides PS417_02155 and PS417_02160 are separated by 278 nucleotides PS417_02160 and PS417_02165 overlap by 4 nucleotides PS417_02165 and PS417_02170 overlap by 4 nucleotides
PS417_02150: PS417_02150 - potassium/proton antiporter, at 480,610 to 482,352
_02150
PS417_02155: PS417_02155 - chemotaxis protein, at 482,596 to 484,221
_02155
PS417_02160: PS417_02160 - hypothetical protein, at 484,500 to 484,730
_02160
PS417_02165: PS417_02165 - ZapA, at 484,727 to 485,020
_02165
PS417_02170: PS417_02170 - acyl-CoA dehydrogenase, at 485,017 to 486,819
_02170
Position (kb) 482
483
484
485 Strain fitness (log2 ratio) -1
0
1
2 at 481.689 kb on - strand, within PS417_02150 at 481.689 kb on - strand, within PS417_02150 at 481.963 kb on - strand, within PS417_02150 at 482.187 kb on + strand at 482.251 kb on + strand at 482.252 kb on - strand at 482.253 kb on + strand at 482.253 kb on + strand at 482.254 kb on - strand at 482.254 kb on - strand at 482.359 kb on + strand at 482.420 kb on + strand at 482.598 kb on - strand at 483.583 kb on - strand, within PS417_02155 at 483.848 kb on + strand, within PS417_02155 at 483.869 kb on + strand, within PS417_02155 at 483.878 kb on + strand, within PS417_02155 at 484.201 kb on - strand at 484.206 kb on + strand at 484.209 kb on + strand at 484.210 kb on - strand at 484.303 kb on - strand at 484.381 kb on + strand at 484.683 kb on - strand, within PS417_02160 at 484.859 kb on + strand, within PS417_02165 at 484.859 kb on + strand, within PS417_02165 at 484.884 kb on + strand, within PS417_02165 at 484.885 kb on - strand, within PS417_02165 at 485.096 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 481,689 - PS417_02150 0.62 -0.5 481,689 - PS417_02150 0.62 +0.4 481,963 - PS417_02150 0.78 +0.1 482,187 + -0.0 482,251 + +0.1 482,252 - +2.5 482,253 + -1.1 482,253 + -0.2 482,254 - +1.1 482,254 - -0.5 482,359 + -0.6 482,420 + -0.5 482,598 - -0.5 483,583 - PS417_02155 0.61 -0.9 483,848 + PS417_02155 0.77 -0.3 483,869 + PS417_02155 0.78 -1.4 483,878 + PS417_02155 0.79 -1.0 484,201 - +1.0 484,206 + +0.0 484,209 + +1.5 484,210 - +0.1 484,303 - -0.3 484,381 + -0.5 484,683 - PS417_02160 0.79 -0.3 484,859 + PS417_02165 0.45 -0.1 484,859 + PS417_02165 0.45 +0.1 484,884 + PS417_02165 0.53 +1.0 484,885 - PS417_02165 0.54 -0.1 485,096 - -0.2
Or see this region's nucleotide sequence