Experiment: Phosphomycin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_19805 and PS417_19810 are separated by 16 nucleotides PS417_19810 and PS417_19815 are separated by 131 nucleotides PS417_19815 and PS417_19820 are separated by 7 nucleotides
PS417_19805: PS417_19805 - flagellar M-ring protein FliF, at 4,299,460 to 4,301,238
_19805
PS417_19810: PS417_19810 - flagellar hook-basal body protein FliE, at 4,301,255 to 4,301,584
_19810
PS417_19815: PS417_19815 - Fis family transcriptional regulator, at 4,301,716 to 4,303,092
_19815
PS417_19820: PS417_19820 - histidine kinase, at 4,303,100 to 4,304,311
_19820
Position (kb)
4301
4302
4303
4304 Strain fitness (log2 ratio)
-2
-1
0
1 at 4301.244 kb on - strand at 4301.283 kb on + strand at 4301.303 kb on - strand, within PS417_19810 at 4301.303 kb on - strand, within PS417_19810 at 4301.634 kb on + strand at 4301.634 kb on + strand at 4301.635 kb on - strand at 4301.645 kb on + strand at 4301.718 kb on - strand at 4301.718 kb on - strand at 4301.728 kb on + strand at 4301.729 kb on - strand at 4301.729 kb on - strand at 4301.732 kb on + strand at 4301.732 kb on + strand at 4301.733 kb on - strand at 4301.733 kb on - strand at 4301.733 kb on - strand at 4302.585 kb on - strand, within PS417_19815 at 4303.008 kb on - strand at 4303.092 kb on + strand at 4303.102 kb on - strand at 4303.256 kb on - strand, within PS417_19820 at 4303.347 kb on + strand, within PS417_19820 at 4303.348 kb on - strand, within PS417_19820 at 4303.588 kb on + strand, within PS417_19820 at 4303.692 kb on + strand, within PS417_19820 at 4303.692 kb on + strand, within PS417_19820 at 4303.693 kb on - strand, within PS417_19820 at 4303.693 kb on - strand, within PS417_19820 at 4303.693 kb on - strand, within PS417_19820
Per-strain Table
Position Strand Gene LocusTag Fraction Phosphomycin 0.003 mg/ml remove 4,301,244 - -2.6 4,301,283 + -0.3 4,301,303 - PS417_19810 0.15 -0.3 4,301,303 - PS417_19810 0.15 -0.0 4,301,634 + +0.1 4,301,634 + -1.2 4,301,635 - -1.6 4,301,645 + -2.7 4,301,718 - +1.7 4,301,718 - +0.1 4,301,728 + -1.3 4,301,729 - -0.4 4,301,729 - +0.3 4,301,732 + -1.1 4,301,732 + +0.3 4,301,733 - -1.8 4,301,733 - +0.8 4,301,733 - +0.1 4,302,585 - PS417_19815 0.63 -0.9 4,303,008 - +1.7 4,303,092 + +0.6 4,303,102 - -0.5 4,303,256 - PS417_19820 0.13 +0.2 4,303,347 + PS417_19820 0.20 +0.5 4,303,348 - PS417_19820 0.20 +0.2 4,303,588 + PS417_19820 0.40 +1.0 4,303,692 + PS417_19820 0.49 +0.0 4,303,692 + PS417_19820 0.49 -0.6 4,303,693 - PS417_19820 0.49 -0.2 4,303,693 - PS417_19820 0.49 -0.4 4,303,693 - PS417_19820 0.49 +0.6
Or see this region's nucleotide sequence